RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 CHMP7Q8WUX9 453 aaPredicted RBP17.06■□□□□ 0.32
HLA-DMB-261ENST00000487996 EHMT2Q96KQ7 1210 aa17.06■□□□□ 0.32
HLA-DMB-261ENST00000487996 TNIKQ9UKE5 1360 aa17.05■□□□□ 0.32
HLA-DMB-261ENST00000487996 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
HLA-DMB-261ENST00000487996 ADRA2BP18089 450 aa17.04■□□□□ 0.32
HLA-DMB-261ENST00000487996 FBLN2P98095 1184 aa17.01■□□□□ 0.31
HLA-DMB-261ENST00000487996 CTTNBP2Q8WZ74 1663 aa16.99■□□□□ 0.31
HLA-DMB-261ENST00000487996 CHD1O14646 1710 aa16.97■□□□□ 0.31
HLA-DMB-261ENST00000487996 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
HLA-DMB-261ENST00000487996 NUP160Q12769 1436 aa16.94■□□□□ 0.3
HLA-DMB-261ENST00000487996 PIAS4Q8N2W9 510 aaPredicted RBP16.93■□□□□ 0.3
HLA-DMB-261ENST00000487996 KIAA0586Q9BVV6 1533 aa16.93■□□□□ 0.3
HLA-DMB-261ENST00000487996 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
HLA-DMB-261ENST00000487996 IQGAP2Q13576 1575 aa16.91■□□□□ 0.3
HLA-DMB-261ENST00000487996 CEP170Q5SW79 1584 aa16.91■□□□□ 0.3
HLA-DMB-261ENST00000487996 CLIP1P30622 1438 aa16.87■□□□□ 0.29
HLA-DMB-261ENST00000487996 EFCAB5A4FU69 1503 aa16.85■□□□□ 0.29
HLA-DMB-261ENST00000487996 MSH5O43196 834 aa16.84■□□□□ 0.29
HLA-DMB-261ENST00000487996 UGGT2Q9NYU1 1516 aa16.82■□□□□ 0.28
HLA-DMB-261ENST00000487996 RANGAP1P46060 587 aaPredicted RBP16.8■□□□□ 0.28
HLA-DMB-261ENST00000487996 CLASP1Q7Z460 1538 aa16.8■□□□□ 0.28
HLA-DMB-261ENST00000487996 JPH4Q96JJ6 628 aa16.78■□□□□ 0.28
HLA-DMB-261ENST00000487996 SAMD9Q5K651 1589 aa16.78■□□□□ 0.28
HLA-DMB-261ENST00000487996 ARHGAP35Q9NRY4 1499 aa16.77■□□□□ 0.28
HLA-DMB-261ENST00000487996 CARMIL2Q6F5E8 1435 aa16.76■□□□□ 0.27
HLA-DMB-261ENST00000487996 SHROOM2Q13796 1616 aa16.75■□□□□ 0.27
HLA-DMB-261ENST00000487996 RIMBP3CA6NJZ7 1639 aa16.74■□□□□ 0.27
HLA-DMB-261ENST00000487996 RIMBP3BA6NNM3 1639 aa16.74■□□□□ 0.27
HLA-DMB-261ENST00000487996 RIMBP3Q9UFD9 1639 aa16.74■□□□□ 0.27
HLA-DMB-261ENST00000487996 KIAA0556O60303 1618 aa16.73■□□□□ 0.27
HLA-DMB-261ENST00000487996 DISP1Q96F81 1524 aa16.71■□□□□ 0.27
HLA-DMB-261ENST00000487996 ARAP1Q96P48 1450 aa16.71■□□□□ 0.27
HLA-DMB-261ENST00000487996 PRG4Q92954 1404 aaPredicted RBP16.7■□□□□ 0.26
HLA-DMB-261ENST00000487996 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
HLA-DMB-261ENST00000487996 FMN1Q68DA7 1419 aa16.69■□□□□ 0.26
HLA-DMB-261ENST00000487996 FHOD3Q2V2M9 1422 aa16.69■□□□□ 0.26
HLA-DMB-261ENST00000487996 VPS8Q8N3P4 1428 aa16.69■□□□□ 0.26
HLA-DMB-261ENST00000487996 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
HLA-DMB-261ENST00000487996 CYB5RLQ6IPT4 315 aa16.59■□□□□ 0.25
HLA-DMB-261ENST00000487996 FYCO1Q9BQS8 1478 aa16.59■□□□□ 0.25
HLA-DMB-261ENST00000487996 PTPRGP23470 1445 aa16.58■□□□□ 0.24
HLA-DMB-261ENST00000487996 CASKIN1Q8WXD9 1431 aa16.58■□□□□ 0.24
HLA-DMB-261ENST00000487996 APLP2Q06481 763 aa16.56■□□□□ 0.24
HLA-DMB-261ENST00000487996 PCF11O94913 1555 aaKnown RBP16.56■□□□□ 0.24
HLA-DMB-261ENST00000487996 ERCC6L2Q5T890 1561 aa16.56■□□□□ 0.24
HLA-DMB-261ENST00000487996 HECW1Q76N89 1606 aa16.53■□□□□ 0.24
HLA-DMB-261ENST00000487996 RAPGEF6Q8TEU7 1601 aa16.53■□□□□ 0.24
HLA-DMB-261ENST00000487996 TTBK1Q5TCY1 1321 aaPredicted RBP16.52■□□□□ 0.24
HLA-DMB-261ENST00000487996 ATP1B4Q9UN42 357 aaPredicted RBP16.5■□□□□ 0.23
HLA-DMB-261ENST00000487996 CCDC18Q5T9S5 1454 aa16.5■□□□□ 0.23
HLA-DMB-261ENST00000487996 ABCA8O94911 1581 aa16.5■□□□□ 0.23
HLA-DMB-261ENST00000487996 MAP3K1Q13233 1512 aa16.49■□□□□ 0.23
HLA-DMB-261ENST00000487996 PLB1Q6P1J6 1458 aa16.49■□□□□ 0.23
HLA-DMB-261ENST00000487996 UACAQ9BZF9 1416 aa16.49■□□□□ 0.23
HLA-DMB-261ENST00000487996 ABCC2Q92887 1545 aa16.45■□□□□ 0.22
HLA-DMB-261ENST00000487996 UHRF1BP1LA0JNW5 1464 aa16.45■□□□□ 0.22
HLA-DMB-261ENST00000487996 NUP153P49790 1475 aaKnown RBP16.45■□□□□ 0.22
HLA-DMB-261ENST00000487996 CFAP43Q8NDM7 1665 aa16.45■□□□□ 0.22
HLA-DMB-261ENST00000487996 TIAM1Q13009 1591 aa16.44■□□□□ 0.22
HLA-DMB-261ENST00000487996 EPRSP07814 1512 aaKnown RBP16.44■□□□□ 0.22
HLA-DMB-261ENST00000487996 TRHP20396 242 aaPredicted RBP16.42■□□□□ 0.22
HLA-DMB-261ENST00000487996 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
HLA-DMB-261ENST00000487996 LRRIQ1Q96JM4 1722 aa16.39■□□□□ 0.22
HLA-DMB-261ENST00000487996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.37■□□□□ 0.21
HLA-DMB-261ENST00000487996 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
HLA-DMB-261ENST00000487996 CDK13Q14004 1512 aaKnown RBP16.37■□□□□ 0.21
HLA-DMB-261ENST00000487996 LRRC9Q6ZRR7 1453 aa16.37■□□□□ 0.21
HLA-DMB-261ENST00000487996 MTUS2Q5JR59 1369 aa16.36■□□□□ 0.21
HLA-DMB-261ENST00000487996 ADCY10Q96PN6 1610 aa16.36■□□□□ 0.21
HLA-DMB-261ENST00000487996 KDM5BQ9UGL1 1544 aa16.36■□□□□ 0.21
HLA-DMB-261ENST00000487996 ATP10BO94823 1461 aa16.36■□□□□ 0.21
HLA-DMB-261ENST00000487996 EHBP1L1Q8N3D4 1523 aa16.35■□□□□ 0.21
HLA-DMB-261ENST00000487996 ARID3CA6NKF2 412 aa16.33■□□□□ 0.21
HLA-DMB-261ENST00000487996 NPM1P06748 294 aaKnown RBP eCLIP16.32■□□□□ 0.2
HLA-DMB-261ENST00000487996 ZCCHC11Q5TAX3 1644 aaKnown RBP16.31■□□□□ 0.2
HLA-DMB-261ENST00000487996 PLEKHD1A6NEE1 506 aa16.31■□□□□ 0.2
HLA-DMB-261ENST00000487996 KANK4Q5T7N3 995 aaPredicted RBP16.31■□□□□ 0.2
HLA-DMB-261ENST00000487996 TROQ12816 1431 aaPredicted RBP16.3■□□□□ 0.2
HLA-DMB-261ENST00000487996 SUPT6HQ7KZ85 1726 aaKnown RBP16.29■□□□□ 0.2
HLA-DMB-261ENST00000487996 PPARGC1BQ86YN6 1023 aaKnown RBP16.28■□□□□ 0.2
HLA-DMB-261ENST00000487996 MAGI3Q5TCQ9 1506 aa16.26■□□□□ 0.19
HLA-DMB-261ENST00000487996 KIF14Q15058 1648 aa16.24■□□□□ 0.19
HLA-DMB-261ENST00000487996 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
HLA-DMB-261ENST00000487996 WDR7Q9Y4E6 1490 aa16.22■□□□□ 0.19
HLA-DMB-261ENST00000487996 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
HLA-DMB-261ENST00000487996 MAPKBP1O60336 1514 aa16.2■□□□□ 0.18
HLA-DMB-261ENST00000487996 ASXL2Q76L83 1435 aa16.2■□□□□ 0.18
HLA-DMB-261ENST00000487996 TRIM26Q12899 539 aaPredicted RBP16.16■□□□□ 0.18
HLA-DMB-261ENST00000487996 CCNB3Q8WWL7 1395 aa16.16■□□□□ 0.18
HLA-DMB-261ENST00000487996 MYOM3Q5VTT5 1437 aa16.16■□□□□ 0.18
HLA-DMB-261ENST00000487996 PHLDB1Q86UU1 1377 aa16.15■□□□□ 0.18
HLA-DMB-261ENST00000487996 ITSN2Q9NZM3 1697 aa16.15■□□□□ 0.18
HLA-DMB-261ENST00000487996 KCNH8Q96L42 1107 aa16.14■□□□□ 0.17
HLA-DMB-261ENST00000487996 ABCC10Q5T3U5 1492 aa16.13■□□□□ 0.17
HLA-DMB-261ENST00000487996 MIA2Q96PC5 1412 aa16.12■□□□□ 0.17
HLA-DMB-261ENST00000487996 RRBP1Q9P2E9 1410 aaKnown RBP16.12■□□□□ 0.17
HLA-DMB-261ENST00000487996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.12■□□□□ 0.17
HLA-DMB-261ENST00000487996 FGD6Q6ZV73 1430 aa16.11■□□□□ 0.17
HLA-DMB-261ENST00000487996 ABCA9Q8IUA7 1624 aa16.09■□□□□ 0.17
HLA-DMB-261ENST00000487996 GPATCH8Q9UKJ3 1502 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms