RNA–Protein interactions for RNA: ENST00000490179.2

TSC1-206, Transcript of TSC complex subunit 1, humanhuman

TSL 3

Gene TSC1, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-206ENST00000490179 CTTNBP2Q8WZ74 1663 aa24.1■■□□□ 1.45
TSC1-206ENST00000490179 EHMT2Q96KQ7 1210 aa24.08■■□□□ 1.45
TSC1-206ENST00000490179 DNAJC5Q9H3Z4 198 aa24.06■■□□□ 1.44
TSC1-206ENST00000490179 IQGAP2Q13576 1575 aa24.05■■□□□ 1.44
TSC1-206ENST00000490179 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
TSC1-206ENST00000490179 UBTFP17480 764 aaKnown RBP24.01■■□□□ 1.43
TSC1-206ENST00000490179 JPH4Q96JJ6 628 aa24■■□□□ 1.43
TSC1-206ENST00000490179 ARHGEF11O15085 1522 aa23.94■■□□□ 1.42
TSC1-206ENST00000490179 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
TSC1-206ENST00000490179 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
TSC1-206ENST00000490179 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
TSC1-206ENST00000490179 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
TSC1-206ENST00000490179 UGGT2Q9NYU1 1516 aa23.91■■□□□ 1.42
TSC1-206ENST00000490179 ERCC6L2Q5T890 1561 aa23.88■■□□□ 1.41
TSC1-206ENST00000490179 CARMIL2Q6F5E8 1435 aa23.87■■□□□ 1.41
TSC1-206ENST00000490179 TNIKQ9UKE5 1360 aa23.84■■□□□ 1.41
TSC1-206ENST00000490179 LOC105371045A0A1W2PR82 267 aa23.84■■□□□ 1.41
TSC1-206ENST00000490179 RANGAP1P46060 587 aaPredicted RBP23.84■■□□□ 1.41
TSC1-206ENST00000490179 DISP1Q96F81 1524 aa23.82■■□□□ 1.4
TSC1-206ENST00000490179 KIAA0556O60303 1618 aa23.81■■□□□ 1.4
TSC1-206ENST00000490179 ARAP1Q96P48 1450 aa23.77■■□□□ 1.4
TSC1-206ENST00000490179 SAMD9Q5K651 1589 aa23.77■■□□□ 1.4
TSC1-206ENST00000490179 EFCAB5A4FU69 1503 aa23.76■■□□□ 1.39
TSC1-206ENST00000490179 P3H3Q8IVL6 736 aa23.72■■□□□ 1.39
TSC1-206ENST00000490179 TTBK1Q5TCY1 1321 aaPredicted RBP23.71■■□□□ 1.39
TSC1-206ENST00000490179 CYB5RLQ6IPT4 315 aa23.71■■□□□ 1.39
TSC1-206ENST00000490179 PTPRGP23470 1445 aa23.7■■□□□ 1.38
TSC1-206ENST00000490179 CLIP1P30622 1438 aa23.67■■□□□ 1.38
TSC1-206ENST00000490179 ARHGAP35Q9NRY4 1499 aa23.66■■□□□ 1.38
TSC1-206ENST00000490179 FHOD3Q2V2M9 1422 aa23.65■■□□□ 1.38
TSC1-206ENST00000490179 CEP162Q5TB80 1403 aa23.65■■□□□ 1.38
TSC1-206ENST00000490179 UACAQ9BZF9 1416 aa23.55■■□□□ 1.36
TSC1-206ENST00000490179 FMN1Q68DA7 1419 aa23.53■■□□□ 1.36
TSC1-206ENST00000490179 PLB1Q6P1J6 1458 aa23.52■■□□□ 1.36
TSC1-206ENST00000490179 ABCA8O94911 1581 aa23.52■■□□□ 1.36
TSC1-206ENST00000490179 ADCY10Q96PN6 1610 aa23.51■■□□□ 1.35
TSC1-206ENST00000490179 ABCC2Q92887 1545 aa23.5■■□□□ 1.35
TSC1-206ENST00000490179 UHRF1BP1LA0JNW5 1464 aa23.49■■□□□ 1.35
TSC1-206ENST00000490179 RAPGEF6Q8TEU7 1601 aa23.49■■□□□ 1.35
TSC1-206ENST00000490179 NPM1P06748 294 aaKnown RBP eCLIP23.45■■□□□ 1.34
TSC1-206ENST00000490179 ATP1B4Q9UN42 357 aaPredicted RBP23.39■■□□□ 1.33
TSC1-206ENST00000490179 HECW1Q76N89 1606 aa23.39■■□□□ 1.33
TSC1-206ENST00000490179 PCF11O94913 1555 aaKnown RBP23.39■■□□□ 1.33
TSC1-206ENST00000490179 KDM5BQ9UGL1 1544 aa23.38■■□□□ 1.33
TSC1-206ENST00000490179 ZCCHC11Q5TAX3 1644 aaKnown RBP23.37■■□□□ 1.33
TSC1-206ENST00000490179 NUP153P49790 1475 aaKnown RBP23.37■■□□□ 1.33
TSC1-206ENST00000490179 CASKIN1Q8WXD9 1431 aa23.37■■□□□ 1.33
TSC1-206ENST00000490179 ARID3CA6NKF2 412 aa23.35■■□□□ 1.33
TSC1-206ENST00000490179 FYCO1Q9BQS8 1478 aa23.35■■□□□ 1.33
TSC1-206ENST00000490179 VPS8Q8N3P4 1428 aa23.33■■□□□ 1.33
TSC1-206ENST00000490179 ATP10BO94823 1461 aa23.32■■□□□ 1.32
TSC1-206ENST00000490179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.31■■□□□ 1.32
TSC1-206ENST00000490179 HNRNPUL2Q1KMD3 747 aaKnown RBP23.31■■□□□ 1.32
TSC1-206ENST00000490179 MAPKBP1O60336 1514 aa23.29■■□□□ 1.32
TSC1-206ENST00000490179 EPRSP07814 1512 aaKnown RBP23.28■■□□□ 1.32
TSC1-206ENST00000490179 LRRIQ1Q96JM4 1722 aa23.27■■□□□ 1.32
TSC1-206ENST00000490179 CDK13Q14004 1512 aaKnown RBP23.27■■□□□ 1.32
TSC1-206ENST00000490179 CCDC18Q5T9S5 1454 aa23.26■■□□□ 1.31
TSC1-206ENST00000490179 ASXL2Q76L83 1435 aa23.25■■□□□ 1.31
TSC1-206ENST00000490179 WDR7Q9Y4E6 1490 aa23.19■■□□□ 1.3
TSC1-206ENST00000490179 CDK11AQ9UQ88 783 aaPredicted RBP23.19■■□□□ 1.3
TSC1-206ENST00000490179 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
TSC1-206ENST00000490179 CFAP43Q8NDM7 1665 aa23.13■■□□□ 1.29
TSC1-206ENST00000490179 ABCC10Q5T3U5 1492 aa23.13■■□□□ 1.29
TSC1-206ENST00000490179 TRHP20396 242 aaPredicted RBP23.13■■□□□ 1.29
TSC1-206ENST00000490179 APLP2Q06481 763 aa23.12■■□□□ 1.29
TSC1-206ENST00000490179 KCNH8Q96L42 1107 aa23.12■■□□□ 1.29
TSC1-206ENST00000490179 DIP2BQ9P265 1576 aa23.12■■□□□ 1.29
TSC1-206ENST00000490179 TIAM1Q13009 1591 aa23.11■■□□□ 1.29
TSC1-206ENST00000490179 FAM69CQ0P6D2 419 aa23.09■■□□□ 1.29
TSC1-206ENST00000490179 KIF13AQ9H1H9 1805 aa23.09■■□□□ 1.29
TSC1-206ENST00000490179 TROQ12816 1431 aaPredicted RBP23.08■■□□□ 1.29
TSC1-206ENST00000490179 MAP3K1Q13233 1512 aa23.08■■□□□ 1.29
TSC1-206ENST00000490179 GLI2P10070 1586 aa23.06■■□□□ 1.28
TSC1-206ENST00000490179 MTUS2Q5JR59 1369 aa23.06■■□□□ 1.28
TSC1-206ENST00000490179 MAGI3Q5TCQ9 1506 aa23.06■■□□□ 1.28
TSC1-206ENST00000490179 KIF14Q15058 1648 aa23.04■■□□□ 1.28
TSC1-206ENST00000490179 EHBP1L1Q8N3D4 1523 aa23.03■■□□□ 1.28
TSC1-206ENST00000490179 ABCA9Q8IUA7 1624 aa23■■□□□ 1.27
TSC1-206ENST00000490179 LRRC9Q6ZRR7 1453 aa22.99■■□□□ 1.27
TSC1-206ENST00000490179 MAP3K4Q9Y6R4 1608 aa22.98■■□□□ 1.27
TSC1-206ENST00000490179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.98■■□□□ 1.27
TSC1-206ENST00000490179 KANK4Q5T7N3 995 aaPredicted RBP22.95■■□□□ 1.26
TSC1-206ENST00000490179 TTC37Q6PGP7 1564 aa22.95■■□□□ 1.26
TSC1-206ENST00000490179 CD109Q6YHK3 1445 aa22.95■■□□□ 1.26
TSC1-206ENST00000490179 TSPOAP1O95153 1857 aa22.94■■□□□ 1.26
TSC1-206ENST00000490179 SUPT6HQ7KZ85 1726 aaKnown RBP22.94■■□□□ 1.26
TSC1-206ENST00000490179 MYO5CQ9NQX4 1742 aa22.9■■□□□ 1.26
TSC1-206ENST00000490179 PPRC1Q5VV67 1664 aaKnown RBP22.87■■□□□ 1.25
TSC1-206ENST00000490179 NCOA2Q15596 1464 aa22.87■■□□□ 1.25
TSC1-206ENST00000490179 TEX14Q8IWB6 1497 aa22.86■■□□□ 1.25
TSC1-206ENST00000490179 CCNB3Q8WWL7 1395 aa22.85■■□□□ 1.25
TSC1-206ENST00000490179 PLCH2O75038 1416 aa22.84■■□□□ 1.25
TSC1-206ENST00000490179 CDC42BPAQ5VT25 1732 aa22.84■■□□□ 1.25
TSC1-206ENST00000490179 PREX2Q70Z35 1606 aa22.83■■□□□ 1.25
TSC1-206ENST00000490179 ITSN2Q9NZM3 1697 aa22.82■■□□□ 1.24
TSC1-206ENST00000490179 ARAP3Q8WWN8 1544 aa22.82■■□□□ 1.24
TSC1-206ENST00000490179 CFAP74Q9C0B2 1584 aa22.81■■□□□ 1.24
TSC1-206ENST00000490179 ARHGAP5Q13017 1502 aa22.81■■□□□ 1.24
TSC1-206ENST00000490179 CDC42BPBQ9Y5S2 1711 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms