RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 DISP1Q96F81 1524 aa16.06■□□□□ 0.16
SUPT20H-220ENST00000490716 KIF21BO75037 1637 aa16.06■□□□□ 0.16
SUPT20H-220ENST00000490716 RAPGEF2Q9Y4G8 1499 aa16.06■□□□□ 0.16
SUPT20H-220ENST00000490716 CARMIL1Q5VZK9 1371 aa16.05■□□□□ 0.16
SUPT20H-220ENST00000490716 CHMP7Q8WUX9 453 aaPredicted RBP16.05■□□□□ 0.16
SUPT20H-220ENST00000490716 ADCY10Q96PN6 1610 aa16.05■□□□□ 0.16
SUPT20H-220ENST00000490716 SAMD9Q5K651 1589 aa16.03■□□□□ 0.16
SUPT20H-220ENST00000490716 KIF13AQ9H1H9 1805 aa16.01■□□□□ 0.15
SUPT20H-220ENST00000490716 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
SUPT20H-220ENST00000490716 EEA1Q15075 1411 aa15.99■□□□□ 0.15
SUPT20H-220ENST00000490716 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
SUPT20H-220ENST00000490716 MAPKBP1O60336 1514 aa15.94■□□□□ 0.14
SUPT20H-220ENST00000490716 UHRF1BP1LA0JNW5 1464 aa15.93■□□□□ 0.14
SUPT20H-220ENST00000490716 FBLN2P98095 1184 aa15.91■□□□□ 0.14
SUPT20H-220ENST00000490716 ABCA8O94911 1581 aa15.89■□□□□ 0.13
SUPT20H-220ENST00000490716 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
SUPT20H-220ENST00000490716 CHIC1Q5VXU3 224 aa15.88■□□□□ 0.13
SUPT20H-220ENST00000490716 PPRC1Q5VV67 1664 aaKnown RBP15.86■□□□□ 0.13
SUPT20H-220ENST00000490716 TRIM41Q8WV44 630 aa15.83■□□□□ 0.13
SUPT20H-220ENST00000490716 DIP2BQ9P265 1576 aa15.83■□□□□ 0.12
SUPT20H-220ENST00000490716 ABCC2Q92887 1545 aa15.83■□□□□ 0.12
SUPT20H-220ENST00000490716 KDM5BQ9UGL1 1544 aa15.82■□□□□ 0.12
SUPT20H-220ENST00000490716 ZCCHC11Q5TAX3 1644 aaKnown RBP15.82■□□□□ 0.12
SUPT20H-220ENST00000490716 LRRIQ1Q96JM4 1722 aa15.8■□□□□ 0.12
SUPT20H-220ENST00000490716 GLI2P10070 1586 aa15.8■□□□□ 0.12
SUPT20H-220ENST00000490716 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
SUPT20H-220ENST00000490716 MAP3K4Q9Y6R4 1608 aa15.77■□□□□ 0.12
SUPT20H-220ENST00000490716 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
SUPT20H-220ENST00000490716 EFCAB5A4FU69 1503 aa15.76■□□□□ 0.11
SUPT20H-220ENST00000490716 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
SUPT20H-220ENST00000490716 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
SUPT20H-220ENST00000490716 ABCC10Q5T3U5 1492 aa15.73■□□□□ 0.11
SUPT20H-220ENST00000490716 CARMIL2Q6F5E8 1435 aa15.71■□□□□ 0.11
SUPT20H-220ENST00000490716 RAPGEF6Q8TEU7 1601 aa15.71■□□□□ 0.1
SUPT20H-220ENST00000490716 UACAQ9BZF9 1416 aa15.7■□□□□ 0.1
SUPT20H-220ENST00000490716 PTPRGP23470 1445 aa15.67■□□□□ 0.1
SUPT20H-220ENST00000490716 PLB1Q6P1J6 1458 aa15.67■□□□□ 0.1
SUPT20H-220ENST00000490716 ARHGAP35Q9NRY4 1499 aa15.64■□□□□ 0.09
SUPT20H-220ENST00000490716 CFAP43Q8NDM7 1665 aa15.63■□□□□ 0.09
SUPT20H-220ENST00000490716 NUP153P49790 1475 aaKnown RBP15.62■□□□□ 0.09
SUPT20H-220ENST00000490716 EPRSP07814 1512 aaKnown RBP15.61■□□□□ 0.09
SUPT20H-220ENST00000490716 ABCA9Q8IUA7 1624 aa15.61■□□□□ 0.09
SUPT20H-220ENST00000490716 ATP10BO94823 1461 aa15.58■□□□□ 0.09
SUPT20H-220ENST00000490716 ASXL2Q76L83 1435 aa15.58■□□□□ 0.08
SUPT20H-220ENST00000490716 WDR7Q9Y4E6 1490 aa15.55■□□□□ 0.08
SUPT20H-220ENST00000490716 FHOD3Q2V2M9 1422 aa15.51■□□□□ 0.07
SUPT20H-220ENST00000490716 MAGI3Q5TCQ9 1506 aa15.5■□□□□ 0.07
SUPT20H-220ENST00000490716 TSPOAP1O95153 1857 aa15.49■□□□□ 0.07
SUPT20H-220ENST00000490716 HECW1Q76N89 1606 aa15.49■□□□□ 0.07
SUPT20H-220ENST00000490716 PCF11O94913 1555 aaKnown RBP15.49■□□□□ 0.07
SUPT20H-220ENST00000490716 FRMPD1Q5SYB0 1578 aa15.45■□□□□ 0.06
SUPT20H-220ENST00000490716 TTC37Q6PGP7 1564 aa15.44■□□□□ 0.06
SUPT20H-220ENST00000490716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.44■□□□□ 0.06
SUPT20H-220ENST00000490716 ARAP3Q8WWN8 1544 aa15.42■□□□□ 0.06
SUPT20H-220ENST00000490716 RICTORQ6R327 1708 aa15.42■□□□□ 0.06
SUPT20H-220ENST00000490716 COL17A1Q9UMD9 1497 aaPredicted RBP15.42■□□□□ 0.06
SUPT20H-220ENST00000490716 CASKIN1Q8WXD9 1431 aa15.41■□□□□ 0.06
SUPT20H-220ENST00000490716 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
SUPT20H-220ENST00000490716 CDK13Q14004 1512 aaKnown RBP15.4■□□□□ 0.06
SUPT20H-220ENST00000490716 CDC42BPBQ9Y5S2 1711 aa15.4■□□□□ 0.06
SUPT20H-220ENST00000490716 FMN1Q68DA7 1419 aa15.4■□□□□ 0.06
SUPT20H-220ENST00000490716 KIF14Q15058 1648 aa15.39■□□□□ 0.05
SUPT20H-220ENST00000490716 KDM6BO15054 1643 aa15.38■□□□□ 0.05
SUPT20H-220ENST00000490716 CDC42BPAQ5VT25 1732 aa15.37■□□□□ 0.05
SUPT20H-220ENST00000490716 MYO5CQ9NQX4 1742 aa15.36■□□□□ 0.05
SUPT20H-220ENST00000490716 PREX2Q70Z35 1606 aa15.34■□□□□ 0.05
SUPT20H-220ENST00000490716 SIGLEC1Q9BZZ2 1709 aa15.34■□□□□ 0.05
SUPT20H-220ENST00000490716 CFAP74Q9C0B2 1584 aa15.34■□□□□ 0.05
SUPT20H-220ENST00000490716 CCDC18Q5T9S5 1454 aa15.32■□□□□ 0.04
SUPT20H-220ENST00000490716 FAM9AQ8IZU1 332 aaPredicted RBP15.32■□□□□ 0.04
SUPT20H-220ENST00000490716 ZMYM4Q5VZL5 1548 aa15.31■□□□□ 0.04
SUPT20H-220ENST00000490716 TEX14Q8IWB6 1497 aa15.31■□□□□ 0.04
SUPT20H-220ENST00000490716 NEO1Q92859 1461 aa15.3■□□□□ 0.04
SUPT20H-220ENST00000490716 CLIP1P30622 1438 aa15.29■□□□□ 0.04
SUPT20H-220ENST00000490716 FAM69CQ0P6D2 419 aa15.29■□□□□ 0.04
SUPT20H-220ENST00000490716 MAP3K1Q13233 1512 aa15.29■□□□□ 0.04
SUPT20H-220ENST00000490716 CEP162Q5TB80 1403 aa15.29■□□□□ 0.04
SUPT20H-220ENST00000490716 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
SUPT20H-220ENST00000490716 KDM5CP41229 1560 aa15.26■□□□□ 0.03
SUPT20H-220ENST00000490716 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
SUPT20H-220ENST00000490716 P3H3Q8IVL6 736 aa15.25■□□□□ 0.03
SUPT20H-220ENST00000490716 TROQ12816 1431 aaPredicted RBP15.24■□□□□ 0.03
SUPT20H-220ENST00000490716 NPM1P06748 294 aaKnown RBP eCLIP15.23■□□□□ 0.03
SUPT20H-220ENST00000490716 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
SUPT20H-220ENST00000490716 PHLDB1Q86UU1 1377 aa15.23■□□□□ 0.03
SUPT20H-220ENST00000490716 TIAM1Q13009 1591 aa15.22■□□□□ 0.03
SUPT20H-220ENST00000490716 PLCH2O75038 1416 aa15.22■□□□□ 0.03
SUPT20H-220ENST00000490716 SAMD9LQ8IVG5 1584 aa15.19■□□□□ 0.02
SUPT20H-220ENST00000490716 ABCC1P33527 1531 aa15.19■□□□□ 0.02
SUPT20H-220ENST00000490716 REREQ9P2R6 1566 aa15.19■□□□□ 0.02
SUPT20H-220ENST00000490716 ARHGEF40Q8TER5 1519 aa15.19■□□□□ 0.02
SUPT20H-220ENST00000490716 ADAMTSL3P82987 1691 aa15.18■□□□□ 0.02
SUPT20H-220ENST00000490716 EHBP1L1Q8N3D4 1523 aa15.17■□□□□ 0.02
SUPT20H-220ENST00000490716 ARHGEF12Q9NZN5 1544 aa15.17■□□□□ 0.02
SUPT20H-220ENST00000490716 UBTFP17480 764 aaKnown RBP15.16■□□□□ 0.02
SUPT20H-220ENST00000490716 VPS8Q8N3P4 1428 aa15.15■□□□□ 0.02
SUPT20H-220ENST00000490716 KIDINS220Q9ULH0 1771 aa15.14■□□□□ 0.01
SUPT20H-220ENST00000490716 FANCAO15360 1455 aa15.14■□□□□ 0.01
SUPT20H-220ENST00000490716 BCORL1Q5H9F3 1711 aa15.13■□□□□ 0.01
SUPT20H-220ENST00000490716 GPATCH8Q9UKJ3 1502 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms