RNA–Protein interactions for RNA: ENST00000491680.6

LCLAT1-211, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-211ENST00000491680 ARAP1Q96P48 1450 aa18.52■□□□□ 0.55
LCLAT1-211ENST00000491680 CARMIL1Q5VZK9 1371 aa18.49■□□□□ 0.55
LCLAT1-211ENST00000491680 RUSC2Q8N2Y8 1516 aa18.49■□□□□ 0.55
LCLAT1-211ENST00000491680 EEA1Q15075 1411 aa18.47■□□□□ 0.55
LCLAT1-211ENST00000491680 TRHP20396 242 aaPredicted RBP18.47■□□□□ 0.55
LCLAT1-211ENST00000491680 SHROOM2Q13796 1616 aa18.47■□□□□ 0.55
LCLAT1-211ENST00000491680 LOC105371045A0A1W2PR82 267 aa18.45■□□□□ 0.54
LCLAT1-211ENST00000491680 ERCC6L2Q5T890 1561 aa18.42■□□□□ 0.54
LCLAT1-211ENST00000491680 KIAA0586Q9BVV6 1533 aa18.4■□□□□ 0.54
LCLAT1-211ENST00000491680 HRCP23327 699 aa18.4■□□□□ 0.54
LCLAT1-211ENST00000491680 JPH4Q96JJ6 628 aa18.4■□□□□ 0.54
LCLAT1-211ENST00000491680 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.54
LCLAT1-211ENST00000491680 PRG4Q92954 1404 aaPredicted RBP18.39■□□□□ 0.53
LCLAT1-211ENST00000491680 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
LCLAT1-211ENST00000491680 IQGAP2Q13576 1575 aa18.32■□□□□ 0.52
LCLAT1-211ENST00000491680 CTTNBP2Q8WZ74 1663 aa18.29■□□□□ 0.52
LCLAT1-211ENST00000491680 PRXQ9BXM0 1461 aa18.27■□□□□ 0.52
LCLAT1-211ENST00000491680 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
LCLAT1-211ENST00000491680 EHMT2Q96KQ7 1210 aa18.24■□□□□ 0.51
LCLAT1-211ENST00000491680 CARMIL2Q6F5E8 1435 aa18.24■□□□□ 0.51
LCLAT1-211ENST00000491680 KIF21BO75037 1637 aa18.23■□□□□ 0.51
LCLAT1-211ENST00000491680 GOLGA3Q08378 1498 aa18.2■□□□□ 0.5
LCLAT1-211ENST00000491680 UGGT2Q9NYU1 1516 aa18.18■□□□□ 0.5
LCLAT1-211ENST00000491680 TTBK1Q5TCY1 1321 aaPredicted RBP18.18■□□□□ 0.5
LCLAT1-211ENST00000491680 PCGF6Q9BYE7 350 aa18.16■□□□□ 0.5
LCLAT1-211ENST00000491680 TNIKQ9UKE5 1360 aa18.16■□□□□ 0.5
LCLAT1-211ENST00000491680 ILDR1Q86SU0 546 aaPredicted RBP18.16■□□□□ 0.5
LCLAT1-211ENST00000491680 PTPRGP23470 1445 aa18.15■□□□□ 0.5
LCLAT1-211ENST00000491680 DISP1Q96F81 1524 aa18.15■□□□□ 0.5
LCLAT1-211ENST00000491680 KIAA0556O60303 1618 aa18.15■□□□□ 0.5
LCLAT1-211ENST00000491680 ADCY10Q96PN6 1610 aa18.12■□□□□ 0.49
LCLAT1-211ENST00000491680 NPM1P06748 294 aaKnown RBP eCLIP18.12■□□□□ 0.49
LCLAT1-211ENST00000491680 UBTFP17480 764 aaKnown RBP18.08■□□□□ 0.48
LCLAT1-211ENST00000491680 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.48
LCLAT1-211ENST00000491680 CEP162Q5TB80 1403 aa18.03■□□□□ 0.48
LCLAT1-211ENST00000491680 UACAQ9BZF9 1416 aa18.03■□□□□ 0.48
LCLAT1-211ENST00000491680 MAPKBP1O60336 1514 aa18.01■□□□□ 0.47
LCLAT1-211ENST00000491680 RANGAP1P46060 587 aaPredicted RBP18.01■□□□□ 0.47
LCLAT1-211ENST00000491680 ABCC2Q92887 1545 aa18.01■□□□□ 0.47
LCLAT1-211ENST00000491680 UHRF1BP1LA0JNW5 1464 aa18■□□□□ 0.47
LCLAT1-211ENST00000491680 SAMD9Q5K651 1589 aa17.99■□□□□ 0.47
LCLAT1-211ENST00000491680 KIF13AQ9H1H9 1805 aa17.99■□□□□ 0.47
LCLAT1-211ENST00000491680 P3H3Q8IVL6 736 aa17.98■□□□□ 0.47
LCLAT1-211ENST00000491680 PLB1Q6P1J6 1458 aa17.95■□□□□ 0.46
LCLAT1-211ENST00000491680 ZCCHC11Q5TAX3 1644 aaKnown RBP17.94■□□□□ 0.46
LCLAT1-211ENST00000491680 ABCC10Q5T3U5 1492 aa17.93■□□□□ 0.46
LCLAT1-211ENST00000491680 ABCA8O94911 1581 aa17.93■□□□□ 0.46
LCLAT1-211ENST00000491680 DIP2BQ9P265 1576 aa17.92■□□□□ 0.46
LCLAT1-211ENST00000491680 KDM5BQ9UGL1 1544 aa17.92■□□□□ 0.46
LCLAT1-211ENST00000491680 FAM69CQ0P6D2 419 aa17.91■□□□□ 0.46
LCLAT1-211ENST00000491680 CLIP1P30622 1438 aa17.91■□□□□ 0.46
LCLAT1-211ENST00000491680 EFCAB5A4FU69 1503 aa17.91■□□□□ 0.46
LCLAT1-211ENST00000491680 ASXL2Q76L83 1435 aa17.89■□□□□ 0.46
LCLAT1-211ENST00000491680 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.45
LCLAT1-211ENST00000491680 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
LCLAT1-211ENST00000491680 RAPGEF6Q8TEU7 1601 aa17.87■□□□□ 0.45
LCLAT1-211ENST00000491680 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
LCLAT1-211ENST00000491680 ARID3CA6NKF2 412 aa17.81■□□□□ 0.44
LCLAT1-211ENST00000491680 WDR7Q9Y4E6 1490 aa17.8■□□□□ 0.44
LCLAT1-211ENST00000491680 GLI2P10070 1586 aa17.8■□□□□ 0.44
LCLAT1-211ENST00000491680 ARHGAP35Q9NRY4 1499 aa17.8■□□□□ 0.44
LCLAT1-211ENST00000491680 EPRSP07814 1512 aaKnown RBP17.78■□□□□ 0.44
LCLAT1-211ENST00000491680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
LCLAT1-211ENST00000491680 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
LCLAT1-211ENST00000491680 ATP10BO94823 1461 aa17.76■□□□□ 0.43
LCLAT1-211ENST00000491680 NUP153P49790 1475 aaKnown RBP17.75■□□□□ 0.43
LCLAT1-211ENST00000491680 VPS8Q8N3P4 1428 aa17.75■□□□□ 0.43
LCLAT1-211ENST00000491680 FMN1Q68DA7 1419 aa17.74■□□□□ 0.43
LCLAT1-211ENST00000491680 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
LCLAT1-211ENST00000491680 KCNH8Q96L42 1107 aa17.73■□□□□ 0.43
LCLAT1-211ENST00000491680 PPRC1Q5VV67 1664 aaKnown RBP17.71■□□□□ 0.43
LCLAT1-211ENST00000491680 CFAP43Q8NDM7 1665 aa17.7■□□□□ 0.42
LCLAT1-211ENST00000491680 ATP1B4Q9UN42 357 aaPredicted RBP17.7■□□□□ 0.42
LCLAT1-211ENST00000491680 HECW1Q76N89 1606 aa17.7■□□□□ 0.42
LCLAT1-211ENST00000491680 KDM6BO15054 1643 aa17.69■□□□□ 0.42
LCLAT1-211ENST00000491680 TEX14Q8IWB6 1497 aa17.67■□□□□ 0.42
LCLAT1-211ENST00000491680 CD109Q6YHK3 1445 aa17.65■□□□□ 0.42
LCLAT1-211ENST00000491680 CDK13Q14004 1512 aaKnown RBP17.65■□□□□ 0.42
LCLAT1-211ENST00000491680 PLEKHD1A6NEE1 506 aa17.65■□□□□ 0.42
LCLAT1-211ENST00000491680 PPARGC1BQ86YN6 1023 aaKnown RBP17.65■□□□□ 0.42
LCLAT1-211ENST00000491680 ABCA9Q8IUA7 1624 aa17.62■□□□□ 0.41
LCLAT1-211ENST00000491680 PCF11O94913 1555 aaKnown RBP17.61■□□□□ 0.41
LCLAT1-211ENST00000491680 MAGI3Q5TCQ9 1506 aa17.6■□□□□ 0.41
LCLAT1-211ENST00000491680 LRRIQ1Q96JM4 1722 aa17.6■□□□□ 0.41
LCLAT1-211ENST00000491680 CASKIN1Q8WXD9 1431 aa17.57■□□□□ 0.4
LCLAT1-211ENST00000491680 CDK11AQ9UQ88 783 aaPredicted RBP17.57■□□□□ 0.4
LCLAT1-211ENST00000491680 CCDC18Q5T9S5 1454 aa17.55■□□□□ 0.4
LCLAT1-211ENST00000491680 FYCO1Q9BQS8 1478 aa17.55■□□□□ 0.4
LCLAT1-211ENST00000491680 KDM4FA0A1W2PPD8 638 aa17.53■□□□□ 0.4
LCLAT1-211ENST00000491680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.52■□□□□ 0.4
LCLAT1-211ENST00000491680 TTC37Q6PGP7 1564 aa17.51■□□□□ 0.39
LCLAT1-211ENST00000491680 KIF14Q15058 1648 aa17.5■□□□□ 0.39
LCLAT1-211ENST00000491680 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
LCLAT1-211ENST00000491680 TROQ12816 1431 aaPredicted RBP17.49■□□□□ 0.39
LCLAT1-211ENST00000491680 CFAP74Q9C0B2 1584 aa17.47■□□□□ 0.39
LCLAT1-211ENST00000491680 NEO1Q92859 1461 aa17.47■□□□□ 0.39
LCLAT1-211ENST00000491680 APLP2Q06481 763 aa17.47■□□□□ 0.39
LCLAT1-211ENST00000491680 MAP3K1Q13233 1512 aa17.46■□□□□ 0.39
LCLAT1-211ENST00000491680 MYO5CQ9NQX4 1742 aa17.46■□□□□ 0.39
LCLAT1-211ENST00000491680 PHLDB1Q86UU1 1377 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms