RNA–Protein interactions for RNA: ENST00000490355.6

KCNT1-209, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNT1, Length 3,708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-209ENST00000490355 VPS8Q8N3P4 1428 aa20.27■□□□□ 0.84
KCNT1-209ENST00000490355 FBLN2P98095 1184 aa20.27■□□□□ 0.83
KCNT1-209ENST00000490355 NBR1Q14596 966 aa20.27■□□□□ 0.83
KCNT1-209ENST00000490355 NPM2Q86SE8 214 aaKnown RBP20.26■□□□□ 0.83
KCNT1-209ENST00000490355 ANP32EQ9BTT0 268 aa20.22■□□□□ 0.83
KCNT1-209ENST00000490355 CCNB3Q8WWL7 1395 aa20.2■□□□□ 0.82
KCNT1-209ENST00000490355 MRS2Q9HD23 443 aa20.19■□□□□ 0.82
KCNT1-209ENST00000490355 KIF21BO75037 1637 aa20.19■□□□□ 0.82
KCNT1-209ENST00000490355 FOXD1Q16676 465 aa20.17■□□□□ 0.82
KCNT1-209ENST00000490355 DHX57Q6P158 1386 aaKnown RBP20.17■□□□□ 0.82
KCNT1-209ENST00000490355 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
KCNT1-209ENST00000490355 RAB3GAP2Q9H2M9 1393 aa20.14■□□□□ 0.81
KCNT1-209ENST00000490355 RBM19Q9Y4C8 960 aaKnown RBP20.13■□□□□ 0.81
KCNT1-209ENST00000490355 MYT1LQ9UL68 1186 aa20.13■□□□□ 0.81
KCNT1-209ENST00000490355 B4GALNT3Q6L9W6 998 aa20.12■□□□□ 0.81
KCNT1-209ENST00000490355 TOP2BQ02880 1626 aa20.11■□□□□ 0.81
KCNT1-209ENST00000490355 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
KCNT1-209ENST00000490355 KDM2AQ9Y2K7 1162 aa20.1■□□□□ 0.81
KCNT1-209ENST00000490355 HMGXB3Q12766 1538 aa20.09■□□□□ 0.81
KCNT1-209ENST00000490355 RTL5Q5HYW3 569 aaPredicted RBP20.09■□□□□ 0.81
KCNT1-209ENST00000490355 CLSPNQ9HAW4 1339 aa20.07■□□□□ 0.8
KCNT1-209ENST00000490355 KIF27Q86VH2 1401 aa20.05■□□□□ 0.8
KCNT1-209ENST00000490355 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
KCNT1-209ENST00000490355 DAXXQ9UER7 740 aaPredicted RBP20■□□□□ 0.79
KCNT1-209ENST00000490355 CCDC136Q96JN2 1154 aa19.99■□□□□ 0.79
KCNT1-209ENST00000490355 EIF4G2P78344 907 aaKnown RBP eCLIP19.99■□□□□ 0.79
KCNT1-209ENST00000490355 BIVM-ERCC5R4GMW8 1640 aa19.97■□□□□ 0.79
KCNT1-209ENST00000490355 CFTRP13569 1480 aa19.97■□□□□ 0.79
KCNT1-209ENST00000490355 CUX1P39880 1505 aa19.96■□□□□ 0.79
KCNT1-209ENST00000490355 BCL11AQ9H165 835 aa19.95■□□□□ 0.78
KCNT1-209ENST00000490355 CUX2O14529 1486 aa19.94■□□□□ 0.78
KCNT1-209ENST00000490355 PRXQ9BXM0 1461 aa19.93■□□□□ 0.78
KCNT1-209ENST00000490355 PPP1R15AO75807 674 aaPredicted RBP19.93■□□□□ 0.78
KCNT1-209ENST00000490355 TMC1Q8TDI8 760 aa19.93■□□□□ 0.78
KCNT1-209ENST00000490355 ERICH3Q5RHP9 1530 aa19.91■□□□□ 0.78
KCNT1-209ENST00000490355 CARMIL1Q5VZK9 1371 aa19.91■□□□□ 0.78
KCNT1-209ENST00000490355 SETD5Q9C0A6 1442 aa19.91■□□□□ 0.78
KCNT1-209ENST00000490355 HSPA5P11021 654 aaKnown RBP19.9■□□□□ 0.78
KCNT1-209ENST00000490355 ANP32AP39687 249 aaKnown RBP19.88■□□□□ 0.77
KCNT1-209ENST00000490355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.77
KCNT1-209ENST00000490355 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
KCNT1-209ENST00000490355 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
KCNT1-209ENST00000490355 RGL3Q3MIN7 710 aa19.86■□□□□ 0.77
KCNT1-209ENST00000490355 RTN4Q9NQC3 1192 aaKnown RBP19.81■□□□□ 0.76
KCNT1-209ENST00000490355 ARAP1Q96P48 1450 aa19.8■□□□□ 0.76
KCNT1-209ENST00000490355 FHOD3Q2V2M9 1422 aa19.8■□□□□ 0.76
KCNT1-209ENST00000490355 ZBTB47Q9UFB7 747 aaPredicted RBP19.75■□□□□ 0.75
KCNT1-209ENST00000490355 IGF1RP08069 1367 aa19.75■□□□□ 0.75
KCNT1-209ENST00000490355 LAS1LQ9Y4W2 734 aaKnown RBP19.75■□□□□ 0.75
KCNT1-209ENST00000490355 ARXQ96QS3 562 aa19.74■□□□□ 0.75
KCNT1-209ENST00000490355 L3MBTL2Q969R5 705 aa19.74■□□□□ 0.75
KCNT1-209ENST00000490355 TDRD9Q8NDG6 1382 aaKnown RBP19.74■□□□□ 0.75
KCNT1-209ENST00000490355 PHLDB1Q86UU1 1377 aa19.72■□□□□ 0.75
KCNT1-209ENST00000490355 PPP4R2Q9NY27 417 aa19.72■□□□□ 0.75
KCNT1-209ENST00000490355 FGD5Q6ZNL6 1462 aa19.72■□□□□ 0.75
KCNT1-209ENST00000490355 CCER2I3L3R5 266 aa19.72■□□□□ 0.75
KCNT1-209ENST00000490355 CCDC184Q52MB2 194 aa19.7■□□□□ 0.74
KCNT1-209ENST00000490355 ARHGAP35Q9NRY4 1499 aa19.68■□□□□ 0.74
KCNT1-209ENST00000490355 CC2D2AQ9P2K1 1620 aa19.68■□□□□ 0.74
KCNT1-209ENST00000490355 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
KCNT1-209ENST00000490355 MPHOSPH9Q99550 1183 aa19.63■□□□□ 0.73
KCNT1-209ENST00000490355 CARD11Q9BXL7 1154 aa19.63■□□□□ 0.73
KCNT1-209ENST00000490355 EIF5BO60841 1220 aaKnown RBP19.62■□□□□ 0.73
KCNT1-209ENST00000490355 DEKP35659 375 aaKnown RBP19.61■□□□□ 0.73
KCNT1-209ENST00000490355 CC2D1BQ5T0F9 858 aaKnown RBP19.61■□□□□ 0.73
KCNT1-209ENST00000490355 CFDP1Q9UEE9 299 aaPredicted RBP19.6■□□□□ 0.73
KCNT1-209ENST00000490355 PRDM2Q13029 1718 aa19.59■□□□□ 0.73
KCNT1-209ENST00000490355 CANXP27824 592 aaKnown RBP19.58■□□□□ 0.73
KCNT1-209ENST00000490355 FHAD1B1AJZ9 1412 aa19.58■□□□□ 0.72
KCNT1-209ENST00000490355 NOP58Q9Y2X3 529 aaKnown RBP19.57■□□□□ 0.72
KCNT1-209ENST00000490355 RRBP1Q9P2E9 1410 aaKnown RBP19.57■□□□□ 0.72
KCNT1-209ENST00000490355 DCAF11Q8TEB1 546 aa19.55■□□□□ 0.72
KCNT1-209ENST00000490355 RAD54L2Q9Y4B4 1467 aa19.55■□□□□ 0.72
KCNT1-209ENST00000490355 TSPY4P0CV99 314 aa19.54■□□□□ 0.72
KCNT1-209ENST00000490355 TSPY10P0CW01 314 aa19.54■□□□□ 0.72
KCNT1-209ENST00000490355 CHGAP10645 457 aaKnown RBP19.54■□□□□ 0.72
KCNT1-209ENST00000490355 TIMELESSQ9UNS1 1208 aa19.53■□□□□ 0.72
KCNT1-209ENST00000490355 PKD2Q13563 968 aa19.51■□□□□ 0.71
KCNT1-209ENST00000490355 WASHC2AQ641Q2 1341 aa19.51■□□□□ 0.71
KCNT1-209ENST00000490355 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
KCNT1-209ENST00000490355 PRKRIP1Q9H875 184 aaPredicted RBP19.51■□□□□ 0.71
KCNT1-209ENST00000490355 ZNF644Q9H582 1327 aaPredicted RBP19.51■□□□□ 0.71
KCNT1-209ENST00000490355 NESP48681 1621 aa19.51■□□□□ 0.71
KCNT1-209ENST00000490355 WDR97A6NE52 1622 aa19.5■□□□□ 0.71
KCNT1-209ENST00000490355 RGS3P49796 1198 aa19.5■□□□□ 0.71
KCNT1-209ENST00000490355 MSH5O43196 834 aa19.48■□□□□ 0.71
KCNT1-209ENST00000490355 NEUROD2Q15784 382 aa19.48■□□□□ 0.71
KCNT1-209ENST00000490355 TOPBP1Q92547 1522 aa19.47■□□□□ 0.71
KCNT1-209ENST00000490355 DNMBPQ6XZF7 1577 aa19.47■□□□□ 0.71
KCNT1-209ENST00000490355 PLIN1O60240 522 aa19.46■□□□□ 0.71
KCNT1-209ENST00000490355 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
KCNT1-209ENST00000490355 NEFMP07197 916 aa19.46■□□□□ 0.71
KCNT1-209ENST00000490355 TIAM1Q13009 1591 aa19.44■□□□□ 0.7
KCNT1-209ENST00000490355 TNNT2P45379 298 aaPredicted RBP19.43■□□□□ 0.7
KCNT1-209ENST00000490355 LRRC9Q6ZRR7 1453 aa19.43■□□□□ 0.7
KCNT1-209ENST00000490355 C11orf95C9JLR9 678 aaPredicted RBP19.42■□□□□ 0.7
KCNT1-209ENST00000490355 ABCA10Q8WWZ4 1543 aa19.42■□□□□ 0.7
KCNT1-209ENST00000490355 SLC4A3P48751 1232 aa19.41■□□□□ 0.7
KCNT1-209ENST00000490355 WDR43Q15061 677 aaKnown RBP eCLIP19.4■□□□□ 0.7
KCNT1-209ENST00000490355 CCDC18Q5T9S5 1454 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms