RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
EXOSC3-206ENST00000489414 TOP2BQ02880 1626 aa15.53■□□□□ 0.08
EXOSC3-206ENST00000489414 GRIN2BQ13224 1484 aa15.5■□□□□ 0.07
EXOSC3-206ENST00000489414 CERKQ8TCT0 537 aa15.49■□□□□ 0.07
EXOSC3-206ENST00000489414 SHROOM2Q13796 1616 aa15.48■□□□□ 0.07
EXOSC3-206ENST00000489414 SOGA1O94964 1423 aa15.43■□□□□ 0.06
EXOSC3-206ENST00000489414 PIAS4Q8N2W9 510 aaPredicted RBP15.43■□□□□ 0.06
EXOSC3-206ENST00000489414 PPRC1Q5VV67 1664 aaKnown RBP15.43■□□□□ 0.06
EXOSC3-206ENST00000489414 COL17A1Q9UMD9 1497 aaPredicted RBP15.4■□□□□ 0.06
EXOSC3-206ENST00000489414 NPM1P06748 294 aaKnown RBP eCLIP15.39■□□□□ 0.05
EXOSC3-206ENST00000489414 PBRM1Q86U86 1689 aa15.37■□□□□ 0.05
EXOSC3-206ENST00000489414 PCF11O94913 1555 aaKnown RBP15.36■□□□□ 0.05
EXOSC3-206ENST00000489414 ADCY10Q96PN6 1610 aa15.35■□□□□ 0.05
EXOSC3-206ENST00000489414 NUP160Q12769 1436 aa15.35■□□□□ 0.05
EXOSC3-206ENST00000489414 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.05
EXOSC3-206ENST00000489414 GRIN2AQ12879 1464 aa15.32■□□□□ 0.04
EXOSC3-206ENST00000489414 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
EXOSC3-206ENST00000489414 PRG4Q92954 1404 aaPredicted RBP15.26■□□□□ 0.03
EXOSC3-206ENST00000489414 PPP6R1Q9UPN7 881 aa15.26■□□□□ 0.03
EXOSC3-206ENST00000489414 PTPRMP28827 1452 aa15.26■□□□□ 0.03
EXOSC3-206ENST00000489414 FGD5Q6ZNL6 1462 aa15.26■□□□□ 0.03
EXOSC3-206ENST00000489414 GLI2P10070 1586 aa15.24■□□□□ 0.03
EXOSC3-206ENST00000489414 ADRA2BP18089 450 aa15.2■□□□□ 0.02
EXOSC3-206ENST00000489414 KIF21BO75037 1637 aa15.17■□□□□ 0.02
EXOSC3-206ENST00000489414 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
EXOSC3-206ENST00000489414 ADAMTSL3P82987 1691 aa15.16■□□□□ 0.02
EXOSC3-206ENST00000489414 CCDC88BA6NC98 1476 aa15.15■□□□□ 0.02
EXOSC3-206ENST00000489414 ADAMTS12P58397 1594 aa15.15■□□□□ 0.02
EXOSC3-206ENST00000489414 TEX14Q8IWB6 1497 aa15.13■□□□□ 0.01
EXOSC3-206ENST00000489414 MAP3K4Q9Y6R4 1608 aa15.12■□□□□ 0.01
EXOSC3-206ENST00000489414 HSPA2P54652 639 aa15.11■□□□□ 0.01
EXOSC3-206ENST00000489414 JPH4Q96JJ6 628 aa15.1■□□□□ 0.01
EXOSC3-206ENST00000489414 ASXL2Q76L83 1435 aa15.07■□□□□ 0
EXOSC3-206ENST00000489414 PLB1Q6P1J6 1458 aa15.07■□□□□ 0
EXOSC3-206ENST00000489414 CUX1P39880 1505 aa15.03■□□□□ -0
EXOSC3-206ENST00000489414 ABCA10Q8WWZ4 1543 aa15.02■□□□□ -0
EXOSC3-206ENST00000489414 MED1Q15648 1581 aaPredicted RBP15.01□□□□□ -0.01
EXOSC3-206ENST00000489414 KIAA0586Q9BVV6 1533 aa15.01□□□□□ -0.01
EXOSC3-206ENST00000489414 FHAD1B1AJZ9 1412 aa15□□□□□ -0.01
EXOSC3-206ENST00000489414 MADDQ8WXG6 1647 aa14.99□□□□□ -0.01
EXOSC3-206ENST00000489414 ABCC2Q92887 1545 aa14.99□□□□□ -0.01
EXOSC3-206ENST00000489414 EPRSP07814 1512 aaKnown RBP14.98□□□□□ -0.01
EXOSC3-206ENST00000489414 RUSC2Q8N2Y8 1516 aa14.98□□□□□ -0.01
EXOSC3-206ENST00000489414 BCORL1Q5H9F3 1711 aa14.96□□□□□ -0.01
EXOSC3-206ENST00000489414 IQSEC2Q5JU85 1478 aa14.95□□□□□ -0.02
EXOSC3-206ENST00000489414 CUL7Q14999 1698 aa14.92□□□□□ -0.02
EXOSC3-206ENST00000489414 RIMS1Q86UR5 1692 aaKnown RBP14.89□□□□□ -0.03
EXOSC3-206ENST00000489414 STRCQ7RTU9 1775 aa14.87□□□□□ -0.03
EXOSC3-206ENST00000489414 LTBP4Q8N2S1 1624 aa14.87□□□□□ -0.03
EXOSC3-206ENST00000489414 YEATS2Q9ULM3 1422 aa14.85□□□□□ -0.03
EXOSC3-206ENST00000489414 SRCAPQ6ZRS2 3230 aa14.85□□□□□ -0.03
EXOSC3-206ENST00000489414 DMRT2Q9Y5R5 561 aa14.84□□□□□ -0.03
EXOSC3-206ENST00000489414 MAGI3Q5TCQ9 1506 aa14.83□□□□□ -0.04
EXOSC3-206ENST00000489414 PTPRGP23470 1445 aa14.81□□□□□ -0.04
EXOSC3-206ENST00000489414 UHRF1BP1LA0JNW5 1464 aa14.8□□□□□ -0.04
EXOSC3-206ENST00000489414 ERICH3Q5RHP9 1530 aa14.8□□□□□ -0.04
EXOSC3-206ENST00000489414 ARAP3Q8WWN8 1544 aa14.76□□□□□ -0.05
EXOSC3-206ENST00000489414 CFAP43Q8NDM7 1665 aa14.76□□□□□ -0.05
EXOSC3-206ENST00000489414 KDM5BQ9UGL1 1544 aa14.75□□□□□ -0.05
EXOSC3-206ENST00000489414 PTPRTO14522 1441 aa14.75□□□□□ -0.05
EXOSC3-206ENST00000489414 PREX1Q8TCU6 1659 aa14.73□□□□□ -0.05
EXOSC3-206ENST00000489414 CD109Q6YHK3 1445 aa14.73□□□□□ -0.05
EXOSC3-206ENST00000489414 UBAP1LF5GYI3 381 aa14.71□□□□□ -0.05
EXOSC3-206ENST00000489414 ZCCHC11Q5TAX3 1644 aaKnown RBP14.7□□□□□ -0.06
EXOSC3-206ENST00000489414 ARID4BQ4LE39 1312 aaPredicted RBP14.7□□□□□ -0.06
EXOSC3-206ENST00000489414 WDR7Q9Y4E6 1490 aa14.69□□□□□ -0.06
EXOSC3-206ENST00000489414 HSPA1LP34931 641 aa14.68□□□□□ -0.06
EXOSC3-206ENST00000489414 UACAQ9BZF9 1416 aa14.67□□□□□ -0.06
EXOSC3-206ENST00000489414 TNIKQ9UKE5 1360 aa14.67□□□□□ -0.06
EXOSC3-206ENST00000489414 TTBK1Q5TCY1 1321 aaPredicted RBP14.66□□□□□ -0.06
EXOSC3-206ENST00000489414 TTC37Q6PGP7 1564 aa14.64□□□□□ -0.07
EXOSC3-206ENST00000489414 WRNQ14191 1432 aaPredicted RBP eCLIP14.62□□□□□ -0.07
EXOSC3-206ENST00000489414 FER1L4A9Z1Z3 1794 aa14.57□□□□□ -0.08
EXOSC3-206ENST00000489414 ARHGEF40Q8TER5 1519 aa14.57□□□□□ -0.08
EXOSC3-206ENST00000489414 FRMPD1Q5SYB0 1578 aa14.57□□□□□ -0.08
EXOSC3-206ENST00000489414 RGS17Q9UGC6 210 aaPredicted RBP14.57□□□□□ -0.08
EXOSC3-206ENST00000489414 RAPGEF3O95398 923 aa14.55□□□□□ -0.08
EXOSC3-206ENST00000489414 CARMIL2Q6F5E8 1435 aa14.55□□□□□ -0.08
EXOSC3-206ENST00000489414 POGZQ7Z3K3 1410 aa14.53□□□□□ -0.08
EXOSC3-206ENST00000489414 PHLDB1Q86UU1 1377 aa14.53□□□□□ -0.08
EXOSC3-206ENST00000489414 SIGLEC1Q9BZZ2 1709 aa14.52□□□□□ -0.08
EXOSC3-206ENST00000489414 UHRF1BP1Q6BDS2 1440 aa14.52□□□□□ -0.08
EXOSC3-206ENST00000489414 FANCAO15360 1455 aa14.51□□□□□ -0.09
EXOSC3-206ENST00000489414 SETD1BQ9UPS6 1966 aaKnown RBP14.49□□□□□ -0.09
EXOSC3-206ENST00000489414 SETD1AO15047 1707 aaKnown RBP14.48□□□□□ -0.09
EXOSC3-206ENST00000489414 ZNF335Q9H4Z2 1342 aaPredicted RBP14.46□□□□□ -0.09
EXOSC3-206ENST00000489414 SCAF1Q9H7N4 1312 aaKnown RBP14.46□□□□□ -0.09
EXOSC3-206ENST00000489414 KCNH8Q96L42 1107 aa14.46□□□□□ -0.09
EXOSC3-206ENST00000489414 NCOA1Q15788 1441 aa14.46□□□□□ -0.09
EXOSC3-206ENST00000489414 PIP4K2BP78356 416 aa14.45□□□□□ -0.1
EXOSC3-206ENST00000489414 DISP1Q96F81 1524 aa14.41□□□□□ -0.1
EXOSC3-206ENST00000489414 ARHGEF12Q9NZN5 1544 aa14.41□□□□□ -0.1
EXOSC3-206ENST00000489414 CEBPAP49715 358 aaPredicted RBP14.41□□□□□ -0.1
EXOSC3-206ENST00000489414 NEO1Q92859 1461 aa14.41□□□□□ -0.1
EXOSC3-206ENST00000489414 BIVM-ERCC5R4GMW8 1640 aa14.41□□□□□ -0.1
EXOSC3-206ENST00000489414 POTEAQ6S8J7 498 aa14.4□□□□□ -0.1
EXOSC3-206ENST00000489414 AKNAQ7Z591 1439 aa14.39□□□□□ -0.11
EXOSC3-206ENST00000489414 KIAA0556O60303 1618 aa14.38□□□□□ -0.11
EXOSC3-206ENST00000489414 TOM1O60784 492 aa14.37□□□□□ -0.11
EXOSC3-206ENST00000489414 MLECQ14165 292 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms