RNA–Protein interactions for RNA: ENST00000492367.1

NUCB1-212, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 1,515 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-212ENST00000492367 FBLN2P98095 1184 aa30.21■■■□□ 2.43
NUCB1-212ENST00000492367 IQGAP2Q13576 1575 aa30.21■■■□□ 2.43
NUCB1-212ENST00000492367 CHD1O14646 1710 aa30.2■■■□□ 2.43
NUCB1-212ENST00000492367 EFCAB5A4FU69 1503 aa30.19■■■□□ 2.42
NUCB1-212ENST00000492367 KIAA0586Q9BVV6 1533 aa30.18■■■□□ 2.42
NUCB1-212ENST00000492367 RANGAP1P46060 587 aaPredicted RBP30.17■■■□□ 2.42
NUCB1-212ENST00000492367 NUP160Q12769 1436 aa30.15■■■□□ 2.42
NUCB1-212ENST00000492367 CEP170Q5SW79 1584 aa30.15■■■□□ 2.42
NUCB1-212ENST00000492367 ARHGAP35Q9NRY4 1499 aa30.14■■■□□ 2.41
NUCB1-212ENST00000492367 ARAP1Q96P48 1450 aa30.07■■■□□ 2.4
NUCB1-212ENST00000492367 SAMD9Q5K651 1589 aa30.07■■■□□ 2.4
NUCB1-212ENST00000492367 VPS8Q8N3P4 1428 aa30.06■■■□□ 2.4
NUCB1-212ENST00000492367 UGGT2Q9NYU1 1516 aa30.05■■■□□ 2.4
NUCB1-212ENST00000492367 FHOD3Q2V2M9 1422 aa29.91■■■□□ 2.38
NUCB1-212ENST00000492367 KIAA0556O60303 1618 aa29.9■■■□□ 2.38
NUCB1-212ENST00000492367 FMN1Q68DA7 1419 aa29.88■■■□□ 2.37
NUCB1-212ENST00000492367 P3H3Q8IVL6 736 aa29.86■■■□□ 2.37
NUCB1-212ENST00000492367 CARMIL2Q6F5E8 1435 aa29.86■■■□□ 2.37
NUCB1-212ENST00000492367 CLASP1Q7Z460 1538 aa29.85■■■□□ 2.37
NUCB1-212ENST00000492367 DISP1Q96F81 1524 aa29.84■■■□□ 2.37
NUCB1-212ENST00000492367 JPH4Q96JJ6 628 aa29.84■■■□□ 2.37
NUCB1-212ENST00000492367 SHROOM2Q13796 1616 aa29.83■■■□□ 2.37
NUCB1-212ENST00000492367 APLP2Q06481 763 aa29.79■■■□□ 2.36
NUCB1-212ENST00000492367 PCF11O94913 1555 aaKnown RBP29.76■■■□□ 2.35
NUCB1-212ENST00000492367 FYCO1Q9BQS8 1478 aa29.75■■■□□ 2.35
NUCB1-212ENST00000492367 CASKIN1Q8WXD9 1431 aa29.74■■■□□ 2.35
NUCB1-212ENST00000492367 PRG4Q92954 1404 aaPredicted RBP29.72■■■□□ 2.35
NUCB1-212ENST00000492367 OSCARQ8IYS5 282 aa29.67■■■□□ 2.34
NUCB1-212ENST00000492367 MAP3K1Q13233 1512 aa29.66■■■□□ 2.34
NUCB1-212ENST00000492367 HECW1Q76N89 1606 aa29.64■■■□□ 2.34
NUCB1-212ENST00000492367 CFAP43Q8NDM7 1665 aa29.61■■■□□ 2.33
NUCB1-212ENST00000492367 TIAM1Q13009 1591 aa29.6■■■□□ 2.33
NUCB1-212ENST00000492367 RAPGEF6Q8TEU7 1601 aa29.58■■■□□ 2.33
NUCB1-212ENST00000492367 ATP1B4Q9UN42 357 aaPredicted RBP29.56■■■□□ 2.32
NUCB1-212ENST00000492367 CCDC18Q5T9S5 1454 aa29.55■■■□□ 2.32
NUCB1-212ENST00000492367 PTPRGP23470 1445 aa29.52■■■□□ 2.32
NUCB1-212ENST00000492367 TTBK1Q5TCY1 1321 aaPredicted RBP29.49■■■□□ 2.31
NUCB1-212ENST00000492367 ERCC6L2Q5T890 1561 aa29.49■■■□□ 2.31
NUCB1-212ENST00000492367 LRRIQ1Q96JM4 1722 aa29.48■■■□□ 2.31
NUCB1-212ENST00000492367 PPARGC1BQ86YN6 1023 aaKnown RBP29.48■■■□□ 2.31
NUCB1-212ENST00000492367 ABCA8O94911 1581 aa29.47■■■□□ 2.31
NUCB1-212ENST00000492367 EPRSP07814 1512 aaKnown RBP29.44■■■□□ 2.3
NUCB1-212ENST00000492367 PLB1Q6P1J6 1458 aa29.44■■■□□ 2.3
NUCB1-212ENST00000492367 LRRC9Q6ZRR7 1453 aa29.42■■■□□ 2.3
NUCB1-212ENST00000492367 NUP153P49790 1475 aaKnown RBP29.41■■■□□ 2.3
NUCB1-212ENST00000492367 TRIM26Q12899 539 aaPredicted RBP29.41■■■□□ 2.3
NUCB1-212ENST00000492367 KANK4Q5T7N3 995 aaPredicted RBP29.37■■■□□ 2.29
NUCB1-212ENST00000492367 UACAQ9BZF9 1416 aa29.36■■■□□ 2.29
NUCB1-212ENST00000492367 EHBP1L1Q8N3D4 1523 aa29.35■■■□□ 2.29
NUCB1-212ENST00000492367 CDK13Q14004 1512 aaKnown RBP29.34■■■□□ 2.29
NUCB1-212ENST00000492367 MTUS2Q5JR59 1369 aa29.33■■■□□ 2.29
NUCB1-212ENST00000492367 ABCC2Q92887 1545 aa29.32■■■□□ 2.28
NUCB1-212ENST00000492367 CDK11AQ9UQ88 783 aaPredicted RBP29.29■■■□□ 2.28
NUCB1-212ENST00000492367 UHRF1BP1LA0JNW5 1464 aa29.28■■■□□ 2.28
NUCB1-212ENST00000492367 SUPT6HQ7KZ85 1726 aaKnown RBP29.25■■■□□ 2.27
NUCB1-212ENST00000492367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.24■■■□□ 2.27
NUCB1-212ENST00000492367 HNRNPUL2Q1KMD3 747 aaKnown RBP29.24■■■□□ 2.27
NUCB1-212ENST00000492367 ARHGEF11O15085 1522 aa29.2■■■□□ 2.27
NUCB1-212ENST00000492367 ATP10BO94823 1461 aa29.2■■■□□ 2.27
NUCB1-212ENST00000492367 ARID3CA6NKF2 412 aa29.2■■■□□ 2.27
NUCB1-212ENST00000492367 MAGI3Q5TCQ9 1506 aa29.2■■■□□ 2.26
NUCB1-212ENST00000492367 PCGF6Q9BYE7 350 aa29.19■■■□□ 2.26
NUCB1-212ENST00000492367 TROQ12816 1431 aaPredicted RBP29.14■■■□□ 2.26
NUCB1-212ENST00000492367 NCOA2Q15596 1464 aa29.12■■■□□ 2.25
NUCB1-212ENST00000492367 KDM5BQ9UGL1 1544 aa29.12■■■□□ 2.25
NUCB1-212ENST00000492367 ADCY10Q96PN6 1610 aa29.11■■■□□ 2.25
NUCB1-212ENST00000492367 ZCCHC11Q5TAX3 1644 aaKnown RBP29.11■■■□□ 2.25
NUCB1-212ENST00000492367 PLEKHD1A6NEE1 506 aa29.1■■■□□ 2.25
NUCB1-212ENST00000492367 RIMBP3CA6NJZ7 1639 aa29.09■■■□□ 2.25
NUCB1-212ENST00000492367 RIMBP3BA6NNM3 1639 aa29.09■■■□□ 2.25
NUCB1-212ENST00000492367 RIMBP3Q9UFD9 1639 aa29.09■■■□□ 2.25
NUCB1-212ENST00000492367 RRBP1Q9P2E9 1410 aaKnown RBP29.08■■■□□ 2.25
NUCB1-212ENST00000492367 PHLDB1Q86UU1 1377 aa29.06■■■□□ 2.24
NUCB1-212ENST00000492367 KIF14Q15058 1648 aa29.05■■■□□ 2.24
NUCB1-212ENST00000492367 MYOM3Q5VTT5 1437 aa29.02■■■□□ 2.24
NUCB1-212ENST00000492367 CCNB3Q8WWL7 1395 aa29.01■■■□□ 2.23
NUCB1-212ENST00000492367 ITSN2Q9NZM3 1697 aa28.97■■■□□ 2.23
NUCB1-212ENST00000492367 FGD6Q6ZV73 1430 aa28.96■■■□□ 2.23
NUCB1-212ENST00000492367 NPM1P06748 294 aaKnown RBP eCLIP28.94■■■□□ 2.22
NUCB1-212ENST00000492367 MIA2Q96PC5 1412 aa28.92■■■□□ 2.22
NUCB1-212ENST00000492367 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.92■■■□□ 2.222e-6■■□□□ 13.2
NUCB1-212ENST00000492367 ABCC10Q5T3U5 1492 aa28.88■■■□□ 2.21
NUCB1-212ENST00000492367 PTPN23Q9H3S7 1636 aa28.87■■■□□ 2.21
NUCB1-212ENST00000492367 WDR7Q9Y4E6 1490 aa28.86■■■□□ 2.21
NUCB1-212ENST00000492367 CYB5RLQ6IPT4 315 aa28.84■■■□□ 2.21
NUCB1-212ENST00000492367 TCOF1Q13428 1488 aaKnown RBP28.83■■■□□ 2.21
NUCB1-212ENST00000492367 CDC42BPAQ5VT25 1732 aa28.82■■■□□ 2.2
NUCB1-212ENST00000492367 FAM50AQ14320 339 aaKnown RBP28.82■■■□□ 2.2
NUCB1-212ENST00000492367 GPATCH8Q9UKJ3 1502 aaKnown RBP28.81■■■□□ 2.2
NUCB1-212ENST00000492367 ASXL2Q76L83 1435 aa28.8■■■□□ 2.2
NUCB1-212ENST00000492367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.79■■■□□ 2.24e-6■■■□□ 15.9
NUCB1-212ENST00000492367 PREX2Q70Z35 1606 aa28.78■■■□□ 2.2
NUCB1-212ENST00000492367 MYO5CQ9NQX4 1742 aa28.77■■■□□ 2.2
NUCB1-212ENST00000492367 TTC37Q6PGP7 1564 aa28.76■■■□□ 2.2
NUCB1-212ENST00000492367 CFDP1Q9UEE9 299 aaPredicted RBP28.74■■■□□ 2.19
NUCB1-212ENST00000492367 MAPKBP1O60336 1514 aa28.74■■■□□ 2.19
NUCB1-212ENST00000492367 KCNH8Q96L42 1107 aa28.74■■■□□ 2.19
NUCB1-212ENST00000492367 ABCA9Q8IUA7 1624 aa28.7■■■□□ 2.18
NUCB1-212ENST00000492367 CDC42BPBQ9Y5S2 1711 aa28.69■■■□□ 2.18
NUCB1-212ENST00000492367 CAMSAP2Q08AD1 1489 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms