RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 FBLN2P98095 1184 aa21.02■□□□□ 0.96
HLA-DOA-205ENST00000490305 RANGAP1P46060 587 aaPredicted RBP21■□□□□ 0.95
HLA-DOA-205ENST00000490305 KIAA0586Q9BVV6 1533 aa20.99■□□□□ 0.95
HLA-DOA-205ENST00000490305 CHD1O14646 1710 aa20.99■□□□□ 0.95
HLA-DOA-205ENST00000490305 IQGAP2Q13576 1575 aa20.99■□□□□ 0.95
HLA-DOA-205ENST00000490305 EFCAB5A4FU69 1503 aa20.99■□□□□ 0.95
HLA-DOA-205ENST00000490305 NUP160Q12769 1436 aa20.98■□□□□ 0.95
HLA-DOA-205ENST00000490305 CEP170Q5SW79 1584 aa20.97■□□□□ 0.95
HLA-DOA-205ENST00000490305 ARHGAP35Q9NRY4 1499 aa20.95■□□□□ 0.94
HLA-DOA-205ENST00000490305 ARAP1Q96P48 1450 aa20.92■□□□□ 0.94
HLA-DOA-205ENST00000490305 SAMD9Q5K651 1589 aa20.9■□□□□ 0.94
HLA-DOA-205ENST00000490305 UGGT2Q9NYU1 1516 aa20.9■□□□□ 0.94
HLA-DOA-205ENST00000490305 VPS8Q8N3P4 1428 aa20.9■□□□□ 0.94
HLA-DOA-205ENST00000490305 FHOD3Q2V2M9 1422 aa20.79■□□□□ 0.92
HLA-DOA-205ENST00000490305 P3H3Q8IVL6 736 aa20.79■□□□□ 0.92
HLA-DOA-205ENST00000490305 JPH4Q96JJ6 628 aa20.79■□□□□ 0.92
HLA-DOA-205ENST00000490305 KIAA0556O60303 1618 aa20.78■□□□□ 0.92
HLA-DOA-205ENST00000490305 FMN1Q68DA7 1419 aa20.78■□□□□ 0.92
HLA-DOA-205ENST00000490305 CARMIL2Q6F5E8 1435 aa20.77■□□□□ 0.91
HLA-DOA-205ENST00000490305 DISP1Q96F81 1524 aa20.76■□□□□ 0.91
HLA-DOA-205ENST00000490305 CLASP1Q7Z460 1538 aa20.75■□□□□ 0.91
HLA-DOA-205ENST00000490305 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
HLA-DOA-205ENST00000490305 APLP2Q06481 763 aa20.72■□□□□ 0.91
HLA-DOA-205ENST00000490305 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
HLA-DOA-205ENST00000490305 CASKIN1Q8WXD9 1431 aa20.68■□□□□ 0.9
HLA-DOA-205ENST00000490305 PRG4Q92954 1404 aaPredicted RBP20.68■□□□□ 0.9
HLA-DOA-205ENST00000490305 FYCO1Q9BQS8 1478 aa20.68■□□□□ 0.9
HLA-DOA-205ENST00000490305 PCF11O94913 1555 aaKnown RBP20.67■□□□□ 0.9
HLA-DOA-205ENST00000490305 MAP3K1Q13233 1512 aa20.63■□□□□ 0.89
HLA-DOA-205ENST00000490305 HECW1Q76N89 1606 aa20.59■□□□□ 0.89
HLA-DOA-205ENST00000490305 TIAM1Q13009 1591 aa20.57■□□□□ 0.88
HLA-DOA-205ENST00000490305 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
HLA-DOA-205ENST00000490305 CFAP43Q8NDM7 1665 aa20.56■□□□□ 0.88
HLA-DOA-205ENST00000490305 RAPGEF6Q8TEU7 1601 aa20.56■□□□□ 0.88
HLA-DOA-205ENST00000490305 PTPRGP23470 1445 aa20.54■□□□□ 0.88
HLA-DOA-205ENST00000490305 CCDC18Q5T9S5 1454 aa20.54■□□□□ 0.88
HLA-DOA-205ENST00000490305 PPARGC1BQ86YN6 1023 aaKnown RBP20.52■□□□□ 0.88
HLA-DOA-205ENST00000490305 TTBK1Q5TCY1 1321 aaPredicted RBP20.52■□□□□ 0.87
HLA-DOA-205ENST00000490305 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
HLA-DOA-205ENST00000490305 ABCA8O94911 1581 aa20.5■□□□□ 0.87
HLA-DOA-205ENST00000490305 LRRIQ1Q96JM4 1722 aa20.5■□□□□ 0.87
HLA-DOA-205ENST00000490305 EPRSP07814 1512 aaKnown RBP20.48■□□□□ 0.87
HLA-DOA-205ENST00000490305 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
HLA-DOA-205ENST00000490305 PLB1Q6P1J6 1458 aa20.47■□□□□ 0.87
HLA-DOA-205ENST00000490305 LRRC9Q6ZRR7 1453 aa20.46■□□□□ 0.87
HLA-DOA-205ENST00000490305 NUP153P49790 1475 aaKnown RBP20.45■□□□□ 0.86
HLA-DOA-205ENST00000490305 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
HLA-DOA-205ENST00000490305 UACAQ9BZF9 1416 aa20.43■□□□□ 0.86
HLA-DOA-205ENST00000490305 EHBP1L1Q8N3D4 1523 aa20.39■□□□□ 0.85
HLA-DOA-205ENST00000490305 MTUS2Q5JR59 1369 aa20.39■□□□□ 0.85
HLA-DOA-205ENST00000490305 CDK13Q14004 1512 aaKnown RBP20.38■□□□□ 0.85
HLA-DOA-205ENST00000490305 CDK11AQ9UQ88 783 aaPredicted RBP20.38■□□□□ 0.85
HLA-DOA-205ENST00000490305 ABCC2Q92887 1545 aa20.37■□□□□ 0.85
HLA-DOA-205ENST00000490305 UHRF1BP1LA0JNW5 1464 aa20.37■□□□□ 0.85
HLA-DOA-205ENST00000490305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
HLA-DOA-205ENST00000490305 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
HLA-DOA-205ENST00000490305 SUPT6HQ7KZ85 1726 aaKnown RBP20.33■□□□□ 0.85
HLA-DOA-205ENST00000490305 ATP10BO94823 1461 aa20.32■□□□□ 0.84
HLA-DOA-205ENST00000490305 ARID3CA6NKF2 412 aa20.32■□□□□ 0.84
HLA-DOA-205ENST00000490305 PCGF6Q9BYE7 350 aa20.31■□□□□ 0.84
HLA-DOA-205ENST00000490305 ARHGEF11O15085 1522 aa20.31■□□□□ 0.84
HLA-DOA-205ENST00000490305 MAGI3Q5TCQ9 1506 aa20.31■□□□□ 0.84
HLA-DOA-205ENST00000490305 PLEKHD1A6NEE1 506 aa20.27■□□□□ 0.84
HLA-DOA-205ENST00000490305 TROQ12816 1431 aaPredicted RBP20.27■□□□□ 0.83
HLA-DOA-205ENST00000490305 NCOA2Q15596 1464 aa20.25■□□□□ 0.83
HLA-DOA-205ENST00000490305 ADCY10Q96PN6 1610 aa20.25■□□□□ 0.83
HLA-DOA-205ENST00000490305 KDM5BQ9UGL1 1544 aa20.25■□□□□ 0.83
HLA-DOA-205ENST00000490305 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
HLA-DOA-205ENST00000490305 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
HLA-DOA-205ENST00000490305 ZCCHC11Q5TAX3 1644 aaKnown RBP20.24■□□□□ 0.83
HLA-DOA-205ENST00000490305 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
HLA-DOA-205ENST00000490305 RRBP1Q9P2E9 1410 aaKnown RBP20.23■□□□□ 0.83
HLA-DOA-205ENST00000490305 PHLDB1Q86UU1 1377 aa20.22■□□□□ 0.83
HLA-DOA-205ENST00000490305 KIF14Q15058 1648 aa20.18■□□□□ 0.82
HLA-DOA-205ENST00000490305 CCNB3Q8WWL7 1395 aa20.18■□□□□ 0.82
HLA-DOA-205ENST00000490305 MYOM3Q5VTT5 1437 aa20.18■□□□□ 0.82
HLA-DOA-205ENST00000490305 NPM1P06748 294 aaKnown RBP eCLIP20.15■□□□□ 0.82
HLA-DOA-205ENST00000490305 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
HLA-DOA-205ENST00000490305 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.13■□□□□ 0.81
HLA-DOA-205ENST00000490305 MIA2Q96PC5 1412 aa20.12■□□□□ 0.81
HLA-DOA-205ENST00000490305 ITSN2Q9NZM3 1697 aa20.12■□□□□ 0.81
HLA-DOA-205ENST00000490305 ABCC10Q5T3U5 1492 aa20.08■□□□□ 0.81
HLA-DOA-205ENST00000490305 CYB5RLQ6IPT4 315 aa20.08■□□□□ 0.81
HLA-DOA-205ENST00000490305 WDR7Q9Y4E6 1490 aa20.07■□□□□ 0.8
HLA-DOA-205ENST00000490305 PTPN23Q9H3S7 1636 aa20.07■□□□□ 0.8
HLA-DOA-205ENST00000490305 TCOF1Q13428 1488 aaKnown RBP20.05■□□□□ 0.8
HLA-DOA-205ENST00000490305 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
HLA-DOA-205ENST00000490305 GPATCH8Q9UKJ3 1502 aaKnown RBP20.05■□□□□ 0.8
HLA-DOA-205ENST00000490305 CDC42BPAQ5VT25 1732 aa20.04■□□□□ 0.8
HLA-DOA-205ENST00000490305 ASXL2Q76L83 1435 aa20.03■□□□□ 0.8
HLA-DOA-205ENST00000490305 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.02■□□□□ 0.8
HLA-DOA-205ENST00000490305 KCNH8Q96L42 1107 aa20.01■□□□□ 0.79
HLA-DOA-205ENST00000490305 CFDP1Q9UEE9 299 aaPredicted RBP20.01■□□□□ 0.79
HLA-DOA-205ENST00000490305 MYO5CQ9NQX4 1742 aa19.99■□□□□ 0.79
HLA-DOA-205ENST00000490305 PREX2Q70Z35 1606 aa19.99■□□□□ 0.79
HLA-DOA-205ENST00000490305 TTC37Q6PGP7 1564 aa19.99■□□□□ 0.79
HLA-DOA-205ENST00000490305 MAPKBP1O60336 1514 aa19.98■□□□□ 0.79
HLA-DOA-205ENST00000490305 CDC42BPBQ9Y5S2 1711 aa19.96■□□□□ 0.79
HLA-DOA-205ENST00000490305 ABCA9Q8IUA7 1624 aa19.95■□□□□ 0.78
HLA-DOA-205ENST00000490305 CAMSAP2Q08AD1 1489 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms