RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 KIAA0586Q9BVV6 1533 aa26.43■■□□□ 1.82
CLIC4-203ENST00000489758 EHMT2Q96KQ7 1210 aa26.38■■□□□ 1.81
CLIC4-203ENST00000489758 IQGAP2Q13576 1575 aa26.31■■□□□ 1.8
CLIC4-203ENST00000489758 RIMBP3CA6NJZ7 1639 aa26.31■■□□□ 1.8
CLIC4-203ENST00000489758 RIMBP3BA6NNM3 1639 aa26.31■■□□□ 1.8
CLIC4-203ENST00000489758 RIMBP3Q9UFD9 1639 aa26.31■■□□□ 1.8
CLIC4-203ENST00000489758 UBTFP17480 764 aaKnown RBP26.29■■□□□ 1.8
CLIC4-203ENST00000489758 SHROOM2Q13796 1616 aa26.28■■□□□ 1.8
CLIC4-203ENST00000489758 JPH4Q96JJ6 628 aa26.28■■□□□ 1.8
CLIC4-203ENST00000489758 CTTNBP2Q8WZ74 1663 aa26.28■■□□□ 1.8
CLIC4-203ENST00000489758 LOC105371045A0A1W2PR82 267 aa26.26■■□□□ 1.79
CLIC4-203ENST00000489758 ARHGEF11O15085 1522 aa26.23■■□□□ 1.79
CLIC4-203ENST00000489758 UGGT2Q9NYU1 1516 aa26.23■■□□□ 1.79
CLIC4-203ENST00000489758 TNIKQ9UKE5 1360 aa26.21■■□□□ 1.79
CLIC4-203ENST00000489758 PRG4Q92954 1404 aaPredicted RBP26.2■■□□□ 1.78
CLIC4-203ENST00000489758 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
CLIC4-203ENST00000489758 DISP1Q96F81 1524 aa26.14■■□□□ 1.78
CLIC4-203ENST00000489758 CYB5RLQ6IPT4 315 aa26.1■■□□□ 1.77
CLIC4-203ENST00000489758 CARMIL2Q6F5E8 1435 aa26.08■■□□□ 1.77
CLIC4-203ENST00000489758 RANGAP1P46060 587 aaPredicted RBP26.07■■□□□ 1.76
CLIC4-203ENST00000489758 KIAA0556O60303 1618 aa26.06■■□□□ 1.76
CLIC4-203ENST00000489758 SAMD9Q5K651 1589 aa26.06■■□□□ 1.76
CLIC4-203ENST00000489758 EFCAB5A4FU69 1503 aa26.03■■□□□ 1.76
CLIC4-203ENST00000489758 ARHGAP35Q9NRY4 1499 aa26.01■■□□□ 1.75
CLIC4-203ENST00000489758 ARAP1Q96P48 1450 aa26■■□□□ 1.75
CLIC4-203ENST00000489758 CEP162Q5TB80 1403 aa25.99■■□□□ 1.75
CLIC4-203ENST00000489758 CLIP1P30622 1438 aa25.98■■□□□ 1.75
CLIC4-203ENST00000489758 P3H3Q8IVL6 736 aa25.98■■□□□ 1.75
CLIC4-203ENST00000489758 PTPRGP23470 1445 aa25.94■■□□□ 1.74
CLIC4-203ENST00000489758 FHOD3Q2V2M9 1422 aa25.94■■□□□ 1.74
CLIC4-203ENST00000489758 TTBK1Q5TCY1 1321 aaPredicted RBP25.87■■□□□ 1.73
CLIC4-203ENST00000489758 TRHP20396 242 aaPredicted RBP25.86■■□□□ 1.73
CLIC4-203ENST00000489758 PLB1Q6P1J6 1458 aa25.79■■□□□ 1.72
CLIC4-203ENST00000489758 UACAQ9BZF9 1416 aa25.79■■□□□ 1.72
CLIC4-203ENST00000489758 ABCA8O94911 1581 aa25.78■■□□□ 1.72
CLIC4-203ENST00000489758 FMN1Q68DA7 1419 aa25.77■■□□□ 1.72
CLIC4-203ENST00000489758 UHRF1BP1LA0JNW5 1464 aa25.75■■□□□ 1.71
CLIC4-203ENST00000489758 ADCY10Q96PN6 1610 aa25.73■■□□□ 1.71
CLIC4-203ENST00000489758 ABCC2Q92887 1545 aa25.73■■□□□ 1.71
CLIC4-203ENST00000489758 RAPGEF6Q8TEU7 1601 aa25.68■■□□□ 1.7
CLIC4-203ENST00000489758 NUP153P49790 1475 aaKnown RBP25.66■■□□□ 1.7
CLIC4-203ENST00000489758 CASKIN1Q8WXD9 1431 aa25.65■■□□□ 1.7
CLIC4-203ENST00000489758 VPS8Q8N3P4 1428 aa25.64■■□□□ 1.7
CLIC4-203ENST00000489758 PCF11O94913 1555 aaKnown RBP25.64■■□□□ 1.69
CLIC4-203ENST00000489758 KDM5BQ9UGL1 1544 aa25.63■■□□□ 1.69
CLIC4-203ENST00000489758 FYCO1Q9BQS8 1478 aa25.6■■□□□ 1.69
CLIC4-203ENST00000489758 HECW1Q76N89 1606 aa25.58■■□□□ 1.69
CLIC4-203ENST00000489758 ATP10BO94823 1461 aa25.58■■□□□ 1.69
CLIC4-203ENST00000489758 ARID3CA6NKF2 412 aa25.55■■□□□ 1.68
CLIC4-203ENST00000489758 EPRSP07814 1512 aaKnown RBP25.54■■□□□ 1.68
CLIC4-203ENST00000489758 NPM1P06748 294 aaKnown RBP eCLIP25.53■■□□□ 1.68
CLIC4-203ENST00000489758 ATP1B4Q9UN42 357 aaPredicted RBP25.53■■□□□ 1.68
CLIC4-203ENST00000489758 ZCCHC11Q5TAX3 1644 aaKnown RBP25.52■■□□□ 1.68
CLIC4-203ENST00000489758 CDK13Q14004 1512 aaKnown RBP25.5■■□□□ 1.67
CLIC4-203ENST00000489758 MAPKBP1O60336 1514 aa25.47■■□□□ 1.67
CLIC4-203ENST00000489758 CCDC18Q5T9S5 1454 aa25.47■■□□□ 1.67
CLIC4-203ENST00000489758 LRRIQ1Q96JM4 1722 aa25.46■■□□□ 1.67
CLIC4-203ENST00000489758 ASXL2Q76L83 1435 aa25.44■■□□□ 1.66
CLIC4-203ENST00000489758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.42■■□□□ 1.66
CLIC4-203ENST00000489758 HNRNPUL2Q1KMD3 747 aaKnown RBP25.42■■□□□ 1.66
CLIC4-203ENST00000489758 WDR7Q9Y4E6 1490 aa25.39■■□□□ 1.65
CLIC4-203ENST00000489758 MAP3K1Q13233 1512 aa25.37■■□□□ 1.65
CLIC4-203ENST00000489758 MAGI3Q5TCQ9 1506 aa25.35■■□□□ 1.65
CLIC4-203ENST00000489758 TIAM1Q13009 1591 aa25.35■■□□□ 1.65
CLIC4-203ENST00000489758 PLEKHD1A6NEE1 506 aa25.34■■□□□ 1.65
CLIC4-203ENST00000489758 CDK11AQ9UQ88 783 aaPredicted RBP25.33■■□□□ 1.65
CLIC4-203ENST00000489758 CFAP43Q8NDM7 1665 aa25.32■■□□□ 1.64
CLIC4-203ENST00000489758 TROQ12816 1431 aaPredicted RBP25.31■■□□□ 1.64
CLIC4-203ENST00000489758 ABCC10Q5T3U5 1492 aa25.31■■□□□ 1.64
CLIC4-203ENST00000489758 LRRC9Q6ZRR7 1453 aa25.26■■□□□ 1.63
CLIC4-203ENST00000489758 DIP2BQ9P265 1576 aa25.26■■□□□ 1.63
CLIC4-203ENST00000489758 APLP2Q06481 763 aa25.25■■□□□ 1.63
CLIC4-203ENST00000489758 KANK4Q5T7N3 995 aaPredicted RBP25.25■■□□□ 1.63
CLIC4-203ENST00000489758 KCNH8Q96L42 1107 aa25.25■■□□□ 1.63
CLIC4-203ENST00000489758 MTUS2Q5JR59 1369 aa25.24■■□□□ 1.63
CLIC4-203ENST00000489758 GLI2P10070 1586 aa25.22■■□□□ 1.63
CLIC4-203ENST00000489758 EHBP1L1Q8N3D4 1523 aa25.22■■□□□ 1.63
CLIC4-203ENST00000489758 FAM69CQ0P6D2 419 aa25.21■■□□□ 1.63
CLIC4-203ENST00000489758 KIF14Q15058 1648 aa25.19■■□□□ 1.62
CLIC4-203ENST00000489758 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.17■■□□□ 1.626e-6■■■■■ 38.2
CLIC4-203ENST00000489758 ABCA9Q8IUA7 1624 aa25.15■■□□□ 1.62
CLIC4-203ENST00000489758 KIF13AQ9H1H9 1805 aa25.13■■□□□ 1.61
CLIC4-203ENST00000489758 TTC37Q6PGP7 1564 aa25.13■■□□□ 1.61
CLIC4-203ENST00000489758 AEBP2Q6ZN18 517 aaPredicted RBP25.11■■□□□ 1.61
CLIC4-203ENST00000489758 MAP3K4Q9Y6R4 1608 aa25.11■■□□□ 1.61
CLIC4-203ENST00000489758 NCOA2Q15596 1464 aa25.1■■□□□ 1.61
CLIC4-203ENST00000489758 CD109Q6YHK3 1445 aa25.09■■□□□ 1.61
CLIC4-203ENST00000489758 SUPT6HQ7KZ85 1726 aaKnown RBP25.06■■□□□ 1.6
CLIC4-203ENST00000489758 PPARGC1BQ86YN6 1023 aaKnown RBP25.05■■□□□ 1.6
CLIC4-203ENST00000489758 PLCH2O75038 1416 aa25.04■■□□□ 1.6
CLIC4-203ENST00000489758 GPATCH8Q9UKJ3 1502 aaKnown RBP25.03■■□□□ 1.6
CLIC4-203ENST00000489758 CCNB3Q8WWL7 1395 aa25.02■■□□□ 1.6
CLIC4-203ENST00000489758 ARAP3Q8WWN8 1544 aa25■■□□□ 1.59
CLIC4-203ENST00000489758 PPRC1Q5VV67 1664 aaKnown RBP24.99■■□□□ 1.59
CLIC4-203ENST00000489758 PHLDB1Q86UU1 1377 aa24.99■■□□□ 1.59
CLIC4-203ENST00000489758 PREX2Q70Z35 1606 aa24.97■■□□□ 1.59
CLIC4-203ENST00000489758 MYO5CQ9NQX4 1742 aa24.95■■□□□ 1.59
CLIC4-203ENST00000489758 TEX14Q8IWB6 1497 aa24.95■■□□□ 1.58
CLIC4-203ENST00000489758 CDC42BPAQ5VT25 1732 aa24.95■■□□□ 1.58
CLIC4-203ENST00000489758 FANCAO15360 1455 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms