RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 KIF13AQ9H1H9 1805 aa19.59■□□□□ 0.73
RAB11FIP3-210ENST00000487899 KIAA0586Q9BVV6 1533 aa19.57■□□□□ 0.72
RAB11FIP3-210ENST00000487899 TRHP20396 242 aaPredicted RBP19.56■□□□□ 0.72
RAB11FIP3-210ENST00000487899 ADCY10Q96PN6 1610 aa19.54■□□□□ 0.72
RAB11FIP3-210ENST00000487899 IQGAP2Q13576 1575 aa19.53■□□□□ 0.72
RAB11FIP3-210ENST00000487899 CTTNBP2Q8WZ74 1663 aa19.49■□□□□ 0.71
RAB11FIP3-210ENST00000487899 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
RAB11FIP3-210ENST00000487899 JPH4Q96JJ6 628 aa19.49■□□□□ 0.71
RAB11FIP3-210ENST00000487899 MAPKBP1O60336 1514 aa19.44■□□□□ 0.7
RAB11FIP3-210ENST00000487899 RAPGEF2Q9Y4G8 1499 aa19.41■□□□□ 0.7
RAB11FIP3-210ENST00000487899 DIP2BQ9P265 1576 aa19.4■□□□□ 0.7
RAB11FIP3-210ENST00000487899 KIAA0556O60303 1618 aa19.38■□□□□ 0.69
RAB11FIP3-210ENST00000487899 DISP1Q96F81 1524 aa19.38■□□□□ 0.69
RAB11FIP3-210ENST00000487899 UGGT2Q9NYU1 1516 aa19.38■□□□□ 0.69
RAB11FIP3-210ENST00000487899 ABCC10Q5T3U5 1492 aa19.31■□□□□ 0.68
RAB11FIP3-210ENST00000487899 CARMIL2Q6F5E8 1435 aa19.31■□□□□ 0.68
RAB11FIP3-210ENST00000487899 PRXQ9BXM0 1461 aa19.3■□□□□ 0.68
RAB11FIP3-210ENST00000487899 TNIKQ9UKE5 1360 aa19.28■□□□□ 0.68
RAB11FIP3-210ENST00000487899 ABCC2Q92887 1545 aa19.27■□□□□ 0.68
RAB11FIP3-210ENST00000487899 TSPOAP1O95153 1857 aa19.26■□□□□ 0.67
RAB11FIP3-210ENST00000487899 PTPRGP23470 1445 aa19.26■□□□□ 0.67
RAB11FIP3-210ENST00000487899 UHRF1BP1LA0JNW5 1464 aa19.26■□□□□ 0.67
RAB11FIP3-210ENST00000487899 ZCCHC11Q5TAX3 1644 aaKnown RBP19.25■□□□□ 0.67
RAB11FIP3-210ENST00000487899 PPRC1Q5VV67 1664 aaKnown RBP19.23■□□□□ 0.67
RAB11FIP3-210ENST00000487899 UACAQ9BZF9 1416 aa19.18■□□□□ 0.66
RAB11FIP3-210ENST00000487899 KDM5BQ9UGL1 1544 aa19.18■□□□□ 0.66
RAB11FIP3-210ENST00000487899 GLI2P10070 1586 aa19.16■□□□□ 0.66
RAB11FIP3-210ENST00000487899 SAMD9Q5K651 1589 aa19.16■□□□□ 0.66
RAB11FIP3-210ENST00000487899 ABCA8O94911 1581 aa19.15■□□□□ 0.66
RAB11FIP3-210ENST00000487899 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
RAB11FIP3-210ENST00000487899 GOLGA3Q08378 1498 aa19.15■□□□□ 0.66
RAB11FIP3-210ENST00000487899 MAP3K4Q9Y6R4 1608 aa19.14■□□□□ 0.66
RAB11FIP3-210ENST00000487899 NPM1P06748 294 aaKnown RBP eCLIP19.14■□□□□ 0.65
RAB11FIP3-210ENST00000487899 ASXL2Q76L83 1435 aa19.14■□□□□ 0.65
RAB11FIP3-210ENST00000487899 KDM6BO15054 1643 aa19.14■□□□□ 0.65
RAB11FIP3-210ENST00000487899 TTBK1Q5TCY1 1321 aaPredicted RBP19.12■□□□□ 0.65
RAB11FIP3-210ENST00000487899 PLB1Q6P1J6 1458 aa19.11■□□□□ 0.65
RAB11FIP3-210ENST00000487899 FAM69CQ0P6D2 419 aa19.11■□□□□ 0.65
RAB11FIP3-210ENST00000487899 EEA1Q15075 1411 aa19.1■□□□□ 0.65
RAB11FIP3-210ENST00000487899 KIF21BO75037 1637 aa19.1■□□□□ 0.65
RAB11FIP3-210ENST00000487899 EPRSP07814 1512 aaKnown RBP19.07■□□□□ 0.64
RAB11FIP3-210ENST00000487899 WDR7Q9Y4E6 1490 aa19.03■□□□□ 0.64
RAB11FIP3-210ENST00000487899 CFAP43Q8NDM7 1665 aa19.02■□□□□ 0.64
RAB11FIP3-210ENST00000487899 RAPGEF6Q8TEU7 1601 aa19■□□□□ 0.63
RAB11FIP3-210ENST00000487899 CSRNP3Q8WYN3 585 aa19■□□□□ 0.63
RAB11FIP3-210ENST00000487899 EFCAB5A4FU69 1503 aa18.94■□□□□ 0.62
RAB11FIP3-210ENST00000487899 TEX14Q8IWB6 1497 aa18.91■□□□□ 0.62
RAB11FIP3-210ENST00000487899 ABCA9Q8IUA7 1624 aa18.9■□□□□ 0.62
RAB11FIP3-210ENST00000487899 COL17A1Q9UMD9 1497 aaPredicted RBP18.89■□□□□ 0.61
RAB11FIP3-210ENST00000487899 FHOD3Q2V2M9 1422 aa18.88■□□□□ 0.61
RAB11FIP3-210ENST00000487899 ATP10BO94823 1461 aa18.88■□□□□ 0.61
RAB11FIP3-210ENST00000487899 NUP153P49790 1475 aaKnown RBP18.88■□□□□ 0.61
RAB11FIP3-210ENST00000487899 MAGI3Q5TCQ9 1506 aa18.86■□□□□ 0.61
RAB11FIP3-210ENST00000487899 P3H3Q8IVL6 736 aa18.84■□□□□ 0.61
RAB11FIP3-210ENST00000487899 FAM9AQ8IZU1 332 aaPredicted RBP18.84■□□□□ 0.61
RAB11FIP3-210ENST00000487899 CHIC1Q5VXU3 224 aa18.83■□□□□ 0.6
RAB11FIP3-210ENST00000487899 CD109Q6YHK3 1445 aa18.79■□□□□ 0.6
RAB11FIP3-210ENST00000487899 LRRIQ1Q96JM4 1722 aa18.78■□□□□ 0.6
RAB11FIP3-210ENST00000487899 ARID3CA6NKF2 412 aa18.75■□□□□ 0.59
RAB11FIP3-210ENST00000487899 HECW1Q76N89 1606 aa18.74■□□□□ 0.59
RAB11FIP3-210ENST00000487899 TTC37Q6PGP7 1564 aa18.74■□□□□ 0.59
RAB11FIP3-210ENST00000487899 ARHGAP35Q9NRY4 1499 aa18.74■□□□□ 0.59
RAB11FIP3-210ENST00000487899 FRMPD1Q5SYB0 1578 aa18.73■□□□□ 0.59
RAB11FIP3-210ENST00000487899 KDM4FA0A1W2PPD8 638 aa18.73■□□□□ 0.59
RAB11FIP3-210ENST00000487899 CDK13Q14004 1512 aaKnown RBP18.73■□□□□ 0.59
RAB11FIP3-210ENST00000487899 ARAP3Q8WWN8 1544 aa18.71■□□□□ 0.59
RAB11FIP3-210ENST00000487899 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.59
RAB11FIP3-210ENST00000487899 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
RAB11FIP3-210ENST00000487899 KCNH8Q96L42 1107 aa18.7■□□□□ 0.58
RAB11FIP3-210ENST00000487899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.69■□□□□ 0.58
RAB11FIP3-210ENST00000487899 RICTORQ6R327 1708 aa18.69■□□□□ 0.58
RAB11FIP3-210ENST00000487899 CFAP74Q9C0B2 1584 aa18.68■□□□□ 0.58
RAB11FIP3-210ENST00000487899 NEO1Q92859 1461 aa18.66■□□□□ 0.58
RAB11FIP3-210ENST00000487899 PCF11O94913 1555 aaKnown RBP18.66■□□□□ 0.58
RAB11FIP3-210ENST00000487899 MYO5CQ9NQX4 1742 aa18.65■□□□□ 0.58
RAB11FIP3-210ENST00000487899 FMN1Q68DA7 1419 aa18.64■□□□□ 0.57
RAB11FIP3-210ENST00000487899 KIF14Q15058 1648 aa18.63■□□□□ 0.57
RAB11FIP3-210ENST00000487899 EHMT2Q96KQ7 1210 aa18.62■□□□□ 0.57
RAB11FIP3-210ENST00000487899 ARHGEF40Q8TER5 1519 aa18.6■□□□□ 0.57
RAB11FIP3-210ENST00000487899 UBTFP17480 764 aaKnown RBP18.59■□□□□ 0.57
RAB11FIP3-210ENST00000487899 PHLDB1Q86UU1 1377 aa18.57■□□□□ 0.56
RAB11FIP3-210ENST00000487899 ZMYM4Q5VZL5 1548 aa18.56■□□□□ 0.56
RAB11FIP3-210ENST00000487899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.56■□□□□ 0.56
RAB11FIP3-210ENST00000487899 HNRNPUL2Q1KMD3 747 aaKnown RBP18.56■□□□□ 0.56
RAB11FIP3-210ENST00000487899 FANCAO15360 1455 aa18.56■□□□□ 0.56
RAB11FIP3-210ENST00000487899 SIGLEC1Q9BZZ2 1709 aa18.54■□□□□ 0.56
RAB11FIP3-210ENST00000487899 ADAMTSL3P82987 1691 aa18.54■□□□□ 0.56
RAB11FIP3-210ENST00000487899 BCORL1Q5H9F3 1711 aa18.52■□□□□ 0.56
RAB11FIP3-210ENST00000487899 CDC42BPBQ9Y5S2 1711 aa18.52■□□□□ 0.56
RAB11FIP3-210ENST00000487899 PREX2Q70Z35 1606 aa18.51■□□□□ 0.55
RAB11FIP3-210ENST00000487899 PLEKHD1A6NEE1 506 aa18.5■□□□□ 0.55
RAB11FIP3-210ENST00000487899 FYCO1Q9BQS8 1478 aa18.49■□□□□ 0.55
RAB11FIP3-210ENST00000487899 CDC42BPAQ5VT25 1732 aa18.49■□□□□ 0.55
RAB11FIP3-210ENST00000487899 AKNAQ7Z591 1439 aa18.49■□□□□ 0.55
RAB11FIP3-210ENST00000487899 CASKIN1Q8WXD9 1431 aa18.49■□□□□ 0.55
RAB11FIP3-210ENST00000487899 CCDC18Q5T9S5 1454 aa18.48■□□□□ 0.55
RAB11FIP3-210ENST00000487899 TROQ12816 1431 aaPredicted RBP18.48■□□□□ 0.55
RAB11FIP3-210ENST00000487899 DENND4BO75064 1496 aaPredicted RBP18.47■□□□□ 0.55
RAB11FIP3-210ENST00000487899 MADDQ8WXG6 1647 aa18.47■□□□□ 0.55
RAB11FIP3-210ENST00000487899 HECW2Q9P2P5 1572 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms