RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-210ENST00000491729 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
LSS-210ENST00000491729 SYNJ2O15056 1496 aa20.53■□□□□ 0.88
LSS-210ENST00000491729 GRIN2AQ12879 1464 aa20.52■□□□□ 0.88
LSS-210ENST00000491729 CLIP1P30622 1438 aa20.51■□□□□ 0.87
LSS-210ENST00000491729 ZEB1P37275 1124 aaPredicted RBP20.48■□□□□ 0.87
LSS-210ENST00000491729 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
LSS-210ENST00000491729 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
LSS-210ENST00000491729 ARHGAP35Q9NRY4 1499 aa20.45■□□□□ 0.86
LSS-210ENST00000491729 CTTNBP2Q8WZ74 1663 aa20.43■□□□□ 0.86
LSS-210ENST00000491729 ARAP1Q96P48 1450 aa20.42■□□□□ 0.86
LSS-210ENST00000491729 CHD1O14646 1710 aa20.42■□□□□ 0.86
LSS-210ENST00000491729 NUP160Q12769 1436 aa20.4■□□□□ 0.86
LSS-210ENST00000491729 PPARGC1BQ86YN6 1023 aaKnown RBP20.39■□□□□ 0.86
LSS-210ENST00000491729 KIAA0586Q9BVV6 1533 aa20.37■□□□□ 0.85
LSS-210ENST00000491729 IQGAP2Q13576 1575 aa20.34■□□□□ 0.85
LSS-210ENST00000491729 FHOD3Q2V2M9 1422 aa20.32■□□□□ 0.84
LSS-210ENST00000491729 JPH4Q96JJ6 628 aa20.3■□□□□ 0.84
LSS-210ENST00000491729 SAMD9Q5K651 1589 aa20.27■□□□□ 0.84
LSS-210ENST00000491729 VPS8Q8N3P4 1428 aa20.27■□□□□ 0.83
LSS-210ENST00000491729 DISP1Q96F81 1524 aa20.26■□□□□ 0.83
LSS-210ENST00000491729 UGGT2Q9NYU1 1516 aa20.26■□□□□ 0.83
LSS-210ENST00000491729 TTBK1Q5TCY1 1321 aaPredicted RBP20.21■□□□□ 0.83
LSS-210ENST00000491729 EFCAB5A4FU69 1503 aa20.21■□□□□ 0.83
LSS-210ENST00000491729 CLASP1Q7Z460 1538 aa20.18■□□□□ 0.82
LSS-210ENST00000491729 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
LSS-210ENST00000491729 KIAA0556O60303 1618 aa20.16■□□□□ 0.82
LSS-210ENST00000491729 PRG4Q92954 1404 aaPredicted RBP20.15■□□□□ 0.82
LSS-210ENST00000491729 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
LSS-210ENST00000491729 SHROOM2Q13796 1616 aa20.12■□□□□ 0.81
LSS-210ENST00000491729 KANK4Q5T7N3 995 aaPredicted RBP20.11■□□□□ 0.81
LSS-210ENST00000491729 PCF11O94913 1555 aaKnown RBP20.1■□□□□ 0.81
LSS-210ENST00000491729 ATP1B4Q9UN42 357 aaPredicted RBP20.1■□□□□ 0.81
LSS-210ENST00000491729 FMN1Q68DA7 1419 aa20.06■□□□□ 0.8
LSS-210ENST00000491729 ARID3CA6NKF2 412 aa20.06■□□□□ 0.8
LSS-210ENST00000491729 CASKIN1Q8WXD9 1431 aa20.05■□□□□ 0.8
LSS-210ENST00000491729 CARMIL2Q6F5E8 1435 aa20.05■□□□□ 0.8
LSS-210ENST00000491729 PLB1Q6P1J6 1458 aa20.04■□□□□ 0.8
LSS-210ENST00000491729 LRRIQ1Q96JM4 1722 aa20.03■□□□□ 0.8
LSS-210ENST00000491729 FYCO1Q9BQS8 1478 aa19.99■□□□□ 0.79
LSS-210ENST00000491729 PTPRGP23470 1445 aa19.98■□□□□ 0.79
LSS-210ENST00000491729 APLP2Q06481 763 aa19.97■□□□□ 0.79
LSS-210ENST00000491729 NUP153P49790 1475 aaKnown RBP19.95■□□□□ 0.78
LSS-210ENST00000491729 TIAM1Q13009 1591 aa19.95■□□□□ 0.78
LSS-210ENST00000491729 CDK13Q14004 1512 aaKnown RBP19.94■□□□□ 0.78
LSS-210ENST00000491729 RAPGEF6Q8TEU7 1601 aa19.91■□□□□ 0.78
LSS-210ENST00000491729 EPRSP07814 1512 aaKnown RBP19.91■□□□□ 0.78
LSS-210ENST00000491729 ABCA8O94911 1581 aa19.91■□□□□ 0.78
LSS-210ENST00000491729 MAGI3Q5TCQ9 1506 aa19.9■□□□□ 0.78
LSS-210ENST00000491729 CCER1Q8TC90 406 aaPredicted RBP19.9■□□□□ 0.78
LSS-210ENST00000491729 MAP3K1Q13233 1512 aa19.89■□□□□ 0.77
LSS-210ENST00000491729 LRRC9Q6ZRR7 1453 aa19.88■□□□□ 0.77
LSS-210ENST00000491729 CFAP43Q8NDM7 1665 aa19.87■□□□□ 0.77
LSS-210ENST00000491729 HECW1Q76N89 1606 aa19.86■□□□□ 0.77
LSS-210ENST00000491729 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
LSS-210ENST00000491729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
LSS-210ENST00000491729 ATP10BO94823 1461 aa19.84■□□□□ 0.77
LSS-210ENST00000491729 HNRNPUL2Q1KMD3 747 aaKnown RBP19.81■□□□□ 0.76
LSS-210ENST00000491729 ARHGEF11O15085 1522 aa19.8■□□□□ 0.76
LSS-210ENST00000491729 PHLDB1Q86UU1 1377 aa19.78■□□□□ 0.76
LSS-210ENST00000491729 CCDC18Q5T9S5 1454 aa19.78■□□□□ 0.76
LSS-210ENST00000491729 MTUS2Q5JR59 1369 aa19.77■□□□□ 0.76
LSS-210ENST00000491729 ABCC2Q92887 1545 aa19.76■□□□□ 0.75
LSS-210ENST00000491729 ADCY10Q96PN6 1610 aa19.74■□□□□ 0.75
LSS-210ENST00000491729 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
LSS-210ENST00000491729 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
LSS-210ENST00000491729 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
LSS-210ENST00000491729 CYB5RLQ6IPT4 315 aa19.72■□□□□ 0.75
LSS-210ENST00000491729 UHRF1BP1LA0JNW5 1464 aa19.71■□□□□ 0.75
LSS-210ENST00000491729 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
LSS-210ENST00000491729 KDM5BQ9UGL1 1544 aa19.68■□□□□ 0.74
LSS-210ENST00000491729 EHBP1L1Q8N3D4 1523 aa19.67■□□□□ 0.74
LSS-210ENST00000491729 TROQ12816 1431 aaPredicted RBP19.66■□□□□ 0.74
LSS-210ENST00000491729 PLEKHD1A6NEE1 506 aa19.66■□□□□ 0.74
LSS-210ENST00000491729 KIF14Q15058 1648 aa19.65■□□□□ 0.74
LSS-210ENST00000491729 ZCCHC11Q5TAX3 1644 aaKnown RBP19.65■□□□□ 0.74
LSS-210ENST00000491729 CDK11AQ9UQ88 783 aaPredicted RBP19.64■□□□□ 0.74
LSS-210ENST00000491729 RRBP1Q9P2E9 1410 aaKnown RBP19.63■□□□□ 0.73
LSS-210ENST00000491729 SUPT6HQ7KZ85 1726 aaKnown RBP19.62■□□□□ 0.73
LSS-210ENST00000491729 KCNH8Q96L42 1107 aa19.61■□□□□ 0.73
LSS-210ENST00000491729 CCNB3Q8WWL7 1395 aa19.6■□□□□ 0.73
LSS-210ENST00000491729 MYOM3Q5VTT5 1437 aa19.57■□□□□ 0.72
LSS-210ENST00000491729 ZNF644Q9H582 1327 aaPredicted RBP19.57■□□□□ 0.72
LSS-210ENST00000491729 ABCC10Q5T3U5 1492 aa19.56■□□□□ 0.72
LSS-210ENST00000491729 FGD6Q6ZV73 1430 aa19.56■□□□□ 0.72
LSS-210ENST00000491729 ITGAEP38570 1179 aa19.55■□□□□ 0.72
LSS-210ENST00000491729 FAM50AQ14320 339 aaKnown RBP19.55■□□□□ 0.72
LSS-210ENST00000491729 GPATCH8Q9UKJ3 1502 aaKnown RBP19.54■□□□□ 0.72
LSS-210ENST00000491729 ASXL2Q76L83 1435 aa19.53■□□□□ 0.72
LSS-210ENST00000491729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.5■□□□□ 0.717e-7■■□□□ 14.3
LSS-210ENST00000491729 TTC37Q6PGP7 1564 aa19.49■□□□□ 0.71
LSS-210ENST00000491729 WDR7Q9Y4E6 1490 aa19.48■□□□□ 0.71
LSS-210ENST00000491729 PTPRKQ15262 1439 aa19.48■□□□□ 0.71
LSS-210ENST00000491729 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
LSS-210ENST00000491729 CDC42BPAQ5VT25 1732 aa19.46■□□□□ 0.71
LSS-210ENST00000491729 PTPN23Q9H3S7 1636 aa19.46■□□□□ 0.71
LSS-210ENST00000491729 CFDP1Q9UEE9 299 aaPredicted RBP19.46■□□□□ 0.71
LSS-210ENST00000491729 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
LSS-210ENST00000491729 DIEXFQ68CQ4 756 aaKnown RBP19.45■□□□□ 0.7
LSS-210ENST00000491729 CLSPNQ9HAW4 1339 aa19.43■□□□□ 0.7
LSS-210ENST00000491729 MIA2Q96PC5 1412 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms