RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 NUP160Q12769 1436 aa35.27■■■■□ 3.24
VCPKMT-204ENST00000491402 DNAJC5Q9H3Z4 198 aa35.23■■■■□ 3.23
VCPKMT-204ENST00000491402 TNIKQ9UKE5 1360 aa35.22■■■■□ 3.23
VCPKMT-204ENST00000491402 CTTNBP2Q8WZ74 1663 aa35.22■■■■□ 3.23
VCPKMT-204ENST00000491402 CLASP1Q7Z460 1538 aa35.19■■■■□ 3.22
VCPKMT-204ENST00000491402 KIAA0586Q9BVV6 1533 aa35.08■■■■□ 3.21
VCPKMT-204ENST00000491402 IQGAP2Q13576 1575 aa35.04■■■■□ 3.2
VCPKMT-204ENST00000491402 JPH4Q96JJ6 628 aa35.02■■■■□ 3.2
VCPKMT-204ENST00000491402 CEP162Q5TB80 1403 aa34.99■■■■□ 3.19
VCPKMT-204ENST00000491402 RANGAP1P46060 587 aaPredicted RBP34.92■■■■□ 3.18
VCPKMT-204ENST00000491402 SHROOM2Q13796 1616 aa34.92■■■■□ 3.18
VCPKMT-204ENST00000491402 ARHGEF11O15085 1522 aa34.89■■■■□ 3.18
VCPKMT-204ENST00000491402 CLIP1P30622 1438 aa34.89■■■■□ 3.18
VCPKMT-204ENST00000491402 PRG4Q92954 1404 aaPredicted RBP34.87■■■■□ 3.17
VCPKMT-204ENST00000491402 UGGT2Q9NYU1 1516 aa34.86■■■■□ 3.17
VCPKMT-204ENST00000491402 RIMBP3CA6NJZ7 1639 aa34.84■■■■□ 3.17
VCPKMT-204ENST00000491402 RIMBP3BA6NNM3 1639 aa34.84■■■■□ 3.17
VCPKMT-204ENST00000491402 RIMBP3Q9UFD9 1639 aa34.84■■■■□ 3.17
VCPKMT-204ENST00000491402 ERCC6L2Q5T890 1561 aa34.83■■■■□ 3.17
VCPKMT-204ENST00000491402 EFCAB5A4FU69 1503 aa34.8■■■■□ 3.16
VCPKMT-204ENST00000491402 ARHGAP35Q9NRY4 1499 aa34.8■■■■□ 3.16
VCPKMT-204ENST00000491402 SAMD9Q5K651 1589 aa34.79■■■■□ 3.16
VCPKMT-204ENST00000491402 DISP1Q96F81 1524 aa34.72■■■■□ 3.15
VCPKMT-204ENST00000491402 KIAA0556O60303 1618 aa34.7■■■■□ 3.15
VCPKMT-204ENST00000491402 CARMIL2Q6F5E8 1435 aa34.7■■■■□ 3.15
VCPKMT-204ENST00000491402 ARAP1Q96P48 1450 aa34.67■■■■□ 3.14
VCPKMT-204ENST00000491402 CYB5RLQ6IPT4 315 aa34.66■■■■□ 3.14
VCPKMT-204ENST00000491402 P3H3Q8IVL6 736 aa34.64■■■■□ 3.14
VCPKMT-204ENST00000491402 FHOD3Q2V2M9 1422 aa34.63■■■■□ 3.13
VCPKMT-204ENST00000491402 TTBK1Q5TCY1 1321 aaPredicted RBP34.62■■■■□ 3.13
VCPKMT-204ENST00000491402 PTPRGP23470 1445 aa34.53■■■■□ 3.12
VCPKMT-204ENST00000491402 VPS8Q8N3P4 1428 aa34.49■■■■□ 3.11
VCPKMT-204ENST00000491402 FMN1Q68DA7 1419 aa34.46■■■■□ 3.11
VCPKMT-204ENST00000491402 PCF11O94913 1555 aaKnown RBP34.35■■■■□ 3.09
VCPKMT-204ENST00000491402 CASKIN1Q8WXD9 1431 aa34.29■■■■□ 3.08
VCPKMT-204ENST00000491402 UACAQ9BZF9 1416 aa34.28■■■■□ 3.08
VCPKMT-204ENST00000491402 FYCO1Q9BQS8 1478 aa34.28■■■■□ 3.08
VCPKMT-204ENST00000491402 PLB1Q6P1J6 1458 aa34.27■■■■□ 3.08
VCPKMT-204ENST00000491402 RAPGEF6Q8TEU7 1601 aa34.26■■■■□ 3.08
VCPKMT-204ENST00000491402 ABCA8O94911 1581 aa34.24■■■■□ 3.07
VCPKMT-204ENST00000491402 ADCY10Q96PN6 1610 aa34.23■■■■□ 3.07
VCPKMT-204ENST00000491402 HECW1Q76N89 1606 aa34.21■■■■□ 3.07
VCPKMT-204ENST00000491402 ABCC2Q92887 1545 aa34.18■■■■□ 3.06
VCPKMT-204ENST00000491402 UHRF1BP1LA0JNW5 1464 aa34.18■■■■□ 3.06
VCPKMT-204ENST00000491402 ATP1B4Q9UN42 357 aaPredicted RBP34.16■■■■□ 3.06
VCPKMT-204ENST00000491402 LRRIQ1Q96JM4 1722 aa34.16■■■■□ 3.06
VCPKMT-204ENST00000491402 NPM1P06748 294 aaKnown RBP eCLIP34.15■■■■□ 3.06
VCPKMT-204ENST00000491402 NUP153P49790 1475 aaKnown RBP34.14■■■■□ 3.06
VCPKMT-204ENST00000491402 ARID3CA6NKF2 412 aa34.11■■■■□ 3.05
VCPKMT-204ENST00000491402 EPRSP07814 1512 aaKnown RBP34.08■■■■□ 3.05
VCPKMT-204ENST00000491402 CCDC18Q5T9S5 1454 aa34.06■■■■□ 3.04
VCPKMT-204ENST00000491402 APLP2Q06481 763 aa34.06■■■■□ 3.04
VCPKMT-204ENST00000491402 CFAP43Q8NDM7 1665 aa34.05■■■■□ 3.04
VCPKMT-204ENST00000491402 TIAM1Q13009 1591 aa34.05■■■■□ 3.04
VCPKMT-204ENST00000491402 MAP3K1Q13233 1512 aa34.04■■■■□ 3.04
VCPKMT-204ENST00000491402 KDM5BQ9UGL1 1544 aa34.03■■■■□ 3.04
VCPKMT-204ENST00000491402 CDK13Q14004 1512 aaKnown RBP34.02■■■■□ 3.04
VCPKMT-204ENST00000491402 ZCCHC11Q5TAX3 1644 aaKnown RBP33.97■■■■□ 3.03
VCPKMT-204ENST00000491402 ATP10BO94823 1461 aa33.97■■■■□ 3.03
VCPKMT-204ENST00000491402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.96■■■■□ 3.03
VCPKMT-204ENST00000491402 HNRNPUL2Q1KMD3 747 aaKnown RBP33.96■■■■□ 3.03
VCPKMT-204ENST00000491402 MAPKBP1O60336 1514 aa33.88■■■■□ 3.01
VCPKMT-204ENST00000491402 LRRC9Q6ZRR7 1453 aa33.87■■■■□ 3.01
VCPKMT-204ENST00000491402 ASXL2Q76L83 1435 aa33.87■■■■□ 3.01
VCPKMT-204ENST00000491402 KANK4Q5T7N3 995 aaPredicted RBP33.87■■■■□ 3.01
VCPKMT-204ENST00000491402 PPARGC1BQ86YN6 1023 aaKnown RBP33.85■■■■□ 3.01
VCPKMT-204ENST00000491402 MAGI3Q5TCQ9 1506 aa33.84■■■■□ 3.01
VCPKMT-204ENST00000491402 MTUS2Q5JR59 1369 aa33.8■■■■□ 3
VCPKMT-204ENST00000491402 TRHP20396 242 aaPredicted RBP33.8■■■■□ 3
VCPKMT-204ENST00000491402 CDK11AQ9UQ88 783 aaPredicted RBP33.8■■■■□ 3
VCPKMT-204ENST00000491402 EHBP1L1Q8N3D4 1523 aa33.79■■■■□ 3
VCPKMT-204ENST00000491402 PLEKHD1A6NEE1 506 aa33.76■■■■□ 3
VCPKMT-204ENST00000491402 KCNH8Q96L42 1107 aa33.75■■■□□ 2.99
VCPKMT-204ENST00000491402 WDR7Q9Y4E6 1490 aa33.75■■■□□ 2.99
VCPKMT-204ENST00000491402 TROQ12816 1431 aaPredicted RBP33.72■■■□□ 2.99
VCPKMT-204ENST00000491402 FAM69CQ0P6D2 419 aa33.7■■■□□ 2.99
VCPKMT-204ENST00000491402 ABCC10Q5T3U5 1492 aa33.7■■■□□ 2.98
VCPKMT-204ENST00000491402 SUPT6HQ7KZ85 1726 aaKnown RBP33.68■■■□□ 2.98
VCPKMT-204ENST00000491402 DIP2BQ9P265 1576 aa33.64■■■□□ 2.98
VCPKMT-204ENST00000491402 KIF14Q15058 1648 aa33.62■■■□□ 2.97
VCPKMT-204ENST00000491402 KIF13AQ9H1H9 1805 aa33.61■■■□□ 2.97
VCPKMT-204ENST00000491402 NCOA2Q15596 1464 aa33.6■■■□□ 2.97
VCPKMT-204ENST00000491402 GLI2P10070 1586 aa33.53■■■□□ 2.96
VCPKMT-204ENST00000491402 PHLDB1Q86UU1 1377 aa33.5■■■□□ 2.95
VCPKMT-204ENST00000491402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.47■■■□□ 2.95
VCPKMT-204ENST00000491402 TTC37Q6PGP7 1564 aa33.45■■■□□ 2.95
VCPKMT-204ENST00000491402 ABCA9Q8IUA7 1624 aa33.43■■■□□ 2.94
VCPKMT-204ENST00000491402 CD109Q6YHK3 1445 aa33.43■■■□□ 2.94
VCPKMT-204ENST00000491402 MYOM3Q5VTT5 1437 aa33.42■■■□□ 2.94
VCPKMT-204ENST00000491402 TSPOAP1O95153 1857 aa33.42■■■□□ 2.94
VCPKMT-204ENST00000491402 MAP3K4Q9Y6R4 1608 aa33.42■■■□□ 2.94
VCPKMT-204ENST00000491402 CCNB3Q8WWL7 1395 aa33.41■■■□□ 2.94
VCPKMT-204ENST00000491402 CDC42BPAQ5VT25 1732 aa33.4■■■□□ 2.94
VCPKMT-204ENST00000491402 ITSN2Q9NZM3 1697 aa33.39■■■□□ 2.94
VCPKMT-204ENST00000491402 GPATCH8Q9UKJ3 1502 aaKnown RBP33.37■■■□□ 2.93
VCPKMT-204ENST00000491402 MYO5CQ9NQX4 1742 aa33.35■■■□□ 2.93
VCPKMT-204ENST00000491402 PREX2Q70Z35 1606 aa33.33■■■□□ 2.93
VCPKMT-204ENST00000491402 FGD6Q6ZV73 1430 aa33.33■■■□□ 2.93
VCPKMT-204ENST00000491402 RRBP1Q9P2E9 1410 aaKnown RBP33.33■■■□□ 2.93
VCPKMT-204ENST00000491402 CDC42BPBQ9Y5S2 1711 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms