RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 RANGAP1P46060 587 aaPredicted RBP31.46■■■□□ 2.63
ATP1A1-208ENST00000488733 VPS8Q8N3P4 1428 aa31.46■■■□□ 2.63
ATP1A1-208ENST00000488733 CTTNBP2Q8WZ74 1663 aa31.46■■■□□ 2.63
ATP1A1-208ENST00000488733 CHMP7Q8WUX9 453 aaPredicted RBP31.44■■■□□ 2.62
ATP1A1-208ENST00000488733 FBLN2P98095 1184 aa31.39■■■□□ 2.62
ATP1A1-208ENST00000488733 ARAP1Q96P48 1450 aa31.33■■■□□ 2.61
ATP1A1-208ENST00000488733 ARHGAP35Q9NRY4 1499 aa31.31■■■□□ 2.6
ATP1A1-208ENST00000488733 PPARGC1BQ86YN6 1023 aaKnown RBP31.28■■■□□ 2.6
ATP1A1-208ENST00000488733 IQGAP2Q13576 1575 aa31.28■■■□□ 2.6
ATP1A1-208ENST00000488733 CEP170Q5SW79 1584 aa31.27■■■□□ 2.6
ATP1A1-208ENST00000488733 NUP160Q12769 1436 aa31.27■■■□□ 2.6
ATP1A1-208ENST00000488733 KIAA0586Q9BVV6 1533 aa31.26■■■□□ 2.6
ATP1A1-208ENST00000488733 APLP2Q06481 763 aa31.23■■■□□ 2.59
ATP1A1-208ENST00000488733 CHD1O14646 1710 aa31.23■■■□□ 2.59
ATP1A1-208ENST00000488733 EFCAB5A4FU69 1503 aa31.23■■■□□ 2.59
ATP1A1-208ENST00000488733 SAMD9Q5K651 1589 aa31.14■■■□□ 2.58
ATP1A1-208ENST00000488733 UGGT2Q9NYU1 1516 aa31.13■■■□□ 2.57
ATP1A1-208ENST00000488733 P3H3Q8IVL6 736 aa31.1■■■□□ 2.57
ATP1A1-208ENST00000488733 FHOD3Q2V2M9 1422 aa31.08■■■□□ 2.57
ATP1A1-208ENST00000488733 JPH4Q96JJ6 628 aa30.99■■■□□ 2.55
ATP1A1-208ENST00000488733 DISP1Q96F81 1524 aa30.98■■■□□ 2.55
ATP1A1-208ENST00000488733 TTBK1Q5TCY1 1321 aaPredicted RBP30.98■■■□□ 2.55
ATP1A1-208ENST00000488733 KIAA0556O60303 1618 aa30.96■■■□□ 2.55
ATP1A1-208ENST00000488733 FMN1Q68DA7 1419 aa30.94■■■□□ 2.54
ATP1A1-208ENST00000488733 MAP3K1Q13233 1512 aa30.92■■■□□ 2.54
ATP1A1-208ENST00000488733 CLASP1Q7Z460 1538 aa30.91■■■□□ 2.54
ATP1A1-208ENST00000488733 CARMIL2Q6F5E8 1435 aa30.9■■■□□ 2.54
ATP1A1-208ENST00000488733 PCF11O94913 1555 aaKnown RBP30.87■■■□□ 2.53
ATP1A1-208ENST00000488733 HRCP23327 699 aa30.87■■■□□ 2.53
ATP1A1-208ENST00000488733 SHROOM2Q13796 1616 aa30.86■■■□□ 2.53
ATP1A1-208ENST00000488733 PRG4Q92954 1404 aaPredicted RBP30.84■■■□□ 2.53
ATP1A1-208ENST00000488733 FYCO1Q9BQS8 1478 aa30.83■■■□□ 2.53
ATP1A1-208ENST00000488733 CASKIN1Q8WXD9 1431 aa30.83■■■□□ 2.53
ATP1A1-208ENST00000488733 TIAM1Q13009 1591 aa30.8■■■□□ 2.52
ATP1A1-208ENST00000488733 KANK4Q5T7N3 995 aaPredicted RBP30.79■■■□□ 2.52
ATP1A1-208ENST00000488733 OSCARQ8IYS5 282 aa30.76■■■□□ 2.52
ATP1A1-208ENST00000488733 ATP1B4Q9UN42 357 aaPredicted RBP30.73■■■□□ 2.51
ATP1A1-208ENST00000488733 CFAP43Q8NDM7 1665 aa30.71■■■□□ 2.51
ATP1A1-208ENST00000488733 LRRC9Q6ZRR7 1453 aa30.67■■■□□ 2.5
ATP1A1-208ENST00000488733 ERCC6L2Q5T890 1561 aa30.65■■■□□ 2.5
ATP1A1-208ENST00000488733 HECW1Q76N89 1606 aa30.65■■■□□ 2.5
ATP1A1-208ENST00000488733 PTPRGP23470 1445 aa30.61■■■□□ 2.49
ATP1A1-208ENST00000488733 RAPGEF6Q8TEU7 1601 aa30.6■■■□□ 2.49
ATP1A1-208ENST00000488733 PLB1Q6P1J6 1458 aa30.59■■■□□ 2.49
ATP1A1-208ENST00000488733 CCDC18Q5T9S5 1454 aa30.57■■■□□ 2.48
ATP1A1-208ENST00000488733 LRRIQ1Q96JM4 1722 aa30.56■■■□□ 2.48
ATP1A1-208ENST00000488733 RRBP1Q9P2E9 1410 aaKnown RBP30.56■■■□□ 2.48
ATP1A1-208ENST00000488733 NUP153P49790 1475 aaKnown RBP30.54■■■□□ 2.48
ATP1A1-208ENST00000488733 EPRSP07814 1512 aaKnown RBP30.54■■■□□ 2.48
ATP1A1-208ENST00000488733 ABCA8O94911 1581 aa30.53■■■□□ 2.48
ATP1A1-208ENST00000488733 ZEB1P37275 1124 aaPredicted RBP30.53■■■□□ 2.48
ATP1A1-208ENST00000488733 CDK13Q14004 1512 aaKnown RBP30.47■■■□□ 2.47
ATP1A1-208ENST00000488733 ARID3CA6NKF2 412 aa30.46■■■□□ 2.47
ATP1A1-208ENST00000488733 CCNB3Q8WWL7 1395 aa30.44■■■□□ 2.46
ATP1A1-208ENST00000488733 UACAQ9BZF9 1416 aa30.43■■■□□ 2.46
ATP1A1-208ENST00000488733 MTUS2Q5JR59 1369 aa30.42■■■□□ 2.46
ATP1A1-208ENST00000488733 HNRNPUL2Q1KMD3 747 aaKnown RBP30.42■■■□□ 2.46
ATP1A1-208ENST00000488733 EHBP1L1Q8N3D4 1523 aa30.37■■■□□ 2.45
ATP1A1-208ENST00000488733 PHLDB1Q86UU1 1377 aa30.37■■■□□ 2.45
ATP1A1-208ENST00000488733 MAGI3Q5TCQ9 1506 aa30.36■■■□□ 2.45
ATP1A1-208ENST00000488733 ABCC2Q92887 1545 aa30.35■■■□□ 2.45
ATP1A1-208ENST00000488733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.34■■■□□ 2.45
ATP1A1-208ENST00000488733 CCER1Q8TC90 406 aaPredicted RBP30.32■■■□□ 2.44
ATP1A1-208ENST00000488733 ATP10BO94823 1461 aa30.32■■■□□ 2.44
ATP1A1-208ENST00000488733 CDK11AQ9UQ88 783 aaPredicted RBP30.3■■■□□ 2.44
ATP1A1-208ENST00000488733 UHRF1BP1LA0JNW5 1464 aa30.3■■■□□ 2.44
ATP1A1-208ENST00000488733 SUPT6HQ7KZ85 1726 aaKnown RBP30.29■■■□□ 2.44
ATP1A1-208ENST00000488733 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
ATP1A1-208ENST00000488733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.25■■■□□ 2.432e-7■■■■■ 55.1
ATP1A1-208ENST00000488733 NCOA2Q15596 1464 aa30.24■■■□□ 2.43
ATP1A1-208ENST00000488733 TROQ12816 1431 aaPredicted RBP30.22■■■□□ 2.43
ATP1A1-208ENST00000488733 ADCY10Q96PN6 1610 aa30.19■■■□□ 2.42
ATP1A1-208ENST00000488733 FGD6Q6ZV73 1430 aa30.18■■■□□ 2.42
ATP1A1-208ENST00000488733 KDM5BQ9UGL1 1544 aa30.18■■■□□ 2.42
ATP1A1-208ENST00000488733 PLEKHD1A6NEE1 506 aa30.17■■■□□ 2.42
ATP1A1-208ENST00000488733 MYOM3Q5VTT5 1437 aa30.16■■■□□ 2.42
ATP1A1-208ENST00000488733 FAM50AQ14320 339 aaKnown RBP30.14■■■□□ 2.42
ATP1A1-208ENST00000488733 ZCCHC11Q5TAX3 1644 aaKnown RBP30.13■■■□□ 2.41
ATP1A1-208ENST00000488733 RIMBP3CA6NJZ7 1639 aa30.12■■■□□ 2.41
ATP1A1-208ENST00000488733 RIMBP3BA6NNM3 1639 aa30.12■■■□□ 2.41
ATP1A1-208ENST00000488733 RIMBP3Q9UFD9 1639 aa30.12■■■□□ 2.41
ATP1A1-208ENST00000488733 ITGAEP38570 1179 aa30.08■■■□□ 2.41
ATP1A1-208ENST00000488733 KIF14Q15058 1648 aa30.06■■■□□ 2.4
ATP1A1-208ENST00000488733 MIA2Q96PC5 1412 aa30.01■■■□□ 2.39
ATP1A1-208ENST00000488733 PTPN23Q9H3S7 1636 aa29.98■■■□□ 2.39
ATP1A1-208ENST00000488733 CYB5RLQ6IPT4 315 aa29.97■■■□□ 2.39
ATP1A1-208ENST00000488733 TCOF1Q13428 1488 aaKnown RBP29.97■■■□□ 2.39
ATP1A1-208ENST00000488733 ABCC10Q5T3U5 1492 aa29.96■■■□□ 2.39
ATP1A1-208ENST00000488733 NPM1P06748 294 aaKnown RBP eCLIP29.94■■■□□ 2.38
ATP1A1-208ENST00000488733 SETD5Q9C0A6 1442 aa29.94■■■□□ 2.38
ATP1A1-208ENST00000488733 GPATCH8Q9UKJ3 1502 aaKnown RBP29.92■■■□□ 2.38
ATP1A1-208ENST00000488733 WDR7Q9Y4E6 1490 aa29.91■■■□□ 2.38
ATP1A1-208ENST00000488733 CLSPNQ9HAW4 1339 aa29.91■■■□□ 2.38
ATP1A1-208ENST00000488733 ITSN2Q9NZM3 1697 aa29.9■■■□□ 2.38
ATP1A1-208ENST00000488733 ASXL2Q76L83 1435 aa29.88■■■□□ 2.37
ATP1A1-208ENST00000488733 KCNH8Q96L42 1107 aa29.88■■■□□ 2.37
ATP1A1-208ENST00000488733 RAB3GAP2Q9H2M9 1393 aa29.88■■■□□ 2.37
ATP1A1-208ENST00000488733 DHX57Q6P158 1386 aaKnown RBP29.86■■■□□ 2.37
ATP1A1-208ENST00000488733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.86■■■□□ 2.373e-9■■■□□ 18.8
ATP1A1-208ENST00000488733 TTC37Q6PGP7 1564 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms