RNA–Protein interactions for RNA: ENST00000490251.1

COA1-219, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 2

Gene COA1, Length 2,135 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-219ENST00000490251 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
COA1-219ENST00000490251 APLP2Q06481 763 aa13.6□□□□□ -0.23
COA1-219ENST00000490251 SNAPC4Q5SXM2 1469 aa13.6□□□□□ -0.23
COA1-219ENST00000490251 VPS8Q8N3P4 1428 aa13.58□□□□□ -0.24
COA1-219ENST00000490251 ARAP1Q96P48 1450 aa13.58□□□□□ -0.24
COA1-219ENST00000490251 ARHGAP35Q9NRY4 1499 aa13.58□□□□□ -0.24
COA1-219ENST00000490251 ATP1B4Q9UN42 357 aaPredicted RBP13.57□□□□□ -0.24
COA1-219ENST00000490251 ADAMTS12P58397 1594 aa13.56□□□□□ -0.24
COA1-219ENST00000490251 CTTNBP2Q8WZ74 1663 aa13.52□□□□□ -0.25
COA1-219ENST00000490251 FHOD3Q2V2M9 1422 aa13.51□□□□□ -0.25
COA1-219ENST00000490251 MAGI1Q96QZ7 1491 aaPredicted RBP13.51□□□□□ -0.25
COA1-219ENST00000490251 SYNJ2O15056 1496 aa13.49□□□□□ -0.25
COA1-219ENST00000490251 GRIN2AQ12879 1464 aa13.49□□□□□ -0.25
COA1-219ENST00000490251 KANK4Q5T7N3 995 aaPredicted RBP13.45□□□□□ -0.26
COA1-219ENST00000490251 IQGAP2Q13576 1575 aa13.43□□□□□ -0.26
COA1-219ENST00000490251 EFCAB5A4FU69 1503 aa13.43□□□□□ -0.26
COA1-219ENST00000490251 KIAA0586Q9BVV6 1533 aa13.42□□□□□ -0.26
COA1-219ENST00000490251 AEBP2Q6ZN18 517 aaPredicted RBP13.41□□□□□ -0.26
COA1-219ENST00000490251 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
COA1-219ENST00000490251 CEP170Q5SW79 1584 aa13.4□□□□□ -0.26
COA1-219ENST00000490251 ARID3CA6NKF2 412 aa13.39□□□□□ -0.27
COA1-219ENST00000490251 FMN1Q68DA7 1419 aa13.38□□□□□ -0.27
COA1-219ENST00000490251 SAMD9Q5K651 1589 aa13.37□□□□□ -0.27
COA1-219ENST00000490251 NUP160Q12769 1436 aa13.36□□□□□ -0.27
COA1-219ENST00000490251 PCF11O94913 1555 aaKnown RBP13.35□□□□□ -0.27
COA1-219ENST00000490251 UGGT2Q9NYU1 1516 aa13.34□□□□□ -0.27
COA1-219ENST00000490251 CASKIN1Q8WXD9 1431 aa13.34□□□□□ -0.27
COA1-219ENST00000490251 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
COA1-219ENST00000490251 CHD1O14646 1710 aa13.33□□□□□ -0.28
COA1-219ENST00000490251 DISP1Q96F81 1524 aa13.32□□□□□ -0.28
COA1-219ENST00000490251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
COA1-219ENST00000490251 HNRNPUL2Q1KMD3 747 aaKnown RBP13.31□□□□□ -0.28
COA1-219ENST00000490251 FYCO1Q9BQS8 1478 aa13.31□□□□□ -0.28
COA1-219ENST00000490251 TIAM1Q13009 1591 aa13.3□□□□□ -0.28
COA1-219ENST00000490251 CARMIL2Q6F5E8 1435 aa13.3□□□□□ -0.28
COA1-219ENST00000490251 KIAA0556O60303 1618 aa13.29□□□□□ -0.28
COA1-219ENST00000490251 PRG4Q92954 1404 aaPredicted RBP13.28□□□□□ -0.28
COA1-219ENST00000490251 LRRC9Q6ZRR7 1453 aa13.27□□□□□ -0.28
COA1-219ENST00000490251 MTUS2Q5JR59 1369 aa13.26□□□□□ -0.29
COA1-219ENST00000490251 OSCARQ8IYS5 282 aa13.25□□□□□ -0.29
COA1-219ENST00000490251 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
COA1-219ENST00000490251 ITGAEP38570 1179 aa13.25□□□□□ -0.29
COA1-219ENST00000490251 PLB1Q6P1J6 1458 aa13.22□□□□□ -0.29
COA1-219ENST00000490251 PTPRGP23470 1445 aa13.21□□□□□ -0.3
COA1-219ENST00000490251 FAM50AQ14320 339 aaKnown RBP13.21□□□□□ -0.3
COA1-219ENST00000490251 CFAP43Q8NDM7 1665 aa13.2□□□□□ -0.3
COA1-219ENST00000490251 CDK13Q14004 1512 aaKnown RBP13.2□□□□□ -0.3
COA1-219ENST00000490251 PHLDB1Q86UU1 1377 aa13.2□□□□□ -0.3
COA1-219ENST00000490251 LRRIQ1Q96JM4 1722 aa13.2□□□□□ -0.3
COA1-219ENST00000490251 EPRSP07814 1512 aaKnown RBP13.2□□□□□ -0.3
COA1-219ENST00000490251 HECW1Q76N89 1606 aa13.2□□□□□ -0.3
COA1-219ENST00000490251 HRCP23327 699 aa13.19□□□□□ -0.3
COA1-219ENST00000490251 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
COA1-219ENST00000490251 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
COA1-219ENST00000490251 RAPGEF6Q8TEU7 1601 aa13.17□□□□□ -0.3
COA1-219ENST00000490251 CDK11AQ9UQ88 783 aaPredicted RBP13.17□□□□□ -0.3
COA1-219ENST00000490251 NUP153P49790 1475 aaKnown RBP13.17□□□□□ -0.3
COA1-219ENST00000490251 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
COA1-219ENST00000490251 CCER1Q8TC90 406 aaPredicted RBP13.16□□□□□ -0.3
COA1-219ENST00000490251 MAGI3Q5TCQ9 1506 aa13.14□□□□□ -0.31
COA1-219ENST00000490251 RRBP1Q9P2E9 1410 aaKnown RBP13.14□□□□□ -0.31
COA1-219ENST00000490251 CLASP1Q7Z460 1538 aa13.13□□□□□ -0.31
COA1-219ENST00000490251 PLEKHD1A6NEE1 506 aa13.12□□□□□ -0.31
COA1-219ENST00000490251 NCOA2Q15596 1464 aa13.12□□□□□ -0.31
COA1-219ENST00000490251 SHROOM2Q13796 1616 aa13.12□□□□□ -0.31
COA1-219ENST00000490251 EHBP1L1Q8N3D4 1523 aa13.1□□□□□ -0.31
COA1-219ENST00000490251 SUPT6HQ7KZ85 1726 aaKnown RBP13.09□□□□□ -0.31
COA1-219ENST00000490251 ABCA8O94911 1581 aa13.09□□□□□ -0.31
COA1-219ENST00000490251 UACAQ9BZF9 1416 aa13.08□□□□□ -0.32
COA1-219ENST00000490251 ATP10BO94823 1461 aa13.08□□□□□ -0.32
COA1-219ENST00000490251 FGD6Q6ZV73 1430 aa13.07□□□□□ -0.32
COA1-219ENST00000490251 MYOM3Q5VTT5 1437 aa13.06□□□□□ -0.32
COA1-219ENST00000490251 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
COA1-219ENST00000490251 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
COA1-219ENST00000490251 TROQ12816 1431 aaPredicted RBP13.04□□□□□ -0.32
COA1-219ENST00000490251 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
COA1-219ENST00000490251 RIMBP3CA6NJZ7 1639 aa13.02□□□□□ -0.33
COA1-219ENST00000490251 RIMBP3BA6NNM3 1639 aa13.02□□□□□ -0.33
COA1-219ENST00000490251 RIMBP3Q9UFD9 1639 aa13.02□□□□□ -0.33
COA1-219ENST00000490251 ZEB1P37275 1124 aaPredicted RBP13.01□□□□□ -0.33
COA1-219ENST00000490251 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
COA1-219ENST00000490251 CHIC2Q9UKJ5 165 aa13.01□□□□□ -0.33
COA1-219ENST00000490251 ZNF644Q9H582 1327 aaPredicted RBP13.01□□□□□ -0.33
COA1-219ENST00000490251 ABCC2Q92887 1545 aa12.99□□□□□ -0.33
COA1-219ENST00000490251 KIF14Q15058 1648 aa12.98□□□□□ -0.33
COA1-219ENST00000490251 PTPN23Q9H3S7 1636 aa12.97□□□□□ -0.33
COA1-219ENST00000490251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.97□□□□□ -0.33
COA1-219ENST00000490251 CYB5RLQ6IPT4 315 aa12.97□□□□□ -0.33
COA1-219ENST00000490251 MIA2Q96PC5 1412 aa12.95□□□□□ -0.34
COA1-219ENST00000490251 RRP7BPQ9NSQ0 103 aa12.95□□□□□ -0.34
COA1-219ENST00000490251 RAB3GAP2Q9H2M9 1393 aa12.95□□□□□ -0.34
COA1-219ENST00000490251 PTPRKQ15262 1439 aa12.95□□□□□ -0.34
COA1-219ENST00000490251 NPM1P06748 294 aaKnown RBP eCLIP12.95□□□□□ -0.34
COA1-219ENST00000490251 GPATCH8Q9UKJ3 1502 aaKnown RBP12.94□□□□□ -0.34
COA1-219ENST00000490251 SETD5Q9C0A6 1442 aa12.94□□□□□ -0.34
COA1-219ENST00000490251 UHRF1BP1LA0JNW5 1464 aa12.92□□□□□ -0.34
COA1-219ENST00000490251 TCOF1Q13428 1488 aaKnown RBP12.91□□□□□ -0.34
COA1-219ENST00000490251 ZCCHC11Q5TAX3 1644 aaKnown RBP12.91□□□□□ -0.34
COA1-219ENST00000490251 KDM5BQ9UGL1 1544 aa12.91□□□□□ -0.34
COA1-219ENST00000490251 ADCY10Q96PN6 1610 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms