RNA–Protein interactions for RNA: ENST00000490117.5

CPA4-208, Transcript of carboxypeptidase A4, humanhuman

TSL 2

Gene CPA4, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-208ENST00000490117 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
CPA4-208ENST00000490117 FBLN2P98095 1184 aa12.16□□□□□ -0.46
CPA4-208ENST00000490117 UBTFP17480 764 aaKnown RBP12.13□□□□□ -0.47
CPA4-208ENST00000490117 CHMP7Q8WUX9 453 aaPredicted RBP12.13□□□□□ -0.47
CPA4-208ENST00000490117 IQGAP2Q13576 1575 aa12.1□□□□□ -0.47
CPA4-208ENST00000490117 RANGAP1P46060 587 aaPredicted RBP12.09□□□□□ -0.47
CPA4-208ENST00000490117 NUP160Q12769 1436 aa12.08□□□□□ -0.48
CPA4-208ENST00000490117 TNIKQ9UKE5 1360 aa12.07□□□□□ -0.48
CPA4-208ENST00000490117 CLASP1Q7Z460 1538 aa12.07□□□□□ -0.48
CPA4-208ENST00000490117 CEP162Q5TB80 1403 aa12.04□□□□□ -0.48
CPA4-208ENST00000490117 KIAA0586Q9BVV6 1533 aa12.03□□□□□ -0.48
CPA4-208ENST00000490117 SAMD9Q5K651 1589 aa12.03□□□□□ -0.48
CPA4-208ENST00000490117 SHROOM2Q13796 1616 aa12.03□□□□□ -0.48
CPA4-208ENST00000490117 ERCC6L2Q5T890 1561 aa12.01□□□□□ -0.49
CPA4-208ENST00000490117 KIAA0556O60303 1618 aa12□□□□□ -0.49
CPA4-208ENST00000490117 CLIP1P30622 1438 aa12□□□□□ -0.49
CPA4-208ENST00000490117 UGGT2Q9NYU1 1516 aa12□□□□□ -0.49
CPA4-208ENST00000490117 ARHGAP35Q9NRY4 1499 aa11.99□□□□□ -0.49
CPA4-208ENST00000490117 EFCAB5A4FU69 1503 aa11.97□□□□□ -0.49
CPA4-208ENST00000490117 ARAP1Q96P48 1450 aa11.97□□□□□ -0.49
CPA4-208ENST00000490117 DISP1Q96F81 1524 aa11.96□□□□□ -0.49
CPA4-208ENST00000490117 FHOD3Q2V2M9 1422 aa11.96□□□□□ -0.49
CPA4-208ENST00000490117 P3H3Q8IVL6 736 aa11.96□□□□□ -0.49
CPA4-208ENST00000490117 OSCARQ8IYS5 282 aa11.94□□□□□ -0.5
CPA4-208ENST00000490117 LRRIQ1Q96JM4 1722 aa11.93□□□□□ -0.5
CPA4-208ENST00000490117 PRG4Q92954 1404 aaPredicted RBP11.93□□□□□ -0.5
CPA4-208ENST00000490117 PCF11O94913 1555 aaKnown RBP11.92□□□□□ -0.5
CPA4-208ENST00000490117 TTBK1Q5TCY1 1321 aaPredicted RBP11.92□□□□□ -0.5
CPA4-208ENST00000490117 JPH4Q96JJ6 628 aa11.92□□□□□ -0.5
CPA4-208ENST00000490117 RIMBP3CA6NJZ7 1639 aa11.9□□□□□ -0.5
CPA4-208ENST00000490117 RIMBP3BA6NNM3 1639 aa11.9□□□□□ -0.5
CPA4-208ENST00000490117 RIMBP3Q9UFD9 1639 aa11.9□□□□□ -0.5
CPA4-208ENST00000490117 CARMIL2Q6F5E8 1435 aa11.87□□□□□ -0.51
CPA4-208ENST00000490117 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
CPA4-208ENST00000490117 RAPGEF6Q8TEU7 1601 aa11.86□□□□□ -0.51
CPA4-208ENST00000490117 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
CPA4-208ENST00000490117 CFAP43Q8NDM7 1665 aa11.84□□□□□ -0.51
CPA4-208ENST00000490117 HECW1Q76N89 1606 aa11.83□□□□□ -0.52
CPA4-208ENST00000490117 ABCA8O94911 1581 aa11.83□□□□□ -0.52
CPA4-208ENST00000490117 PLB1Q6P1J6 1458 aa11.82□□□□□ -0.52
CPA4-208ENST00000490117 FMN1Q68DA7 1419 aa11.8□□□□□ -0.52
CPA4-208ENST00000490117 ADCY10Q96PN6 1610 aa11.8□□□□□ -0.52
CPA4-208ENST00000490117 PTPRGP23470 1445 aa11.79□□□□□ -0.52
CPA4-208ENST00000490117 FYCO1Q9BQS8 1478 aa11.79□□□□□ -0.52
CPA4-208ENST00000490117 ATP1B4Q9UN42 357 aaPredicted RBP11.79□□□□□ -0.52
CPA4-208ENST00000490117 CDK13Q14004 1512 aaKnown RBP11.78□□□□□ -0.52
CPA4-208ENST00000490117 ARID3CA6NKF2 412 aa11.78□□□□□ -0.52
CPA4-208ENST00000490117 CASKIN1Q8WXD9 1431 aa11.77□□□□□ -0.52
CPA4-208ENST00000490117 ZCCHC11Q5TAX3 1644 aaKnown RBP11.77□□□□□ -0.53
CPA4-208ENST00000490117 NUP153P49790 1475 aaKnown RBP11.76□□□□□ -0.53
CPA4-208ENST00000490117 ABCC2Q92887 1545 aa11.76□□□□□ -0.53
CPA4-208ENST00000490117 TIAM1Q13009 1591 aa11.76□□□□□ -0.53
CPA4-208ENST00000490117 UACAQ9BZF9 1416 aa11.74□□□□□ -0.53
CPA4-208ENST00000490117 EPRSP07814 1512 aaKnown RBP11.73□□□□□ -0.53
CPA4-208ENST00000490117 PPARGC1BQ86YN6 1023 aaKnown RBP11.73□□□□□ -0.53
CPA4-208ENST00000490117 MAGI3Q5TCQ9 1506 aa11.71□□□□□ -0.53
CPA4-208ENST00000490117 UHRF1BP1LA0JNW5 1464 aa11.7□□□□□ -0.54
CPA4-208ENST00000490117 CCDC18Q5T9S5 1454 aa11.7□□□□□ -0.54
CPA4-208ENST00000490117 MSH5O43196 834 aa11.69□□□□□ -0.54
CPA4-208ENST00000490117 PLPPR3Q6T4P5 718 aa11.69□□□□□ -0.54
CPA4-208ENST00000490117 CYB5RLQ6IPT4 315 aa11.68□□□□□ -0.54
CPA4-208ENST00000490117 ATP10BO94823 1461 aa11.68□□□□□ -0.54
CPA4-208ENST00000490117 KIF14Q15058 1648 aa11.68□□□□□ -0.54
CPA4-208ENST00000490117 MAP3K1Q13233 1512 aa11.66□□□□□ -0.54
CPA4-208ENST00000490117 EHBP1L1Q8N3D4 1523 aa11.66□□□□□ -0.54
CPA4-208ENST00000490117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.66□□□□□ -0.54
CPA4-208ENST00000490117 HNRNPUL2Q1KMD3 747 aaKnown RBP11.66□□□□□ -0.54
CPA4-208ENST00000490117 SUPT6HQ7KZ85 1726 aaKnown RBP11.66□□□□□ -0.54
CPA4-208ENST00000490117 KDM5BQ9UGL1 1544 aa11.65□□□□□ -0.54
CPA4-208ENST00000490117 APLP2Q06481 763 aa11.65□□□□□ -0.54
CPA4-208ENST00000490117 LRRC9Q6ZRR7 1453 aa11.64□□□□□ -0.55
CPA4-208ENST00000490117 KANK4Q5T7N3 995 aaPredicted RBP11.64□□□□□ -0.55
CPA4-208ENST00000490117 DNAJC5Q9H3Z4 198 aa11.63□□□□□ -0.55
CPA4-208ENST00000490117 CDC42BPAQ5VT25 1732 aa11.62□□□□□ -0.55
CPA4-208ENST00000490117 MTUS2Q5JR59 1369 aa11.61□□□□□ -0.55
CPA4-208ENST00000490117 TTC37Q6PGP7 1564 aa11.6□□□□□ -0.55
CPA4-208ENST00000490117 TROQ12816 1431 aaPredicted RBP11.6□□□□□ -0.55
CPA4-208ENST00000490117 KIF13AQ9H1H9 1805 aa11.59□□□□□ -0.55
CPA4-208ENST00000490117 MYO5CQ9NQX4 1742 aa11.59□□□□□ -0.55
CPA4-208ENST00000490117 ASXL2Q76L83 1435 aa11.59□□□□□ -0.55
CPA4-208ENST00000490117 ITSN2Q9NZM3 1697 aa11.58□□□□□ -0.56
CPA4-208ENST00000490117 CDC42BPBQ9Y5S2 1711 aa11.57□□□□□ -0.56
CPA4-208ENST00000490117 NCOA2Q15596 1464 aa11.57□□□□□ -0.56
CPA4-208ENST00000490117 WDR7Q9Y4E6 1490 aa11.57□□□□□ -0.56
CPA4-208ENST00000490117 TSPOAP1O95153 1857 aa11.57□□□□□ -0.56
CPA4-208ENST00000490117 MAPKBP1O60336 1514 aa11.56□□□□□ -0.56
CPA4-208ENST00000490117 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.55□□□□□ -0.56
CPA4-208ENST00000490117 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
CPA4-208ENST00000490117 PIAS4Q8N2W9 510 aaPredicted RBP11.55□□□□□ -0.56
CPA4-208ENST00000490117 PREX2Q70Z35 1606 aa11.55□□□□□ -0.56
CPA4-208ENST00000490117 DIP2BQ9P265 1576 aa11.54□□□□□ -0.56
CPA4-208ENST00000490117 PLEKHD1A6NEE1 506 aa11.54□□□□□ -0.56
CPA4-208ENST00000490117 PHLDB1Q86UU1 1377 aa11.54□□□□□ -0.56
CPA4-208ENST00000490117 ABCA9Q8IUA7 1624 aa11.53□□□□□ -0.56
CPA4-208ENST00000490117 ABCC10Q5T3U5 1492 aa11.53□□□□□ -0.56
CPA4-208ENST00000490117 POTEDQ86YR6 584 aa11.53□□□□□ -0.56
CPA4-208ENST00000490117 KCNH8Q96L42 1107 aa11.53□□□□□ -0.56
CPA4-208ENST00000490117 CDK11AQ9UQ88 783 aaPredicted RBP11.53□□□□□ -0.56
CPA4-208ENST00000490117 PTPN23Q9H3S7 1636 aa11.51□□□□□ -0.57
CPA4-208ENST00000490117 MAP3K4Q9Y6R4 1608 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms