RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 ZNF326Q5BKZ1 582 aaKnown RBP21.49■■□□□ 1.03
TNFRSF1B-203ENST00000492361 FHOD3Q2V2M9 1422 aa21.48■■□□□ 1.03
TNFRSF1B-203ENST00000492361 PRXQ9BXM0 1461 aa21.47■■□□□ 1.03
TNFRSF1B-203ENST00000492361 ARHGAP35Q9NRY4 1499 aa21.45■■□□□ 1.02
TNFRSF1B-203ENST00000492361 MTUS2Q5JR59 1369 aa21.45■■□□□ 1.02
TNFRSF1B-203ENST00000492361 TONSLQ96HA7 1378 aa21.45■■□□□ 1.02
TNFRSF1B-203ENST00000492361 FOXD1Q16676 465 aa21.44■■□□□ 1.02
TNFRSF1B-203ENST00000492361 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
TNFRSF1B-203ENST00000492361 PHLDB1Q86UU1 1377 aa21.43■■□□□ 1.02
TNFRSF1B-203ENST00000492361 FBLN2P98095 1184 aa21.43■■□□□ 1.02
TNFRSF1B-203ENST00000492361 TOP2BQ02880 1626 aa21.42■■□□□ 1.02
TNFRSF1B-203ENST00000492361 CLSPNQ9HAW4 1339 aa21.41■■□□□ 1.02
TNFRSF1B-203ENST00000492361 DNAJC5BQ9UF47 199 aa21.4■■□□□ 1.02
TNFRSF1B-203ENST00000492361 SETD5Q9C0A6 1442 aa21.39■■□□□ 1.01
TNFRSF1B-203ENST00000492361 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
TNFRSF1B-203ENST00000492361 HNRNPUQ00839 825 aaKnown RBP eCLIP21.38■■□□□ 1.01
TNFRSF1B-203ENST00000492361 CADPSQ9ULU8 1353 aa21.37■■□□□ 1.01
TNFRSF1B-203ENST00000492361 ZNF777Q9ULD5 760 aaPredicted RBP21.36■■□□□ 1.01
TNFRSF1B-203ENST00000492361 NCAPD3P42695 1498 aa21.33■■□□□ 1
TNFRSF1B-203ENST00000492361 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1
TNFRSF1B-203ENST00000492361 PEG3Q9GZU2 1588 aa21.32■■□□□ 1
TNFRSF1B-203ENST00000492361 FAM9BQ8IZU0 186 aa21.32■■□□□ 1
TNFRSF1B-203ENST00000492361 CFTRP13569 1480 aa21.27■■□□□ 1
TNFRSF1B-203ENST00000492361 PPP1R15AO75807 674 aaPredicted RBP21.27■■□□□ 1
TNFRSF1B-203ENST00000492361 RRBP1Q9P2E9 1410 aaKnown RBP21.26■□□□□ 0.99
TNFRSF1B-203ENST00000492361 NESP48681 1621 aa21.25■□□□□ 0.99
TNFRSF1B-203ENST00000492361 TSHZ2Q9NRE2 1034 aa21.24■□□□□ 0.99
TNFRSF1B-203ENST00000492361 ERICH3Q5RHP9 1530 aa21.21■□□□□ 0.99
TNFRSF1B-203ENST00000492361 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
TNFRSF1B-203ENST00000492361 FANCD2Q9BXW9 1451 aa21.19■□□□□ 0.98
TNFRSF1B-203ENST00000492361 LRRC9Q6ZRR7 1453 aa21.17■□□□□ 0.98
TNFRSF1B-203ENST00000492361 WDR97A6NE52 1622 aa21.13■□□□□ 0.97
TNFRSF1B-203ENST00000492361 ERICH6Q7L0X2 663 aa21.12■□□□□ 0.97
TNFRSF1B-203ENST00000492361 SALL2Q9Y467 1007 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF1B-203ENST00000492361 HSPA5P11021 654 aaKnown RBP21.11■□□□□ 0.97
TNFRSF1B-203ENST00000492361 SLC4A1APQ9BWU0 796 aaKnown RBP21.08■□□□□ 0.97
TNFRSF1B-203ENST00000492361 MRS2Q9HD23 443 aa21.08■□□□□ 0.96
TNFRSF1B-203ENST00000492361 KDM2AQ9Y2K7 1162 aa21.08■□□□□ 0.96
TNFRSF1B-203ENST00000492361 BIVM-ERCC5R4GMW8 1640 aa21.06■□□□□ 0.96
TNFRSF1B-203ENST00000492361 EIF4G2P78344 907 aaKnown RBP eCLIP21.05■□□□□ 0.96
TNFRSF1B-203ENST00000492361 MYT1Q01538 1121 aa21.04■□□□□ 0.96
TNFRSF1B-203ENST00000492361 L3MBTL2Q969R5 705 aa21.02■□□□□ 0.96
TNFRSF1B-203ENST00000492361 ZNF644Q9H582 1327 aaPredicted RBP21.02■□□□□ 0.96
TNFRSF1B-203ENST00000492361 TIAM1Q13009 1591 aa21.02■□□□□ 0.96
TNFRSF1B-203ENST00000492361 HMGXB3Q12766 1538 aa21.02■□□□□ 0.95
TNFRSF1B-203ENST00000492361 CCDC184Q52MB2 194 aa20.99■□□□□ 0.95
TNFRSF1B-203ENST00000492361 MAPKBP1O60336 1514 aa20.99■□□□□ 0.95
TNFRSF1B-203ENST00000492361 MPHOSPH9Q99550 1183 aa20.98■□□□□ 0.95
TNFRSF1B-203ENST00000492361 FGD6Q6ZV73 1430 aa20.96■□□□□ 0.95
TNFRSF1B-203ENST00000492361 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
TNFRSF1B-203ENST00000492361 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
TNFRSF1B-203ENST00000492361 CCDC18Q5T9S5 1454 aa20.95■□□□□ 0.94
TNFRSF1B-203ENST00000492361 RBM19Q9Y4C8 960 aaKnown RBP20.95■□□□□ 0.94
TNFRSF1B-203ENST00000492361 PCF11O94913 1555 aaKnown RBP20.94■□□□□ 0.94
TNFRSF1B-203ENST00000492361 B4GALNT3Q6L9W6 998 aa20.94■□□□□ 0.94
TNFRSF1B-203ENST00000492361 FMN1Q68DA7 1419 aa20.93■□□□□ 0.94
TNFRSF1B-203ENST00000492361 CC2D2AQ9P2K1 1620 aa20.91■□□□□ 0.94
TNFRSF1B-203ENST00000492361 PTPRKQ15262 1439 aa20.9■□□□□ 0.94
TNFRSF1B-203ENST00000492361 CHMP7Q8WUX9 453 aaPredicted RBP20.9■□□□□ 0.94
TNFRSF1B-203ENST00000492361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.89■□□□□ 0.94
TNFRSF1B-203ENST00000492361 CCER2I3L3R5 266 aa20.89■□□□□ 0.93
TNFRSF1B-203ENST00000492361 CFDP1Q9UEE9 299 aaPredicted RBP20.89■□□□□ 0.93
TNFRSF1B-203ENST00000492361 TIMELESSQ9UNS1 1208 aa20.88■□□□□ 0.93
TNFRSF1B-203ENST00000492361 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.932e-7■■■■■ 45
TNFRSF1B-203ENST00000492361 WASHC2AQ641Q2 1341 aa20.88■□□□□ 0.93
TNFRSF1B-203ENST00000492361 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
TNFRSF1B-203ENST00000492361 RGL3Q3MIN7 710 aa20.87■□□□□ 0.93
TNFRSF1B-203ENST00000492361 C11orf95C9JLR9 678 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF1B-203ENST00000492361 ANP32EQ9BTT0 268 aa20.85■□□□□ 0.93
TNFRSF1B-203ENST00000492361 CASKIN1Q8WXD9 1431 aa20.84■□□□□ 0.93
TNFRSF1B-203ENST00000492361 PDS5BQ9NTI5 1447 aa20.84■□□□□ 0.93
TNFRSF1B-203ENST00000492361 NCOA2Q15596 1464 aa20.83■□□□□ 0.93
TNFRSF1B-203ENST00000492361 GAPVD1Q14C86 1478 aa20.83■□□□□ 0.92
TNFRSF1B-203ENST00000492361 MYT1LQ9UL68 1186 aa20.82■□□□□ 0.92
TNFRSF1B-203ENST00000492361 NBPF8Q3BBV2 869 aa20.79■□□□□ 0.92
TNFRSF1B-203ENST00000492361 PKD2Q13563 968 aa20.77■□□□□ 0.92
TNFRSF1B-203ENST00000492361 MYOM3Q5VTT5 1437 aa20.77■□□□□ 0.92
TNFRSF1B-203ENST00000492361 TMC1Q8TDI8 760 aa20.76■□□□□ 0.91
TNFRSF1B-203ENST00000492361 UACAQ9BZF9 1416 aa20.75■□□□□ 0.91
TNFRSF1B-203ENST00000492361 NAIPQ13075 1403 aa20.75■□□□□ 0.91
TNFRSF1B-203ENST00000492361 FYCO1Q9BQS8 1478 aa20.74■□□□□ 0.91
TNFRSF1B-203ENST00000492361 NPM2Q86SE8 214 aaKnown RBP20.71■□□□□ 0.91
TNFRSF1B-203ENST00000492361 PRKRIP1Q9H875 184 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF1B-203ENST00000492361 CARD11Q9BXL7 1154 aa20.7■□□□□ 0.9
TNFRSF1B-203ENST00000492361 NBR1Q14596 966 aa20.69■□□□□ 0.9
TNFRSF1B-203ENST00000492361 DCAF11Q8TEB1 546 aa20.69■□□□□ 0.9
TNFRSF1B-203ENST00000492361 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
TNFRSF1B-203ENST00000492361 CDK13Q14004 1512 aaKnown RBP20.68■□□□□ 0.9
TNFRSF1B-203ENST00000492361 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
TNFRSF1B-203ENST00000492361 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
TNFRSF1B-203ENST00000492361 HFM1A2PYH4 1435 aa20.67■□□□□ 0.9
TNFRSF1B-203ENST00000492361 TSPY4P0CV99 314 aa20.67■□□□□ 0.9
TNFRSF1B-203ENST00000492361 TSPY10P0CW01 314 aa20.67■□□□□ 0.9
TNFRSF1B-203ENST00000492361 CCDC136Q96JN2 1154 aa20.66■□□□□ 0.9
TNFRSF1B-203ENST00000492361 HNRNPMP52272 730 aaKnown RBP eCLIP20.65■□□□□ 0.9
TNFRSF1B-203ENST00000492361 PLEKHD1A6NEE1 506 aa20.65■□□□□ 0.9
TNFRSF1B-203ENST00000492361 DNMBPQ6XZF7 1577 aa20.64■□□□□ 0.89
TNFRSF1B-203ENST00000492361 KIF7Q2M1P5 1343 aa20.63■□□□□ 0.89
TNFRSF1B-203ENST00000492361 PPP4R2Q9NY27 417 aa20.59■□□□□ 0.89
TNFRSF1B-203ENST00000492361 CC2D1BQ5T0F9 858 aaKnown RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms