RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 EFCAB5A4FU69 1503 aa13.24□□□□□ -0.29
CSMD2-209ENST00000489419 ABCA5Q8WWZ7 1642 aa13.24□□□□□ -0.29
CSMD2-209ENST00000489419 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
CSMD2-209ENST00000489419 BCL11AQ9H165 835 aa13.24□□□□□ -0.29
CSMD2-209ENST00000489419 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
CSMD2-209ENST00000489419 GAPVD1Q14C86 1478 aa13.22□□□□□ -0.29
CSMD2-209ENST00000489419 KIF21AQ7Z4S6 1674 aa13.22□□□□□ -0.29
CSMD2-209ENST00000489419 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
CSMD2-209ENST00000489419 AQRO60306 1485 aaKnown RBP eCLIP13.19□□□□□ -0.3
CSMD2-209ENST00000489419 CTTNBP2Q8WZ74 1663 aa13.19□□□□□ -0.3
CSMD2-209ENST00000489419 CLSPNQ9HAW4 1339 aa13.18□□□□□ -0.3
CSMD2-209ENST00000489419 TARBP1Q13395 1621 aaKnown RBP13.18□□□□□ -0.3
CSMD2-209ENST00000489419 TDRD9Q8NDG6 1382 aaKnown RBP13.18□□□□□ -0.3
CSMD2-209ENST00000489419 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
CSMD2-209ENST00000489419 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
CSMD2-209ENST00000489419 LRRC9Q6ZRR7 1453 aa13.16□□□□□ -0.3
CSMD2-209ENST00000489419 FYCO1Q9BQS8 1478 aa13.15□□□□□ -0.3
CSMD2-209ENST00000489419 CASKIN1Q8WXD9 1431 aa13.15□□□□□ -0.3
CSMD2-209ENST00000489419 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
CSMD2-209ENST00000489419 FMN1Q68DA7 1419 aa13.14□□□□□ -0.31
CSMD2-209ENST00000489419 CFAP43Q8NDM7 1665 aa13.14□□□□□ -0.31
CSMD2-209ENST00000489419 PCF11O94913 1555 aaKnown RBP13.12□□□□□ -0.31
CSMD2-209ENST00000489419 FHOD3Q2V2M9 1422 aa13.11□□□□□ -0.31
CSMD2-209ENST00000489419 SAMD9Q5K651 1589 aa13.11□□□□□ -0.31
CSMD2-209ENST00000489419 P3H3Q8IVL6 736 aa13.08□□□□□ -0.32
CSMD2-209ENST00000489419 IFT140Q96RY7 1462 aa13.08□□□□□ -0.32
CSMD2-209ENST00000489419 WDR62O43379 1518 aa13.07□□□□□ -0.32
CSMD2-209ENST00000489419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.07□□□□□ -0.32
CSMD2-209ENST00000489419 PBRM1Q86U86 1689 aa13.07□□□□□ -0.32
CSMD2-209ENST00000489419 GRIN2BQ13224 1484 aa13.07□□□□□ -0.32
CSMD2-209ENST00000489419 DHX57Q6P158 1386 aaKnown RBP13.07□□□□□ -0.32
CSMD2-209ENST00000489419 SNAPC4Q5SXM2 1469 aa13.05□□□□□ -0.32
CSMD2-209ENST00000489419 ZNF316A6NFI3 1004 aaPredicted RBP13.05□□□□□ -0.32
CSMD2-209ENST00000489419 THOC2Q8NI27 1593 aaKnown RBP13.05□□□□□ -0.32
CSMD2-209ENST00000489419 PHLDB1Q86UU1 1377 aa13.04□□□□□ -0.32
CSMD2-209ENST00000489419 ADAMTS12P58397 1594 aa13.04□□□□□ -0.32
CSMD2-209ENST00000489419 DIEXFQ68CQ4 756 aaKnown RBP13.02□□□□□ -0.33
CSMD2-209ENST00000489419 ATP1B4Q9UN42 357 aaPredicted RBP13.01□□□□□ -0.33
CSMD2-209ENST00000489419 IQGAP2Q13576 1575 aa12.99□□□□□ -0.33
CSMD2-209ENST00000489419 SETD5Q9C0A6 1442 aa12.98□□□□□ -0.33
CSMD2-209ENST00000489419 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
CSMD2-209ENST00000489419 MTUS2Q5JR59 1369 aa12.96□□□□□ -0.33
CSMD2-209ENST00000489419 RAB3GAP2Q9H2M9 1393 aa12.96□□□□□ -0.33
CSMD2-209ENST00000489419 UGGT2Q9NYU1 1516 aa12.96□□□□□ -0.33
CSMD2-209ENST00000489419 ZNF608Q9ULD9 1512 aaPredicted RBP12.95□□□□□ -0.34
CSMD2-209ENST00000489419 DAXXQ9UER7 740 aaPredicted RBP12.94□□□□□ -0.34
CSMD2-209ENST00000489419 ERCC6Q03468 1493 aa12.94□□□□□ -0.34
CSMD2-209ENST00000489419 FGD6Q6ZV73 1430 aa12.94□□□□□ -0.34
CSMD2-209ENST00000489419 KIAA0586Q9BVV6 1533 aa12.94□□□□□ -0.34
CSMD2-209ENST00000489419 ITGAEP38570 1179 aa12.94□□□□□ -0.34
CSMD2-209ENST00000489419 FAM50AQ14320 339 aaKnown RBP12.94□□□□□ -0.34
CSMD2-209ENST00000489419 EHBP1L1Q8N3D4 1523 aa12.94□□□□□ -0.34
CSMD2-209ENST00000489419 HECW1Q76N89 1606 aa12.92□□□□□ -0.34
CSMD2-209ENST00000489419 LRRIQ1Q96JM4 1722 aa12.91□□□□□ -0.34
CSMD2-209ENST00000489419 MAGI1Q96QZ7 1491 aaPredicted RBP12.91□□□□□ -0.34
CSMD2-209ENST00000489419 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
CSMD2-209ENST00000489419 MYOM3Q5VTT5 1437 aa12.9□□□□□ -0.34
CSMD2-209ENST00000489419 NCOA2Q15596 1464 aa12.9□□□□□ -0.34
CSMD2-209ENST00000489419 PHF23Q9BUL5 403 aaPredicted RBP12.9□□□□□ -0.34
CSMD2-209ENST00000489419 EIF4G3O43432 1585 aaKnown RBP12.9□□□□□ -0.34
CSMD2-209ENST00000489419 ARHGEF11O15085 1522 aa12.9□□□□□ -0.34
CSMD2-209ENST00000489419 GRIN2AQ12879 1464 aa12.89□□□□□ -0.35
CSMD2-209ENST00000489419 EPRSP07814 1512 aaKnown RBP12.87□□□□□ -0.35
CSMD2-209ENST00000489419 TIMELESSQ9UNS1 1208 aa12.87□□□□□ -0.35
CSMD2-209ENST00000489419 MAPKBP1O60336 1514 aa12.86□□□□□ -0.35
CSMD2-209ENST00000489419 SYNJ2O15056 1496 aa12.85□□□□□ -0.35
CSMD2-209ENST00000489419 KIAA0556O60303 1618 aa12.85□□□□□ -0.35
CSMD2-209ENST00000489419 DISP1Q96F81 1524 aa12.84□□□□□ -0.35
CSMD2-209ENST00000489419 HFM1A2PYH4 1435 aa12.84□□□□□ -0.35
CSMD2-209ENST00000489419 TCOF1Q13428 1488 aaKnown RBP12.83□□□□□ -0.35
CSMD2-209ENST00000489419 MAGI3Q5TCQ9 1506 aa12.83□□□□□ -0.36
CSMD2-209ENST00000489419 MIA2Q96PC5 1412 aa12.83□□□□□ -0.36
CSMD2-209ENST00000489419 PTPN23Q9H3S7 1636 aa12.82□□□□□ -0.36
CSMD2-209ENST00000489419 CHMP7Q8WUX9 453 aaPredicted RBP12.81□□□□□ -0.36
CSMD2-209ENST00000489419 NUP160Q12769 1436 aa12.8□□□□□ -0.36
CSMD2-209ENST00000489419 PTPRKQ15262 1439 aa12.79□□□□□ -0.36
CSMD2-209ENST00000489419 ACIN1Q9UKV3 1341 aaKnown RBP12.79□□□□□ -0.36
CSMD2-209ENST00000489419 CENPBP07199 599 aaPredicted RBP12.79□□□□□ -0.36
CSMD2-209ENST00000489419 ILDR1Q86SU0 546 aaPredicted RBP12.79□□□□□ -0.36
CSMD2-209ENST00000489419 CDK11AQ9UQ88 783 aaPredicted RBP12.79□□□□□ -0.36
CSMD2-209ENST00000489419 AKNAQ7Z591 1439 aa12.79□□□□□ -0.36
CSMD2-209ENST00000489419 NAIPQ13075 1403 aa12.78□□□□□ -0.36
CSMD2-209ENST00000489419 UACAQ9BZF9 1416 aa12.78□□□□□ -0.36
CSMD2-209ENST00000489419 CEP170Q5SW79 1584 aa12.77□□□□□ -0.36
CSMD2-209ENST00000489419 RAPGEF6Q8TEU7 1601 aa12.77□□□□□ -0.36
CSMD2-209ENST00000489419 CDK13Q14004 1512 aaKnown RBP12.77□□□□□ -0.37
CSMD2-209ENST00000489419 CARMIL2Q6F5E8 1435 aa12.77□□□□□ -0.37
CSMD2-209ENST00000489419 NUP153P49790 1475 aaKnown RBP12.76□□□□□ -0.37
CSMD2-209ENST00000489419 JPH4Q96JJ6 628 aa12.74□□□□□ -0.37
CSMD2-209ENST00000489419 MIER1Q8N108 512 aa12.73□□□□□ -0.37
CSMD2-209ENST00000489419 SIN3AQ96ST3 1273 aa12.71□□□□□ -0.38
CSMD2-209ENST00000489419 GCC2Q8IWJ2 1684 aa12.71□□□□□ -0.38
CSMD2-209ENST00000489419 TROQ12816 1431 aaPredicted RBP12.7□□□□□ -0.38
CSMD2-209ENST00000489419 ROCK1Q13464 1354 aa12.7□□□□□ -0.38
CSMD2-209ENST00000489419 PPP1R15AO75807 674 aaPredicted RBP12.69□□□□□ -0.38
CSMD2-209ENST00000489419 FBLN2P98095 1184 aa12.69□□□□□ -0.38
CSMD2-209ENST00000489419 NEUROD1Q13562 356 aa12.68□□□□□ -0.38
CSMD2-209ENST00000489419 ADCY10Q96PN6 1610 aa12.66□□□□□ -0.38
CSMD2-209ENST00000489419 PLB1Q6P1J6 1458 aa12.66□□□□□ -0.38
CSMD2-209ENST00000489419 DAPK1P53355 1430 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms