RNA–Protein interactions for RNA: ENST00000487201.1

RHBDF1-210, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 1,708 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-210ENST00000487201 RIMBP3BA6NNM3 1639 aa37.43■■■■□ 3.58
RHBDF1-210ENST00000487201 RIMBP3Q9UFD9 1639 aa37.43■■■■□ 3.58
RHBDF1-210ENST00000487201 SHROOM2Q13796 1616 aa37.39■■■■□ 3.58
RHBDF1-210ENST00000487201 KIAA0586Q9BVV6 1533 aa37.37■■■■□ 3.57
RHBDF1-210ENST00000487201 ERCC6L2Q5T890 1561 aa37.26■■■■□ 3.56
RHBDF1-210ENST00000487201 JPH4Q96JJ6 628 aa37.26■■■■□ 3.56
RHBDF1-210ENST00000487201 KIF21BO75037 1637 aa37.24■■■■□ 3.55
RHBDF1-210ENST00000487201 IQGAP2Q13576 1575 aa37.23■■■■□ 3.55
RHBDF1-210ENST00000487201 CTTNBP2Q8WZ74 1663 aa37.21■■■■□ 3.55
RHBDF1-210ENST00000487201 ARAP1Q96P48 1450 aa37.18■■■■□ 3.54
RHBDF1-210ENST00000487201 PRG4Q92954 1404 aaPredicted RBP37.17■■■■□ 3.54
RHBDF1-210ENST00000487201 UGGT2Q9NYU1 1516 aa37.05■■■■□ 3.52
RHBDF1-210ENST00000487201 CYB5RLQ6IPT4 315 aa37.04■■■■□ 3.52
RHBDF1-210ENST00000487201 GOLGA3Q08378 1498 aa37■■■■□ 3.51
RHBDF1-210ENST00000487201 DISP1Q96F81 1524 aa36.98■■■■□ 3.51
RHBDF1-210ENST00000487201 EHMT2Q96KQ7 1210 aa36.97■■■■□ 3.51
RHBDF1-210ENST00000487201 CARMIL2Q6F5E8 1435 aa36.9■■■■□ 3.5
RHBDF1-210ENST00000487201 KIAA0556O60303 1618 aa36.88■■■■□ 3.5
RHBDF1-210ENST00000487201 UBTFP17480 764 aaKnown RBP36.84■■■■□ 3.49
RHBDF1-210ENST00000487201 TNIKQ9UKE5 1360 aa36.79■■■■□ 3.48
RHBDF1-210ENST00000487201 SAMD9Q5K651 1589 aa36.77■■■■□ 3.48
RHBDF1-210ENST00000487201 PTPRGP23470 1445 aa36.74■■■■□ 3.47
RHBDF1-210ENST00000487201 RANGAP1P46060 587 aaPredicted RBP36.68■■■■□ 3.46
RHBDF1-210ENST00000487201 TTBK1Q5TCY1 1321 aaPredicted RBP36.67■■■■□ 3.46
RHBDF1-210ENST00000487201 ADCY10Q96PN6 1610 aa36.63■■■■□ 3.46
RHBDF1-210ENST00000487201 P3H3Q8IVL6 736 aa36.62■■■■□ 3.45
RHBDF1-210ENST00000487201 EFCAB5A4FU69 1503 aa36.6■■■■□ 3.45
RHBDF1-210ENST00000487201 FHOD3Q2V2M9 1422 aa36.54■■■■□ 3.44
RHBDF1-210ENST00000487201 LOC105371045A0A1W2PR82 267 aa36.53■■■■□ 3.44
RHBDF1-210ENST00000487201 UACAQ9BZF9 1416 aa36.53■■■■□ 3.44
RHBDF1-210ENST00000487201 ARHGAP35Q9NRY4 1499 aa36.52■■■■□ 3.44
RHBDF1-210ENST00000487201 PLB1Q6P1J6 1458 aa36.5■■■■□ 3.43
RHBDF1-210ENST00000487201 UHRF1BP1LA0JNW5 1464 aa36.49■■■■□ 3.43
RHBDF1-210ENST00000487201 ABCC2Q92887 1545 aa36.48■■■■□ 3.43
RHBDF1-210ENST00000487201 ABCA8O94911 1581 aa36.47■■■■□ 3.43
RHBDF1-210ENST00000487201 CLIP1P30622 1438 aa36.35■■■■□ 3.41
RHBDF1-210ENST00000487201 KDM5BQ9UGL1 1544 aa36.34■■■■□ 3.41
RHBDF1-210ENST00000487201 RAPGEF6Q8TEU7 1601 aa36.32■■■■□ 3.4
RHBDF1-210ENST00000487201 MAPKBP1O60336 1514 aa36.3■■■■□ 3.4
RHBDF1-210ENST00000487201 NPM1P06748 294 aaKnown RBP eCLIP36.3■■■■□ 3.4
RHBDF1-210ENST00000487201 CEP162Q5TB80 1403 aa36.29■■■■□ 3.4
RHBDF1-210ENST00000487201 ZCCHC11Q5TAX3 1644 aaKnown RBP36.29■■■■□ 3.4
RHBDF1-210ENST00000487201 FMN1Q68DA7 1419 aa36.23■■■■□ 3.39
RHBDF1-210ENST00000487201 NUP153P49790 1475 aaKnown RBP36.22■■■■□ 3.39
RHBDF1-210ENST00000487201 ATP10BO94823 1461 aa36.16■■■■□ 3.38
RHBDF1-210ENST00000487201 ASXL2Q76L83 1435 aa36.15■■■■□ 3.38
RHBDF1-210ENST00000487201 ARID3CA6NKF2 412 aa36.14■■■■□ 3.38
RHBDF1-210ENST00000487201 TRHP20396 242 aaPredicted RBP36.11■■■■□ 3.37
RHBDF1-210ENST00000487201 KIF13AQ9H1H9 1805 aa36.11■■■■□ 3.37
RHBDF1-210ENST00000487201 ABCC10Q5T3U5 1492 aa36.08■■■■□ 3.37
RHBDF1-210ENST00000487201 DIP2BQ9P265 1576 aa36.07■■■■□ 3.36
RHBDF1-210ENST00000487201 PCF11O94913 1555 aaKnown RBP36.06■■■■□ 3.36
RHBDF1-210ENST00000487201 HECW1Q76N89 1606 aa36.05■■■■□ 3.36
RHBDF1-210ENST00000487201 LRRIQ1Q96JM4 1722 aa36.02■■■■□ 3.36
RHBDF1-210ENST00000487201 CASKIN1Q8WXD9 1431 aa36.02■■■■□ 3.36
RHBDF1-210ENST00000487201 WDR7Q9Y4E6 1490 aa36.02■■■■□ 3.36
RHBDF1-210ENST00000487201 CDK13Q14004 1512 aaKnown RBP36■■■■□ 3.35
RHBDF1-210ENST00000487201 EPRSP07814 1512 aaKnown RBP35.98■■■■□ 3.35
RHBDF1-210ENST00000487201 FYCO1Q9BQS8 1478 aa35.95■■■■□ 3.35
RHBDF1-210ENST00000487201 ATP1B4Q9UN42 357 aaPredicted RBP35.95■■■■□ 3.35
RHBDF1-210ENST00000487201 FAM69CQ0P6D2 419 aa35.94■■■■□ 3.34
RHBDF1-210ENST00000487201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.91■■■■□ 3.34
RHBDF1-210ENST00000487201 HNRNPUL2Q1KMD3 747 aaKnown RBP35.91■■■■□ 3.34
RHBDF1-210ENST00000487201 GLI2P10070 1586 aa35.9■■■■□ 3.34
RHBDF1-210ENST00000487201 KCNH8Q96L42 1107 aa35.82■■■■□ 3.32
RHBDF1-210ENST00000487201 VPS8Q8N3P4 1428 aa35.82■■■■□ 3.32
RHBDF1-210ENST00000487201 CCDC18Q5T9S5 1454 aa35.82■■■■□ 3.32
RHBDF1-210ENST00000487201 MAP3K4Q9Y6R4 1608 aa35.79■■■■□ 3.32
RHBDF1-210ENST00000487201 PLEKHD1A6NEE1 506 aa35.78■■■■□ 3.32
RHBDF1-210ENST00000487201 TSPOAP1O95153 1857 aa35.77■■■■□ 3.32
RHBDF1-210ENST00000487201 PPRC1Q5VV67 1664 aaKnown RBP35.73■■■■□ 3.31
RHBDF1-210ENST00000487201 MAGI3Q5TCQ9 1506 aa35.71■■■■□ 3.31
RHBDF1-210ENST00000487201 CFAP43Q8NDM7 1665 aa35.7■■■■□ 3.31
RHBDF1-210ENST00000487201 ABCA9Q8IUA7 1624 aa35.7■■■■□ 3.31
RHBDF1-210ENST00000487201 CDK11AQ9UQ88 783 aaPredicted RBP35.68■■■■□ 3.3
RHBDF1-210ENST00000487201 TROQ12816 1431 aaPredicted RBP35.66■■■■□ 3.3
RHBDF1-210ENST00000487201 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.63■■■■□ 3.29
RHBDF1-210ENST00000487201 CD109Q6YHK3 1445 aa35.63■■■■□ 3.29
RHBDF1-210ENST00000487201 KIF14Q15058 1648 aa35.63■■■■□ 3.29
RHBDF1-210ENST00000487201 TTC37Q6PGP7 1564 aa35.6■■■■□ 3.29
RHBDF1-210ENST00000487201 TIAM1Q13009 1591 aa35.55■■■■□ 3.28
RHBDF1-210ENST00000487201 TEX14Q8IWB6 1497 aa35.49■■■■□ 3.27
RHBDF1-210ENST00000487201 MAP3K1Q13233 1512 aa35.47■■■■□ 3.27
RHBDF1-210ENST00000487201 MTUS2Q5JR59 1369 aa35.45■■■■□ 3.27
RHBDF1-210ENST00000487201 EHBP1L1Q8N3D4 1523 aa35.44■■■■□ 3.26
RHBDF1-210ENST00000487201 MYO5CQ9NQX4 1742 aa35.41■■■■□ 3.26
RHBDF1-210ENST00000487201 LRRC9Q6ZRR7 1453 aa35.39■■■■□ 3.26
RHBDF1-210ENST00000487201 PLCH2O75038 1416 aa35.38■■■■□ 3.25
RHBDF1-210ENST00000487201 COL17A1Q9UMD9 1497 aaPredicted RBP35.36■■■■□ 3.25
RHBDF1-210ENST00000487201 KANK4Q5T7N3 995 aaPredicted RBP35.36■■■■□ 3.25
RHBDF1-210ENST00000487201 KDM6BO15054 1643 aa35.36■■■■□ 3.25
RHBDF1-210ENST00000487201 CDC42BPAQ5VT25 1732 aa35.34■■■■□ 3.25
RHBDF1-210ENST00000487201 ARAP3Q8WWN8 1544 aa35.34■■■■□ 3.25
RHBDF1-210ENST00000487201 CDC42BPBQ9Y5S2 1711 aa35.33■■■■□ 3.25
RHBDF1-210ENST00000487201 NEO1Q92859 1461 aa35.33■■■■□ 3.25
RHBDF1-210ENST00000487201 FANCAO15360 1455 aa35.32■■■■□ 3.24
RHBDF1-210ENST00000487201 PREX2Q70Z35 1606 aa35.31■■■■□ 3.24
RHBDF1-210ENST00000487201 SUPT6HQ7KZ85 1726 aaKnown RBP35.29■■■■□ 3.24
RHBDF1-210ENST00000487201 GPATCH8Q9UKJ3 1502 aaKnown RBP35.27■■■■□ 3.24
RHBDF1-210ENST00000487201 CFAP74Q9C0B2 1584 aa35.27■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms