RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 CTTNBP2Q8WZ74 1663 aa29.11■■■□□ 2.25
SYNGR1-207ENST00000489206 CCNB3Q8WWL7 1395 aa29.09■■■□□ 2.25
SYNGR1-207ENST00000489206 EFCAB5A4FU69 1503 aa29.09■■■□□ 2.25
SYNGR1-207ENST00000489206 DHX57Q6P158 1386 aaKnown RBP29.05■■■□□ 2.24
SYNGR1-207ENST00000489206 PDS5BQ9NTI5 1447 aa29.03■■■□□ 2.24
SYNGR1-207ENST00000489206 URB2Q14146 1524 aaKnown RBP29.02■■■□□ 2.24
SYNGR1-207ENST00000489206 LRRC9Q6ZRR7 1453 aa29.01■■■□□ 2.23
SYNGR1-207ENST00000489206 PCF11O94913 1555 aaKnown RBP29■■■□□ 2.23
SYNGR1-207ENST00000489206 ABCA5Q8WWZ7 1642 aa28.99■■■□□ 2.23
SYNGR1-207ENST00000489206 THOC2Q8NI27 1593 aaKnown RBP28.96■■■□□ 2.23
SYNGR1-207ENST00000489206 AQRO60306 1485 aaKnown RBP eCLIP28.96■■■□□ 2.231e-7■■■■■ 32.4
SYNGR1-207ENST00000489206 FYCO1Q9BQS8 1478 aa28.95■■■□□ 2.22
SYNGR1-207ENST00000489206 SCAF1Q9H7N4 1312 aaKnown RBP28.89■■■□□ 2.21
SYNGR1-207ENST00000489206 CASKIN1Q8WXD9 1431 aa28.87■■■□□ 2.21
SYNGR1-207ENST00000489206 ACIN1Q9UKV3 1341 aaKnown RBP28.86■■■□□ 2.21
SYNGR1-207ENST00000489206 CENPBP07199 599 aaPredicted RBP28.84■■■□□ 2.21
SYNGR1-207ENST00000489206 FHOD3Q2V2M9 1422 aa28.84■■■□□ 2.21
SYNGR1-207ENST00000489206 GAPVD1Q14C86 1478 aa28.82■■■□□ 2.2
SYNGR1-207ENST00000489206 SAMD9Q5K651 1589 aa28.81■■■□□ 2.2
SYNGR1-207ENST00000489206 FMN1Q68DA7 1419 aa28.81■■■□□ 2.2
SYNGR1-207ENST00000489206 MRC2Q9UBG0 1479 aa28.79■■■□□ 2.2
SYNGR1-207ENST00000489206 PHLDB1Q86UU1 1377 aa28.78■■■□□ 2.2
SYNGR1-207ENST00000489206 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.19
SYNGR1-207ENST00000489206 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.72■■■□□ 2.19
SYNGR1-207ENST00000489206 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
SYNGR1-207ENST00000489206 RAB3GAP2Q9H2M9 1393 aa28.72■■■□□ 2.19
SYNGR1-207ENST00000489206 P3H3Q8IVL6 736 aa28.71■■■□□ 2.19
SYNGR1-207ENST00000489206 WDR62O43379 1518 aa28.71■■■□□ 2.19
SYNGR1-207ENST00000489206 NEUROD1Q13562 356 aa28.71■■■□□ 2.19
SYNGR1-207ENST00000489206 SETD5Q9C0A6 1442 aa28.71■■■□□ 2.19
SYNGR1-207ENST00000489206 TDRD9Q8NDG6 1382 aaKnown RBP28.7■■■□□ 2.19
SYNGR1-207ENST00000489206 PBRM1Q86U86 1689 aa28.67■■■□□ 2.18
SYNGR1-207ENST00000489206 ITGAEP38570 1179 aa28.65■■■□□ 2.18
SYNGR1-207ENST00000489206 MAPKBP1O60336 1514 aa28.63■■■□□ 2.17
SYNGR1-207ENST00000489206 LRRIQ1Q96JM4 1722 aa28.61■■■□□ 2.17
SYNGR1-207ENST00000489206 ATP1B4Q9UN42 357 aaPredicted RBP28.58■■■□□ 2.17
SYNGR1-207ENST00000489206 GRIN2BQ13224 1484 aa28.58■■■□□ 2.17
SYNGR1-207ENST00000489206 MIER1Q8N108 512 aa28.57■■■□□ 2.16
SYNGR1-207ENST00000489206 FAM50AQ14320 339 aaKnown RBP28.55■■■□□ 2.16
SYNGR1-207ENST00000489206 FGD6Q6ZV73 1430 aa28.53■■■□□ 2.16
SYNGR1-207ENST00000489206 ADAMTS12P58397 1594 aa28.52■■■□□ 2.16
SYNGR1-207ENST00000489206 SUPT6HQ7KZ85 1726 aaKnown RBP28.51■■■□□ 2.15
SYNGR1-207ENST00000489206 EHBP1L1Q8N3D4 1523 aa28.5■■■□□ 2.15
SYNGR1-207ENST00000489206 MTUS2Q5JR59 1369 aa28.49■■■□□ 2.15
SYNGR1-207ENST00000489206 IQGAP2Q13576 1575 aa28.46■■■□□ 2.15
SYNGR1-207ENST00000489206 CCDC18Q5T9S5 1454 aa28.46■■■□□ 2.15
SYNGR1-207ENST00000489206 HECW1Q76N89 1606 aa28.43■■■□□ 2.14
SYNGR1-207ENST00000489206 NCOA2Q15596 1464 aa28.41■■■□□ 2.14
SYNGR1-207ENST00000489206 MYOM3Q5VTT5 1437 aa28.4■■■□□ 2.14
SYNGR1-207ENST00000489206 GTF3C3Q9Y5Q9 886 aa28.39■■■□□ 2.14
SYNGR1-207ENST00000489206 ARHGEF11O15085 1522 aa28.38■■■□□ 2.13
SYNGR1-207ENST00000489206 TIMELESSQ9UNS1 1208 aa28.38■■■□□ 2.13
SYNGR1-207ENST00000489206 IFT140Q96RY7 1462 aa28.37■■■□□ 2.13
SYNGR1-207ENST00000489206 UGGT2Q9NYU1 1516 aa28.37■■■□□ 2.13
SYNGR1-207ENST00000489206 HFM1A2PYH4 1435 aa28.33■■■□□ 2.13
SYNGR1-207ENST00000489206 PTPN23Q9H3S7 1636 aa28.32■■■□□ 2.12
SYNGR1-207ENST00000489206 PELP1Q8IZL8 1130 aaKnown RBP28.31■■■□□ 2.12
SYNGR1-207ENST00000489206 YTHDC1Q96MU7 727 aaKnown RBP28.3■■■□□ 2.12
SYNGR1-207ENST00000489206 MAGI3Q5TCQ9 1506 aa28.28■■■□□ 2.12
SYNGR1-207ENST00000489206 ZNF608Q9ULD9 1512 aaPredicted RBP28.28■■■□□ 2.12
SYNGR1-207ENST00000489206 TCOF1Q13428 1488 aaKnown RBP28.25■■■□□ 2.11
SYNGR1-207ENST00000489206 EPRSP07814 1512 aaKnown RBP28.24■■■□□ 2.11
SYNGR1-207ENST00000489206 UACAQ9BZF9 1416 aa28.23■■■□□ 2.11
SYNGR1-207ENST00000489206 PTPRKQ15262 1439 aa28.23■■■□□ 2.11
SYNGR1-207ENST00000489206 GCC2Q8IWJ2 1684 aa28.2■■■□□ 2.1
SYNGR1-207ENST00000489206 NAIPQ13075 1403 aa28.19■■■□□ 2.1
SYNGR1-207ENST00000489206 KIAA0586Q9BVV6 1533 aa28.18■■■□□ 2.1
SYNGR1-207ENST00000489206 SIN3AQ96ST3 1273 aa28.17■■■□□ 2.1
SYNGR1-207ENST00000489206 EIF4G3O43432 1585 aaKnown RBP28.16■■■□□ 2.1
SYNGR1-207ENST00000489206 KIAA0556O60303 1618 aa28.16■■■□□ 2.1
SYNGR1-207ENST00000489206 AKNAQ7Z591 1439 aa28.15■■■□□ 2.1
SYNGR1-207ENST00000489206 MIA2Q96PC5 1412 aa28.14■■■□□ 2.1
SYNGR1-207ENST00000489206 CDK13Q14004 1512 aaKnown RBP28.1■■■□□ 2.09
SYNGR1-207ENST00000489206 GRIN2AQ12879 1464 aa28.1■■■□□ 2.09
SYNGR1-207ENST00000489206 DISP1Q96F81 1524 aa28.08■■■□□ 2.09
SYNGR1-207ENST00000489206 PPP1R15AO75807 674 aaPredicted RBP28.07■■■□□ 2.08
SYNGR1-207ENST00000489206 MAGI1Q96QZ7 1491 aaPredicted RBP28.05■■■□□ 2.08
SYNGR1-207ENST00000489206 RAPGEF6Q8TEU7 1601 aa28.05■■■□□ 2.08
SYNGR1-207ENST00000489206 TONSLQ96HA7 1378 aa28.02■■■□□ 2.08
SYNGR1-207ENST00000489206 NUP153P49790 1475 aaKnown RBP27.96■■■□□ 2.07
SYNGR1-207ENST00000489206 SYNJ2O15056 1496 aa27.94■■■□□ 2.06
SYNGR1-207ENST00000489206 DNMT1P26358 1616 aaKnown RBP27.92■■■□□ 2.06
SYNGR1-207ENST00000489206 CEP170Q5SW79 1584 aa27.91■■■□□ 2.06
SYNGR1-207ENST00000489206 ROCK1Q13464 1354 aa27.88■■■□□ 2.05
SYNGR1-207ENST00000489206 KDM5BQ9UGL1 1544 aa27.88■■■□□ 2.05
SYNGR1-207ENST00000489206 ITSN2Q9NZM3 1697 aa27.87■■■□□ 2.05
SYNGR1-207ENST00000489206 KDM6BO15054 1643 aa27.86■■■□□ 2.05
SYNGR1-207ENST00000489206 CDK11AQ9UQ88 783 aaPredicted RBP27.86■■■□□ 2.05
SYNGR1-207ENST00000489206 ADCY10Q96PN6 1610 aa27.85■■■□□ 2.05
SYNGR1-207ENST00000489206 RRP7BPQ9NSQ0 103 aa27.85■■■□□ 2.05
SYNGR1-207ENST00000489206 DAPK1P53355 1430 aa27.85■■■□□ 2.05
SYNGR1-207ENST00000489206 DENND4BO75064 1496 aaPredicted RBP27.83■■■□□ 2.05
SYNGR1-207ENST00000489206 NUP160Q12769 1436 aa27.81■■■□□ 2.04
SYNGR1-207ENST00000489206 DDX10Q13206 875 aaKnown RBP27.81■■■□□ 2.04
SYNGR1-207ENST00000489206 CHIC2Q9UKJ5 165 aa27.8■■■□□ 2.04
SYNGR1-207ENST00000489206 TROQ12816 1431 aaPredicted RBP27.8■■■□□ 2.04
SYNGR1-207ENST00000489206 CHD1O14646 1710 aa27.79■■■□□ 2.04
SYNGR1-207ENST00000489206 CARMIL2Q6F5E8 1435 aa27.78■■■□□ 2.04
SYNGR1-207ENST00000489206 CHMP7Q8WUX9 453 aaPredicted RBP27.77■■■□□ 2.04
SYNGR1-207ENST00000489206 ABCC5O15440 1437 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms