RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 ERCC6L2Q5T890 1561 aa17.55■□□□□ 0.4
RNF220-215ENST00000487332 RAPGEF2Q9Y4G8 1499 aa17.51■□□□□ 0.39
RNF220-215ENST00000487332 PRG4Q92954 1404 aaPredicted RBP17.5■□□□□ 0.39
RNF220-215ENST00000487332 JPH4Q96JJ6 628 aa17.48■□□□□ 0.39
RNF220-215ENST00000487332 IQGAP2Q13576 1575 aa17.47■□□□□ 0.39
RNF220-215ENST00000487332 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
RNF220-215ENST00000487332 EEA1Q15075 1411 aa17.44■□□□□ 0.38
RNF220-215ENST00000487332 UGGT2Q9NYU1 1516 aa17.4■□□□□ 0.38
RNF220-215ENST00000487332 CTTNBP2Q8WZ74 1663 aa17.38■□□□□ 0.37
RNF220-215ENST00000487332 CARMIL2Q6F5E8 1435 aa17.37■□□□□ 0.37
RNF220-215ENST00000487332 DISP1Q96F81 1524 aa17.34■□□□□ 0.37
RNF220-215ENST00000487332 TNIKQ9UKE5 1360 aa17.32■□□□□ 0.36
RNF220-215ENST00000487332 KIAA0556O60303 1618 aa17.32■□□□□ 0.36
RNF220-215ENST00000487332 ADCY10Q96PN6 1610 aa17.31■□□□□ 0.36
RNF220-215ENST00000487332 MAPKBP1O60336 1514 aa17.3■□□□□ 0.36
RNF220-215ENST00000487332 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
RNF220-215ENST00000487332 GOLGA3Q08378 1498 aa17.27■□□□□ 0.36
RNF220-215ENST00000487332 PTPRGP23470 1445 aa17.27■□□□□ 0.35
RNF220-215ENST00000487332 UHRF1BP1LA0JNW5 1464 aa17.26■□□□□ 0.35
RNF220-215ENST00000487332 KIF21BO75037 1637 aa17.26■□□□□ 0.35
RNF220-215ENST00000487332 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
RNF220-215ENST00000487332 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
RNF220-215ENST00000487332 ABCC2Q92887 1545 aa17.21■□□□□ 0.35
RNF220-215ENST00000487332 UACAQ9BZF9 1416 aa17.2■□□□□ 0.34
RNF220-215ENST00000487332 SAMD9Q5K651 1589 aa17.18■□□□□ 0.34
RNF220-215ENST00000487332 ABCC10Q5T3U5 1492 aa17.18■□□□□ 0.34
RNF220-215ENST00000487332 KDM5BQ9UGL1 1544 aa17.16■□□□□ 0.34
RNF220-215ENST00000487332 DIP2BQ9P265 1576 aa17.16■□□□□ 0.34
RNF220-215ENST00000487332 NPM1P06748 294 aaKnown RBP eCLIP17.16■□□□□ 0.34
RNF220-215ENST00000487332 KIF13AQ9H1H9 1805 aa17.15■□□□□ 0.34
RNF220-215ENST00000487332 ABCA8O94911 1581 aa17.13■□□□□ 0.33
RNF220-215ENST00000487332 PLB1Q6P1J6 1458 aa17.11■□□□□ 0.33
RNF220-215ENST00000487332 EFCAB5A4FU69 1503 aa17.1■□□□□ 0.33
RNF220-215ENST00000487332 ZCCHC11Q5TAX3 1644 aaKnown RBP17.09■□□□□ 0.33
RNF220-215ENST00000487332 GLI2P10070 1586 aa17.08■□□□□ 0.32
RNF220-215ENST00000487332 ASXL2Q76L83 1435 aa17.06■□□□□ 0.32
RNF220-215ENST00000487332 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
RNF220-215ENST00000487332 TTBK1Q5TCY1 1321 aaPredicted RBP17.01■□□□□ 0.31
RNF220-215ENST00000487332 WDR7Q9Y4E6 1490 aa17■□□□□ 0.31
RNF220-215ENST00000487332 RAPGEF6Q8TEU7 1601 aa17■□□□□ 0.31
RNF220-215ENST00000487332 FAM69CQ0P6D2 419 aa17■□□□□ 0.31
RNF220-215ENST00000487332 EPRSP07814 1512 aaKnown RBP17■□□□□ 0.31
RNF220-215ENST00000487332 MAP3K4Q9Y6R4 1608 aa16.97■□□□□ 0.31
RNF220-215ENST00000487332 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.3
RNF220-215ENST00000487332 PPRC1Q5VV67 1664 aaKnown RBP16.94■□□□□ 0.3
RNF220-215ENST00000487332 ATP10BO94823 1461 aa16.93■□□□□ 0.3
RNF220-215ENST00000487332 NUP153P49790 1475 aaKnown RBP16.93■□□□□ 0.3
RNF220-215ENST00000487332 ARHGAP35Q9NRY4 1499 aa16.91■□□□□ 0.3
RNF220-215ENST00000487332 CFAP43Q8NDM7 1665 aa16.91■□□□□ 0.3
RNF220-215ENST00000487332 P3H3Q8IVL6 736 aa16.9■□□□□ 0.3
RNF220-215ENST00000487332 TEX14Q8IWB6 1497 aa16.9■□□□□ 0.3
RNF220-215ENST00000487332 FMN1Q68DA7 1419 aa16.89■□□□□ 0.29
RNF220-215ENST00000487332 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
RNF220-215ENST00000487332 KDM6BO15054 1643 aa16.88■□□□□ 0.29
RNF220-215ENST00000487332 MAGI3Q5TCQ9 1506 aa16.86■□□□□ 0.29
RNF220-215ENST00000487332 HECW1Q76N89 1606 aa16.85■□□□□ 0.29
RNF220-215ENST00000487332 ABCA9Q8IUA7 1624 aa16.84■□□□□ 0.29
RNF220-215ENST00000487332 TSPOAP1O95153 1857 aa16.84■□□□□ 0.29
RNF220-215ENST00000487332 CD109Q6YHK3 1445 aa16.8■□□□□ 0.28
RNF220-215ENST00000487332 RANGAP1P46060 587 aaPredicted RBP16.79■□□□□ 0.28
RNF220-215ENST00000487332 CDK13Q14004 1512 aaKnown RBP16.75■□□□□ 0.27
RNF220-215ENST00000487332 CLIP1P30622 1438 aa16.74■□□□□ 0.27
RNF220-215ENST00000487332 PHLDB1Q86UU1 1377 aa16.74■□□□□ 0.27
RNF220-215ENST00000487332 CASKIN1Q8WXD9 1431 aa16.73■□□□□ 0.27
RNF220-215ENST00000487332 EHMT2Q96KQ7 1210 aa16.73■□□□□ 0.27
RNF220-215ENST00000487332 CCDC18Q5T9S5 1454 aa16.73■□□□□ 0.27
RNF220-215ENST00000487332 FYCO1Q9BQS8 1478 aa16.73■□□□□ 0.27
RNF220-215ENST00000487332 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
RNF220-215ENST00000487332 ARAP3Q8WWN8 1544 aa16.72■□□□□ 0.27
RNF220-215ENST00000487332 NEO1Q92859 1461 aa16.72■□□□□ 0.27
RNF220-215ENST00000487332 COL17A1Q9UMD9 1497 aaPredicted RBP16.72■□□□□ 0.27
RNF220-215ENST00000487332 ARID3CA6NKF2 412 aa16.71■□□□□ 0.27
RNF220-215ENST00000487332 KCNH8Q96L42 1107 aa16.71■□□□□ 0.27
RNF220-215ENST00000487332 CFAP74Q9C0B2 1584 aa16.7■□□□□ 0.26
RNF220-215ENST00000487332 PLEKHD1A6NEE1 506 aa16.7■□□□□ 0.26
RNF220-215ENST00000487332 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.7■□□□□ 0.26
RNF220-215ENST00000487332 LRRIQ1Q96JM4 1722 aa16.68■□□□□ 0.26
RNF220-215ENST00000487332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
RNF220-215ENST00000487332 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
RNF220-215ENST00000487332 TTC37Q6PGP7 1564 aa16.68■□□□□ 0.26
RNF220-215ENST00000487332 KIF14Q15058 1648 aa16.67■□□□□ 0.26
RNF220-215ENST00000487332 TROQ12816 1431 aaPredicted RBP16.66■□□□□ 0.26
RNF220-215ENST00000487332 CEP162Q5TB80 1403 aa16.64■□□□□ 0.25
RNF220-215ENST00000487332 CDK11AQ9UQ88 783 aaPredicted RBP16.64■□□□□ 0.25
RNF220-215ENST00000487332 FRMPD1Q5SYB0 1578 aa16.6■□□□□ 0.25
RNF220-215ENST00000487332 PLCH2O75038 1416 aa16.6■□□□□ 0.25
RNF220-215ENST00000487332 FANCAO15360 1455 aa16.6■□□□□ 0.25
RNF220-215ENST00000487332 MYO5CQ9NQX4 1742 aa16.59■□□□□ 0.25
RNF220-215ENST00000487332 ZMYM4Q5VZL5 1548 aa16.56■□□□□ 0.24
RNF220-215ENST00000487332 AKNAQ7Z591 1439 aa16.56■□□□□ 0.24
RNF220-215ENST00000487332 ATP1B4Q9UN42 357 aaPredicted RBP16.55■□□□□ 0.24
RNF220-215ENST00000487332 RICTORQ6R327 1708 aa16.55■□□□□ 0.24
RNF220-215ENST00000487332 DENND4BO75064 1496 aaPredicted RBP16.54■□□□□ 0.24
RNF220-215ENST00000487332 PREX2Q70Z35 1606 aa16.54■□□□□ 0.24
RNF220-215ENST00000487332 ARHGEF40Q8TER5 1519 aa16.53■□□□□ 0.24
RNF220-215ENST00000487332 ADGRL1O94910 1474 aa16.51■□□□□ 0.23
RNF220-215ENST00000487332 POGZQ7Z3K3 1410 aa16.51■□□□□ 0.23
RNF220-215ENST00000487332 EHBP1L1Q8N3D4 1523 aa16.5■□□□□ 0.23
RNF220-215ENST00000487332 MAGI2Q86UL8 1455 aa16.5■□□□□ 0.23
RNF220-215ENST00000487332 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms