RNA–Protein interactions for RNA: ENST00000488524.1

REG1A-204, Transcript of regenerating family member 1 alpha, humanhuman

TSL 1 (best)

Gene REG1A, Length 901 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REG1A-204ENST00000488524 ABCA5Q8WWZ7 1642 aa12.47□□□□□ -0.41
REG1A-204ENST00000488524 CUL7Q14999 1698 aa12.46□□□□□ -0.41
REG1A-204ENST00000488524 ARAP1Q96P48 1450 aa12.46□□□□□ -0.42
REG1A-204ENST00000488524 IFT140Q96RY7 1462 aa12.46□□□□□ -0.42
REG1A-204ENST00000488524 MAP3K1Q13233 1512 aa12.44□□□□□ -0.42
REG1A-204ENST00000488524 PBRM1Q86U86 1689 aa12.44□□□□□ -0.42
REG1A-204ENST00000488524 TTBK1Q5TCY1 1321 aaPredicted RBP12.42□□□□□ -0.42
REG1A-204ENST00000488524 GAPVD1Q14C86 1478 aa12.41□□□□□ -0.42
REG1A-204ENST00000488524 IGF1RP08069 1367 aa12.41□□□□□ -0.42
REG1A-204ENST00000488524 CARMIL1Q5VZK9 1371 aa12.39□□□□□ -0.43
REG1A-204ENST00000488524 ZNF316A6NFI3 1004 aaPredicted RBP12.38□□□□□ -0.43
REG1A-204ENST00000488524 DIEXFQ68CQ4 756 aaKnown RBP12.38□□□□□ -0.43
REG1A-204ENST00000488524 ARHGAP35Q9NRY4 1499 aa12.38□□□□□ -0.43
REG1A-204ENST00000488524 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
REG1A-204ENST00000488524 HNRNPUL2Q1KMD3 747 aaKnown RBP12.37□□□□□ -0.43
REG1A-204ENST00000488524 TDRD9Q8NDG6 1382 aaKnown RBP12.37□□□□□ -0.43
REG1A-204ENST00000488524 EIF4G3O43432 1585 aaKnown RBP12.37□□□□□ -0.43
REG1A-204ENST00000488524 FHAD1B1AJZ9 1412 aa12.36□□□□□ -0.43
REG1A-204ENST00000488524 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
REG1A-204ENST00000488524 GRIN2BQ13224 1484 aa12.34□□□□□ -0.43
REG1A-204ENST00000488524 CENPBP07199 599 aaPredicted RBP12.33□□□□□ -0.44
REG1A-204ENST00000488524 CTTNBP2Q8WZ74 1663 aa12.32□□□□□ -0.44
REG1A-204ENST00000488524 ADAMTS12P58397 1594 aa12.32□□□□□ -0.44
REG1A-204ENST00000488524 PIAS4Q8N2W9 510 aaPredicted RBP12.32□□□□□ -0.44
REG1A-204ENST00000488524 RANGAP1P46060 587 aaPredicted RBP12.31□□□□□ -0.44
REG1A-204ENST00000488524 EFCAB5A4FU69 1503 aa12.31□□□□□ -0.44
REG1A-204ENST00000488524 ZNF608Q9ULD9 1512 aaPredicted RBP12.31□□□□□ -0.44
REG1A-204ENST00000488524 AQRO60306 1485 aaKnown RBP eCLIP12.3□□□□□ -0.44
REG1A-204ENST00000488524 TIAM1Q13009 1591 aa12.3□□□□□ -0.44
REG1A-204ENST00000488524 CCNB3Q8WWL7 1395 aa12.29□□□□□ -0.44
REG1A-204ENST00000488524 MAGI1Q96QZ7 1491 aaPredicted RBP12.27□□□□□ -0.44
REG1A-204ENST00000488524 KANK4Q5T7N3 995 aaPredicted RBP12.26□□□□□ -0.45
REG1A-204ENST00000488524 SNAPC4Q5SXM2 1469 aa12.26□□□□□ -0.45
REG1A-204ENST00000488524 CFAP43Q8NDM7 1665 aa12.26□□□□□ -0.45
REG1A-204ENST00000488524 DHX57Q6P158 1386 aaKnown RBP12.24□□□□□ -0.45
REG1A-204ENST00000488524 PELP1Q8IZL8 1130 aaKnown RBP12.24□□□□□ -0.45
REG1A-204ENST00000488524 ACIN1Q9UKV3 1341 aaKnown RBP12.24□□□□□ -0.45
REG1A-204ENST00000488524 LRRC9Q6ZRR7 1453 aa12.23□□□□□ -0.45
REG1A-204ENST00000488524 FYCO1Q9BQS8 1478 aa12.22□□□□□ -0.45
REG1A-204ENST00000488524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.22□□□□□ -0.45
REG1A-204ENST00000488524 SYNJ2O15056 1496 aa12.21□□□□□ -0.46
REG1A-204ENST00000488524 FMN1Q68DA7 1419 aa12.2□□□□□ -0.46
REG1A-204ENST00000488524 CASKIN1Q8WXD9 1431 aa12.2□□□□□ -0.46
REG1A-204ENST00000488524 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
REG1A-204ENST00000488524 GRIN2AQ12879 1464 aa12.19□□□□□ -0.46
REG1A-204ENST00000488524 IQGAP2Q13576 1575 aa12.17□□□□□ -0.46
REG1A-204ENST00000488524 TIMELESSQ9UNS1 1208 aa12.16□□□□□ -0.46
REG1A-204ENST00000488524 PCF11O94913 1555 aaKnown RBP12.16□□□□□ -0.46
REG1A-204ENST00000488524 SCAF1Q9H7N4 1312 aaKnown RBP12.15□□□□□ -0.46
REG1A-204ENST00000488524 SETD5Q9C0A6 1442 aa12.15□□□□□ -0.46
REG1A-204ENST00000488524 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
REG1A-204ENST00000488524 CHD1O14646 1710 aa12.14□□□□□ -0.47
REG1A-204ENST00000488524 SAMD9Q5K651 1589 aa12.12□□□□□ -0.47
REG1A-204ENST00000488524 KIAA0586Q9BVV6 1533 aa12.11□□□□□ -0.47
REG1A-204ENST00000488524 CEP170Q5SW79 1584 aa12.1□□□□□ -0.47
REG1A-204ENST00000488524 RAB3GAP2Q9H2M9 1393 aa12.1□□□□□ -0.47
REG1A-204ENST00000488524 FBLN2P98095 1184 aa12.1□□□□□ -0.47
REG1A-204ENST00000488524 NEUROD1Q13562 356 aa12.09□□□□□ -0.47
REG1A-204ENST00000488524 FHOD3Q2V2M9 1422 aa12.09□□□□□ -0.47
REG1A-204ENST00000488524 UGGT2Q9NYU1 1516 aa12.08□□□□□ -0.48
REG1A-204ENST00000488524 NUP160Q12769 1436 aa12.08□□□□□ -0.48
REG1A-204ENST00000488524 PHLDB1Q86UU1 1377 aa12.07□□□□□ -0.48
REG1A-204ENST00000488524 CCDC18Q5T9S5 1454 aa12.05□□□□□ -0.48
REG1A-204ENST00000488524 SUPT6HQ7KZ85 1726 aaKnown RBP12.04□□□□□ -0.48
REG1A-204ENST00000488524 ZBTB22O15209 634 aa12.04□□□□□ -0.48
REG1A-204ENST00000488524 FAM50AQ14320 339 aaKnown RBP12.04□□□□□ -0.48
REG1A-204ENST00000488524 MIER1Q8N108 512 aa12.04□□□□□ -0.48
REG1A-204ENST00000488524 EHBP1L1Q8N3D4 1523 aa12.04□□□□□ -0.48
REG1A-204ENST00000488524 KIAA0556O60303 1618 aa12.04□□□□□ -0.48
REG1A-204ENST00000488524 MTUS2Q5JR59 1369 aa12.04□□□□□ -0.48
REG1A-204ENST00000488524 P3H3Q8IVL6 736 aa12.03□□□□□ -0.48
REG1A-204ENST00000488524 ATP1B4Q9UN42 357 aaPredicted RBP12.03□□□□□ -0.48
REG1A-204ENST00000488524 FGD6Q6ZV73 1430 aa12.03□□□□□ -0.48
REG1A-204ENST00000488524 ITGAEP38570 1179 aa12.02□□□□□ -0.49
REG1A-204ENST00000488524 MAPKBP1O60336 1514 aa12.01□□□□□ -0.49
REG1A-204ENST00000488524 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
REG1A-204ENST00000488524 CARMIL2Q6F5E8 1435 aa12□□□□□ -0.49
REG1A-204ENST00000488524 HECW1Q76N89 1606 aa12□□□□□ -0.49
REG1A-204ENST00000488524 MYOM3Q5VTT5 1437 aa11.99□□□□□ -0.49
REG1A-204ENST00000488524 DISP1Q96F81 1524 aa11.97□□□□□ -0.49
REG1A-204ENST00000488524 SHROOM2Q13796 1616 aa11.97□□□□□ -0.49
REG1A-204ENST00000488524 NCOA2Q15596 1464 aa11.96□□□□□ -0.49
REG1A-204ENST00000488524 HFM1A2PYH4 1435 aa11.96□□□□□ -0.49
REG1A-204ENST00000488524 CNKSR2Q8WXI2 1034 aa11.96□□□□□ -0.49
REG1A-204ENST00000488524 JPH4Q96JJ6 628 aa11.96□□□□□ -0.49
REG1A-204ENST00000488524 ARHGEF11O15085 1522 aa11.95□□□□□ -0.5
REG1A-204ENST00000488524 CLASP1Q7Z460 1538 aa11.95□□□□□ -0.5
REG1A-204ENST00000488524 AKNAQ7Z591 1439 aa11.94□□□□□ -0.5
REG1A-204ENST00000488524 UACAQ9BZF9 1416 aa11.94□□□□□ -0.5
REG1A-204ENST00000488524 LRRIQ1Q96JM4 1722 aa11.94□□□□□ -0.5
REG1A-204ENST00000488524 MIA2Q96PC5 1412 aa11.94□□□□□ -0.5
REG1A-204ENST00000488524 TCOF1Q13428 1488 aaKnown RBP11.93□□□□□ -0.5
REG1A-204ENST00000488524 RAPGEF6Q8TEU7 1601 aa11.93□□□□□ -0.5
REG1A-204ENST00000488524 PTPN23Q9H3S7 1636 aa11.93□□□□□ -0.5
REG1A-204ENST00000488524 PPP1R15AO75807 674 aaPredicted RBP11.9□□□□□ -0.5
REG1A-204ENST00000488524 PRG4Q92954 1404 aaPredicted RBP11.9□□□□□ -0.5
REG1A-204ENST00000488524 YTHDC1Q96MU7 727 aaKnown RBP11.89□□□□□ -0.51
REG1A-204ENST00000488524 GCC2Q8IWJ2 1684 aa11.89□□□□□ -0.51
REG1A-204ENST00000488524 EPRSP07814 1512 aaKnown RBP11.89□□□□□ -0.51
REG1A-204ENST00000488524 OSCARQ8IYS5 282 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms