RNA–Protein interactions for RNA: ENST00000491974.1

SNHG28-202, Transcript of small nucleolar RNA host gene 28, humanhuman

TSL 2

Gene SNHG28, Length 1,064 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-202ENST00000491974 CLASP1Q7Z460 1538 aa27.08■■□□□ 1.93
SNHG28-202ENST00000491974 GOLGA3Q08378 1498 aa27.05■■□□□ 1.92
SNHG28-202ENST00000491974 UBTFP17480 764 aaKnown RBP27.04■■□□□ 1.92
SNHG28-202ENST00000491974 JPH4Q96JJ6 628 aa27.04■■□□□ 1.92
SNHG28-202ENST00000491974 IQGAP2Q13576 1575 aa26.92■■□□□ 1.9
SNHG28-202ENST00000491974 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
SNHG28-202ENST00000491974 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.9
SNHG28-202ENST00000491974 SHROOM2Q13796 1616 aa26.87■■□□□ 1.89
SNHG28-202ENST00000491974 ARHGEF11O15085 1522 aa26.84■■□□□ 1.89
SNHG28-202ENST00000491974 TNIKQ9UKE5 1360 aa26.84■■□□□ 1.89
SNHG28-202ENST00000491974 CTTNBP2Q8WZ74 1663 aa26.83■■□□□ 1.89
SNHG28-202ENST00000491974 UGGT2Q9NYU1 1516 aa26.83■■□□□ 1.89
SNHG28-202ENST00000491974 RANGAP1P46060 587 aaPredicted RBP26.82■■□□□ 1.88
SNHG28-202ENST00000491974 CARMIL2Q6F5E8 1435 aa26.81■■□□□ 1.88
SNHG28-202ENST00000491974 ERCC6L2Q5T890 1561 aa26.75■■□□□ 1.87
SNHG28-202ENST00000491974 DISP1Q96F81 1524 aa26.75■■□□□ 1.87
SNHG28-202ENST00000491974 RIMBP3CA6NJZ7 1639 aa26.74■■□□□ 1.87
SNHG28-202ENST00000491974 RIMBP3BA6NNM3 1639 aa26.74■■□□□ 1.87
SNHG28-202ENST00000491974 RIMBP3Q9UFD9 1639 aa26.74■■□□□ 1.87
SNHG28-202ENST00000491974 P3H3Q8IVL6 736 aa26.71■■□□□ 1.87
SNHG28-202ENST00000491974 CYB5RLQ6IPT4 315 aa26.69■■□□□ 1.86
SNHG28-202ENST00000491974 ARAP1Q96P48 1450 aa26.67■■□□□ 1.86
SNHG28-202ENST00000491974 PTPRGP23470 1445 aa26.66■■□□□ 1.86
SNHG28-202ENST00000491974 TTBK1Q5TCY1 1321 aaPredicted RBP26.65■■□□□ 1.86
SNHG28-202ENST00000491974 KIAA0556O60303 1618 aa26.65■■□□□ 1.86
SNHG28-202ENST00000491974 EFCAB5A4FU69 1503 aa26.61■■□□□ 1.85
SNHG28-202ENST00000491974 CLIP1P30622 1438 aa26.61■■□□□ 1.85
SNHG28-202ENST00000491974 SAMD9Q5K651 1589 aa26.61■■□□□ 1.85
SNHG28-202ENST00000491974 ARHGAP35Q9NRY4 1499 aa26.58■■□□□ 1.85
SNHG28-202ENST00000491974 CEP162Q5TB80 1403 aa26.57■■□□□ 1.84
SNHG28-202ENST00000491974 FHOD3Q2V2M9 1422 aa26.56■■□□□ 1.84
SNHG28-202ENST00000491974 UACAQ9BZF9 1416 aa26.47■■□□□ 1.83
SNHG28-202ENST00000491974 FMN1Q68DA7 1419 aa26.43■■□□□ 1.82
SNHG28-202ENST00000491974 PLB1Q6P1J6 1458 aa26.42■■□□□ 1.82
SNHG28-202ENST00000491974 UHRF1BP1LA0JNW5 1464 aa26.39■■□□□ 1.82
SNHG28-202ENST00000491974 NPM1P06748 294 aaKnown RBP eCLIP26.38■■□□□ 1.81
SNHG28-202ENST00000491974 ABCA8O94911 1581 aa26.36■■□□□ 1.81
SNHG28-202ENST00000491974 ABCC2Q92887 1545 aa26.34■■□□□ 1.81
SNHG28-202ENST00000491974 ADCY10Q96PN6 1610 aa26.32■■□□□ 1.8
SNHG28-202ENST00000491974 ATP1B4Q9UN42 357 aaPredicted RBP26.31■■□□□ 1.8
SNHG28-202ENST00000491974 ARID3CA6NKF2 412 aa26.27■■□□□ 1.8
SNHG28-202ENST00000491974 RAPGEF6Q8TEU7 1601 aa26.27■■□□□ 1.8
SNHG28-202ENST00000491974 CASKIN1Q8WXD9 1431 aa26.26■■□□□ 1.79
SNHG28-202ENST00000491974 KDM5BQ9UGL1 1544 aa26.25■■□□□ 1.79
SNHG28-202ENST00000491974 NUP153P49790 1475 aaKnown RBP26.24■■□□□ 1.79
SNHG28-202ENST00000491974 AEBP2Q6ZN18 517 aaPredicted RBP26.24■■□□□ 1.79
SNHG28-202ENST00000491974 VPS8Q8N3P4 1428 aa26.22■■□□□ 1.79
SNHG28-202ENST00000491974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.21■■□□□ 1.79
SNHG28-202ENST00000491974 HNRNPUL2Q1KMD3 747 aaKnown RBP26.21■■□□□ 1.79
SNHG28-202ENST00000491974 ATP10BO94823 1461 aa26.21■■□□□ 1.79
SNHG28-202ENST00000491974 FYCO1Q9BQS8 1478 aa26.18■■□□□ 1.78
SNHG28-202ENST00000491974 PCF11O94913 1555 aaKnown RBP26.16■■□□□ 1.78
SNHG28-202ENST00000491974 HECW1Q76N89 1606 aa26.15■■□□□ 1.78
SNHG28-202ENST00000491974 EPRSP07814 1512 aaKnown RBP26.14■■□□□ 1.77
SNHG28-202ENST00000491974 ASXL2Q76L83 1435 aa26.12■■□□□ 1.77
SNHG28-202ENST00000491974 ZCCHC11Q5TAX3 1644 aaKnown RBP26.11■■□□□ 1.77
SNHG28-202ENST00000491974 PLEKHD1A6NEE1 506 aa26.11■■□□□ 1.77
SNHG28-202ENST00000491974 MAPKBP1O60336 1514 aa26.1■■□□□ 1.77
SNHG28-202ENST00000491974 CDK11AQ9UQ88 783 aaPredicted RBP26.1■■□□□ 1.77
SNHG28-202ENST00000491974 CDK13Q14004 1512 aaKnown RBP26.09■■□□□ 1.77
SNHG28-202ENST00000491974 CCDC18Q5T9S5 1454 aa26.08■■□□□ 1.77
SNHG28-202ENST00000491974 KCNH8Q96L42 1107 aa26.03■■□□□ 1.76
SNHG28-202ENST00000491974 WDR7Q9Y4E6 1490 aa26.03■■□□□ 1.76
SNHG28-202ENST00000491974 APLP2Q06481 763 aa26.02■■□□□ 1.76
SNHG28-202ENST00000491974 TRHP20396 242 aaPredicted RBP26.01■■□□□ 1.75
SNHG28-202ENST00000491974 FAM69CQ0P6D2 419 aa25.98■■□□□ 1.75
SNHG28-202ENST00000491974 ABCC10Q5T3U5 1492 aa25.98■■□□□ 1.75
SNHG28-202ENST00000491974 TROQ12816 1431 aaPredicted RBP25.94■■□□□ 1.74
SNHG28-202ENST00000491974 LRRIQ1Q96JM4 1722 aa25.92■■□□□ 1.74
SNHG28-202ENST00000491974 MAP3K1Q13233 1512 aa25.92■■□□□ 1.74
SNHG28-202ENST00000491974 MTUS2Q5JR59 1369 aa25.92■■□□□ 1.74
SNHG28-202ENST00000491974 TIAM1Q13009 1591 aa25.88■■□□□ 1.73
SNHG28-202ENST00000491974 KANK4Q5T7N3 995 aaPredicted RBP25.87■■□□□ 1.73
SNHG28-202ENST00000491974 DIP2BQ9P265 1576 aa25.86■■□□□ 1.73
SNHG28-202ENST00000491974 MAGI3Q5TCQ9 1506 aa25.86■■□□□ 1.73
SNHG28-202ENST00000491974 GLI2P10070 1586 aa25.85■■□□□ 1.73
SNHG28-202ENST00000491974 LRRC9Q6ZRR7 1453 aa25.83■■□□□ 1.73
SNHG28-202ENST00000491974 CFAP43Q8NDM7 1665 aa25.81■■□□□ 1.72
SNHG28-202ENST00000491974 CD109Q6YHK3 1445 aa25.8■■□□□ 1.72
SNHG28-202ENST00000491974 EHBP1L1Q8N3D4 1523 aa25.78■■□□□ 1.72
SNHG28-202ENST00000491974 KIF14Q15058 1648 aa25.76■■□□□ 1.71
SNHG28-202ENST00000491974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.75■■□□□ 1.71
SNHG28-202ENST00000491974 ABCA9Q8IUA7 1624 aa25.73■■□□□ 1.71
SNHG28-202ENST00000491974 KIF13AQ9H1H9 1805 aa25.72■■□□□ 1.71
SNHG28-202ENST00000491974 CCNB3Q8WWL7 1395 aa25.69■■□□□ 1.7
SNHG28-202ENST00000491974 NCOA2Q15596 1464 aa25.69■■□□□ 1.7
SNHG28-202ENST00000491974 MAP3K4Q9Y6R4 1608 aa25.69■■□□□ 1.7
SNHG28-202ENST00000491974 PPARGC1BQ86YN6 1023 aaKnown RBP25.68■■□□□ 1.7
SNHG28-202ENST00000491974 PLCH2O75038 1416 aa25.68■■□□□ 1.7
SNHG28-202ENST00000491974 TTC37Q6PGP7 1564 aa25.68■■□□□ 1.7
SNHG28-202ENST00000491974 EFCAB2Q5VUJ9 269 aa25.65■■□□□ 1.7
SNHG28-202ENST00000491974 GPATCH8Q9UKJ3 1502 aaKnown RBP25.63■■□□□ 1.69
SNHG28-202ENST00000491974 TEX14Q8IWB6 1497 aa25.63■■□□□ 1.69
SNHG28-202ENST00000491974 SUPT6HQ7KZ85 1726 aaKnown RBP25.63■■□□□ 1.69
SNHG28-202ENST00000491974 CFDP1Q9UEE9 299 aaPredicted RBP25.62■■□□□ 1.69
SNHG28-202ENST00000491974 PHLDB1Q86UU1 1377 aa25.58■■□□□ 1.69
SNHG28-202ENST00000491974 ARAP3Q8WWN8 1544 aa25.58■■□□□ 1.68
SNHG28-202ENST00000491974 FANCAO15360 1455 aa25.57■■□□□ 1.68
SNHG28-202ENST00000491974 NEO1Q92859 1461 aa25.56■■□□□ 1.68
SNHG28-202ENST00000491974 ARHGAP5Q13017 1502 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms