RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
NOD1-208ENST00000489614 ARAP1Q96P48 1450 aa15.35■□□□□ 0.05
NOD1-208ENST00000489614 CHD1O14646 1710 aa15.35■□□□□ 0.05
NOD1-208ENST00000489614 EFCAB5A4FU69 1503 aa15.34■□□□□ 0.05
NOD1-208ENST00000489614 CEP170Q5SW79 1584 aa15.33■□□□□ 0.04
NOD1-208ENST00000489614 ARHGAP35Q9NRY4 1499 aa15.32■□□□□ 0.04
NOD1-208ENST00000489614 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
NOD1-208ENST00000489614 GRIN2AQ12879 1464 aa15.31■□□□□ 0.04
NOD1-208ENST00000489614 IQGAP2Q13576 1575 aa15.29■□□□□ 0.04
NOD1-208ENST00000489614 CLIP1P30622 1438 aa15.28■□□□□ 0.04
NOD1-208ENST00000489614 UGGT2Q9NYU1 1516 aa15.28■□□□□ 0.04
NOD1-208ENST00000489614 NUP160Q12769 1436 aa15.27■□□□□ 0.04
NOD1-208ENST00000489614 LRRIQ1Q96JM4 1722 aa15.27■□□□□ 0.03
NOD1-208ENST00000489614 BCL11AQ9H165 835 aa15.27■□□□□ 0.03
NOD1-208ENST00000489614 TTBK1Q5TCY1 1321 aaPredicted RBP15.27■□□□□ 0.03
NOD1-208ENST00000489614 SHROOM2Q13796 1616 aa15.26■□□□□ 0.03
NOD1-208ENST00000489614 VPS8Q8N3P4 1428 aa15.23■□□□□ 0.03
NOD1-208ENST00000489614 CFAP43Q8NDM7 1665 aa15.23■□□□□ 0.03
NOD1-208ENST00000489614 PRKCSHP14314 528 aaPredicted RBP15.23■□□□□ 0.03
NOD1-208ENST00000489614 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
NOD1-208ENST00000489614 KIAA0586Q9BVV6 1533 aa15.21■□□□□ 0.03
NOD1-208ENST00000489614 KIAA0556O60303 1618 aa15.2■□□□□ 0.02
NOD1-208ENST00000489614 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
NOD1-208ENST00000489614 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
NOD1-208ENST00000489614 MAP3K1Q13233 1512 aa15.18■□□□□ 0.02
NOD1-208ENST00000489614 UBTFP17480 764 aaKnown RBP15.18■□□□□ 0.02
NOD1-208ENST00000489614 ACIN1Q9UKV3 1341 aaKnown RBP15.17■□□□□ 0.02
NOD1-208ENST00000489614 PCF11O94913 1555 aaKnown RBP15.17■□□□□ 0.02
NOD1-208ENST00000489614 DISP1Q96F81 1524 aa15.17■□□□□ 0.02
NOD1-208ENST00000489614 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
NOD1-208ENST00000489614 FYCO1Q9BQS8 1478 aa15.1■□□□□ 0.01
NOD1-208ENST00000489614 TIAM1Q13009 1591 aa15.09■□□□□ 0.01
NOD1-208ENST00000489614 CASKIN1Q8WXD9 1431 aa15.06■□□□□ 0
NOD1-208ENST00000489614 FHOD3Q2V2M9 1422 aa15.04■□□□□ -0
NOD1-208ENST00000489614 HECW1Q76N89 1606 aa15.02■□□□□ -0
NOD1-208ENST00000489614 CENPBP07199 599 aaPredicted RBP15.02■□□□□ -0
NOD1-208ENST00000489614 RAPGEF6Q8TEU7 1601 aa15.02□□□□□ -0.01
NOD1-208ENST00000489614 FMN1Q68DA7 1419 aa15.01□□□□□ -0.01
NOD1-208ENST00000489614 ABCA8O94911 1581 aa15.01□□□□□ -0.01
NOD1-208ENST00000489614 ARHGEF11O15085 1522 aa14.96□□□□□ -0.01
NOD1-208ENST00000489614 ERCC6L2Q5T890 1561 aa14.95□□□□□ -0.02
NOD1-208ENST00000489614 ADCY10Q96PN6 1610 aa14.95□□□□□ -0.02
NOD1-208ENST00000489614 CHMP7Q8WUX9 453 aaPredicted RBP14.94□□□□□ -0.02
NOD1-208ENST00000489614 MAGI3Q5TCQ9 1506 aa14.94□□□□□ -0.02
NOD1-208ENST00000489614 LRRC9Q6ZRR7 1453 aa14.94□□□□□ -0.02
NOD1-208ENST00000489614 CCDC18Q5T9S5 1454 aa14.93□□□□□ -0.02
NOD1-208ENST00000489614 NUP153P49790 1475 aaKnown RBP14.91□□□□□ -0.02
NOD1-208ENST00000489614 EPRSP07814 1512 aaKnown RBP14.89□□□□□ -0.03
NOD1-208ENST00000489614 EHBP1L1Q8N3D4 1523 aa14.89□□□□□ -0.03
NOD1-208ENST00000489614 ZEB1P37275 1124 aaPredicted RBP14.88□□□□□ -0.03
NOD1-208ENST00000489614 SUPT6HQ7KZ85 1726 aaKnown RBP14.87□□□□□ -0.03
NOD1-208ENST00000489614 CARMIL2Q6F5E8 1435 aa14.86□□□□□ -0.03
NOD1-208ENST00000489614 PRG4Q92954 1404 aaPredicted RBP14.86□□□□□ -0.03
NOD1-208ENST00000489614 JPH4Q96JJ6 628 aa14.85□□□□□ -0.03
NOD1-208ENST00000489614 RRBP1Q9P2E9 1410 aaKnown RBP14.85□□□□□ -0.03
NOD1-208ENST00000489614 TRIM26Q12899 539 aaPredicted RBP14.83□□□□□ -0.04
NOD1-208ENST00000489614 UHRF1BP1LA0JNW5 1464 aa14.83□□□□□ -0.04
NOD1-208ENST00000489614 CDK13Q14004 1512 aaKnown RBP14.83□□□□□ -0.04
NOD1-208ENST00000489614 PLB1Q6P1J6 1458 aa14.82□□□□□ -0.04
NOD1-208ENST00000489614 KANK4Q5T7N3 995 aaPredicted RBP14.81□□□□□ -0.04
NOD1-208ENST00000489614 ABCC2Q92887 1545 aa14.81□□□□□ -0.04
NOD1-208ENST00000489614 RANGAP1P46060 587 aaPredicted RBP14.8□□□□□ -0.04
NOD1-208ENST00000489614 ZCCHC11Q5TAX3 1644 aaKnown RBP14.78□□□□□ -0.04
NOD1-208ENST00000489614 P3H3Q8IVL6 736 aa14.78□□□□□ -0.04
NOD1-208ENST00000489614 FBLN2P98095 1184 aa14.76□□□□□ -0.05
NOD1-208ENST00000489614 CDC42BPAQ5VT25 1732 aa14.76□□□□□ -0.05
NOD1-208ENST00000489614 KIF14Q15058 1648 aa14.75□□□□□ -0.05
NOD1-208ENST00000489614 ITSN2Q9NZM3 1697 aa14.74□□□□□ -0.05
NOD1-208ENST00000489614 ATP10BO94823 1461 aa14.74□□□□□ -0.05
NOD1-208ENST00000489614 KDM5BQ9UGL1 1544 aa14.73□□□□□ -0.05
NOD1-208ENST00000489614 TCOF1Q13428 1488 aaKnown RBP14.73□□□□□ -0.05
NOD1-208ENST00000489614 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.73□□□□□ -0.05
NOD1-208ENST00000489614 NCOA2Q15596 1464 aa14.72□□□□□ -0.05
NOD1-208ENST00000489614 PHLDB1Q86UU1 1377 aa14.72□□□□□ -0.05
NOD1-208ENST00000489614 UACAQ9BZF9 1416 aa14.72□□□□□ -0.05
NOD1-208ENST00000489614 ERICH6Q7L0X2 663 aa14.71□□□□□ -0.06
NOD1-208ENST00000489614 ANP32EQ9BTT0 268 aa14.71□□□□□ -0.06
NOD1-208ENST00000489614 ABCC10Q5T3U5 1492 aa14.7□□□□□ -0.06
NOD1-208ENST00000489614 PTPRGP23470 1445 aa14.7□□□□□ -0.06
NOD1-208ENST00000489614 CROCC2H7BZ55 1655 aa14.7□□□□□ -0.06
NOD1-208ENST00000489614 PTPN23Q9H3S7 1636 aa14.7□□□□□ -0.06
NOD1-208ENST00000489614 CDC42BPBQ9Y5S2 1711 aa14.69□□□□□ -0.06
NOD1-208ENST00000489614 PREX2Q70Z35 1606 aa14.68□□□□□ -0.06
NOD1-208ENST00000489614 TROQ12816 1431 aaPredicted RBP14.68□□□□□ -0.06
NOD1-208ENST00000489614 RIMBP3CA6NJZ7 1639 aa14.67□□□□□ -0.06
NOD1-208ENST00000489614 RIMBP3BA6NNM3 1639 aa14.67□□□□□ -0.06
NOD1-208ENST00000489614 RIMBP3Q9UFD9 1639 aa14.67□□□□□ -0.06
NOD1-208ENST00000489614 MYOM3Q5VTT5 1437 aa14.65□□□□□ -0.06
NOD1-208ENST00000489614 YTHDC1Q96MU7 727 aaKnown RBP14.65□□□□□ -0.06
NOD1-208ENST00000489614 FGD6Q6ZV73 1430 aa14.64□□□□□ -0.07
NOD1-208ENST00000489614 MYO5CQ9NQX4 1742 aa14.63□□□□□ -0.07
NOD1-208ENST00000489614 TTC37Q6PGP7 1564 aa14.63□□□□□ -0.07
NOD1-208ENST00000489614 GCC2Q8IWJ2 1684 aa14.63□□□□□ -0.07
NOD1-208ENST00000489614 MIA2Q96PC5 1412 aa14.62□□□□□ -0.07
NOD1-208ENST00000489614 CCNB3Q8WWL7 1395 aa14.62□□□□□ -0.07
NOD1-208ENST00000489614 DNMT1P26358 1616 aaKnown RBP14.62□□□□□ -0.07
NOD1-208ENST00000489614 APLP2Q06481 763 aa14.62□□□□□ -0.07
NOD1-208ENST00000489614 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
NOD1-208ENST00000489614 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.6□□□□□ -0.07
NOD1-208ENST00000489614 MTUS2Q5JR59 1369 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms