RNA–Protein interactions for RNA: ENST00000486766.2

ATG9A-221, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-221ENST00000486766 KIAA0586Q9BVV6 1533 aa31.42■■■□□ 2.62
ATG9A-221ENST00000486766 IQGAP2Q13576 1575 aa31.39■■■□□ 2.61
ATG9A-221ENST00000486766 SHROOM2Q13796 1616 aa31.38■■■□□ 2.61
ATG9A-221ENST00000486766 RIMBP3CA6NJZ7 1639 aa31.33■■■□□ 2.61
ATG9A-221ENST00000486766 RIMBP3BA6NNM3 1639 aa31.33■■■□□ 2.61
ATG9A-221ENST00000486766 RIMBP3Q9UFD9 1639 aa31.33■■■□□ 2.61
ATG9A-221ENST00000486766 ARHGEF11O15085 1522 aa31.33■■■□□ 2.61
ATG9A-221ENST00000486766 GOLGA3Q08378 1498 aa31.33■■■□□ 2.61
ATG9A-221ENST00000486766 EHMT2Q96KQ7 1210 aa31.31■■■□□ 2.6
ATG9A-221ENST00000486766 JPH4Q96JJ6 628 aa31.27■■■□□ 2.6
ATG9A-221ENST00000486766 PRG4Q92954 1404 aaPredicted RBP31.22■■■□□ 2.59
ATG9A-221ENST00000486766 ERCC6L2Q5T890 1561 aa31.21■■■□□ 2.59
ATG9A-221ENST00000486766 UBTFP17480 764 aaKnown RBP31.19■■■□□ 2.58
ATG9A-221ENST00000486766 UGGT2Q9NYU1 1516 aa31.17■■■□□ 2.58
ATG9A-221ENST00000486766 CARMIL2Q6F5E8 1435 aa31.1■■■□□ 2.57
ATG9A-221ENST00000486766 ARAP1Q96P48 1450 aa31.09■■■□□ 2.57
ATG9A-221ENST00000486766 KIAA0556O60303 1618 aa31.07■■■□□ 2.56
ATG9A-221ENST00000486766 DISP1Q96F81 1524 aa31.06■■■□□ 2.56
ATG9A-221ENST00000486766 RANGAP1P46060 587 aaPredicted RBP31.02■■■□□ 2.56
ATG9A-221ENST00000486766 SAMD9Q5K651 1589 aa30.99■■■□□ 2.55
ATG9A-221ENST00000486766 CYB5RLQ6IPT4 315 aa30.97■■■□□ 2.55
ATG9A-221ENST00000486766 TNIKQ9UKE5 1360 aa30.94■■■□□ 2.54
ATG9A-221ENST00000486766 EFCAB5A4FU69 1503 aa30.93■■■□□ 2.54
ATG9A-221ENST00000486766 TTBK1Q5TCY1 1321 aaPredicted RBP30.91■■■□□ 2.54
ATG9A-221ENST00000486766 LOC105371045A0A1W2PR82 267 aa30.9■■■□□ 2.54
ATG9A-221ENST00000486766 PTPRGP23470 1445 aa30.88■■■□□ 2.53
ATG9A-221ENST00000486766 P3H3Q8IVL6 736 aa30.87■■■□□ 2.53
ATG9A-221ENST00000486766 ARHGAP35Q9NRY4 1499 aa30.8■■■□□ 2.52
ATG9A-221ENST00000486766 FHOD3Q2V2M9 1422 aa30.8■■■□□ 2.52
ATG9A-221ENST00000486766 CLIP1P30622 1438 aa30.75■■■□□ 2.51
ATG9A-221ENST00000486766 ADCY10Q96PN6 1610 aa30.74■■■□□ 2.51
ATG9A-221ENST00000486766 CEP162Q5TB80 1403 aa30.73■■■□□ 2.51
ATG9A-221ENST00000486766 UACAQ9BZF9 1416 aa30.7■■■□□ 2.5
ATG9A-221ENST00000486766 ABCC2Q92887 1545 aa30.68■■■□□ 2.5
ATG9A-221ENST00000486766 PLB1Q6P1J6 1458 aa30.67■■■□□ 2.5
ATG9A-221ENST00000486766 ABCA8O94911 1581 aa30.66■■■□□ 2.5
ATG9A-221ENST00000486766 UHRF1BP1LA0JNW5 1464 aa30.64■■■□□ 2.5
ATG9A-221ENST00000486766 RAPGEF6Q8TEU7 1601 aa30.64■■■□□ 2.5
ATG9A-221ENST00000486766 FMN1Q68DA7 1419 aa30.61■■■□□ 2.49
ATG9A-221ENST00000486766 NPM1P06748 294 aaKnown RBP eCLIP30.55■■■□□ 2.48
ATG9A-221ENST00000486766 ZCCHC11Q5TAX3 1644 aaKnown RBP30.54■■■□□ 2.48
ATG9A-221ENST00000486766 KDM5BQ9UGL1 1544 aa30.49■■■□□ 2.47
ATG9A-221ENST00000486766 HECW1Q76N89 1606 aa30.49■■■□□ 2.47
ATG9A-221ENST00000486766 PCF11O94913 1555 aaKnown RBP30.48■■■□□ 2.47
ATG9A-221ENST00000486766 NUP153P49790 1475 aaKnown RBP30.46■■■□□ 2.47
ATG9A-221ENST00000486766 MAPKBP1O60336 1514 aa30.44■■■□□ 2.46
ATG9A-221ENST00000486766 ARID3CA6NKF2 412 aa30.43■■■□□ 2.46
ATG9A-221ENST00000486766 ATP1B4Q9UN42 357 aaPredicted RBP30.42■■■□□ 2.46
ATG9A-221ENST00000486766 CASKIN1Q8WXD9 1431 aa30.39■■■□□ 2.46
ATG9A-221ENST00000486766 LRRIQ1Q96JM4 1722 aa30.39■■■□□ 2.45
ATG9A-221ENST00000486766 FYCO1Q9BQS8 1478 aa30.38■■■□□ 2.45
ATG9A-221ENST00000486766 ATP10BO94823 1461 aa30.38■■■□□ 2.45
ATG9A-221ENST00000486766 ASXL2Q76L83 1435 aa30.34■■■□□ 2.45
ATG9A-221ENST00000486766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.34■■■□□ 2.45
ATG9A-221ENST00000486766 HNRNPUL2Q1KMD3 747 aaKnown RBP30.34■■■□□ 2.45
ATG9A-221ENST00000486766 CDK13Q14004 1512 aaKnown RBP30.33■■■□□ 2.45
ATG9A-221ENST00000486766 EPRSP07814 1512 aaKnown RBP30.32■■■□□ 2.44
ATG9A-221ENST00000486766 VPS8Q8N3P4 1428 aa30.31■■■□□ 2.44
ATG9A-221ENST00000486766 CCDC18Q5T9S5 1454 aa30.28■■■□□ 2.44
ATG9A-221ENST00000486766 WDR7Q9Y4E6 1490 aa30.27■■■□□ 2.44
ATG9A-221ENST00000486766 KIF13AQ9H1H9 1805 aa30.26■■■□□ 2.44
ATG9A-221ENST00000486766 TRHP20396 242 aaPredicted RBP30.25■■■□□ 2.43
ATG9A-221ENST00000486766 DIP2BQ9P265 1576 aa30.24■■■□□ 2.43
ATG9A-221ENST00000486766 ABCC10Q5T3U5 1492 aa30.22■■■□□ 2.43
ATG9A-221ENST00000486766 PLEKHD1A6NEE1 506 aa30.16■■■□□ 2.42
ATG9A-221ENST00000486766 CFAP43Q8NDM7 1665 aa30.15■■■□□ 2.42
ATG9A-221ENST00000486766 CDK11AQ9UQ88 783 aaPredicted RBP30.14■■■□□ 2.42
ATG9A-221ENST00000486766 FAM69CQ0P6D2 419 aa30.13■■■□□ 2.41
ATG9A-221ENST00000486766 KCNH8Q96L42 1107 aa30.13■■■□□ 2.41
ATG9A-221ENST00000486766 GLI2P10070 1586 aa30.12■■■□□ 2.41
ATG9A-221ENST00000486766 TSPOAP1O95153 1857 aa30.08■■■□□ 2.41
ATG9A-221ENST00000486766 TIAM1Q13009 1591 aa30.07■■■□□ 2.4
ATG9A-221ENST00000486766 TROQ12816 1431 aaPredicted RBP30.05■■■□□ 2.4
ATG9A-221ENST00000486766 MAP3K4Q9Y6R4 1608 aa30.05■■■□□ 2.4
ATG9A-221ENST00000486766 MAGI3Q5TCQ9 1506 aa30.05■■■□□ 2.4
ATG9A-221ENST00000486766 KIF14Q15058 1648 aa30.04■■■□□ 2.4
ATG9A-221ENST00000486766 ABCA9Q8IUA7 1624 aa30.03■■■□□ 2.4
ATG9A-221ENST00000486766 APLP2Q06481 763 aa30■■■□□ 2.39
ATG9A-221ENST00000486766 MAP3K1Q13233 1512 aa29.99■■■□□ 2.39
ATG9A-221ENST00000486766 EHBP1L1Q8N3D4 1523 aa29.99■■■□□ 2.39
ATG9A-221ENST00000486766 MTUS2Q5JR59 1369 aa29.99■■■□□ 2.39
ATG9A-221ENST00000486766 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.97■■■□□ 2.39
ATG9A-221ENST00000486766 TTC37Q6PGP7 1564 aa29.97■■■□□ 2.39
ATG9A-221ENST00000486766 PPRC1Q5VV67 1664 aaKnown RBP29.94■■■□□ 2.38
ATG9A-221ENST00000486766 CD109Q6YHK3 1445 aa29.93■■■□□ 2.38
ATG9A-221ENST00000486766 MYO5CQ9NQX4 1742 aa29.91■■■□□ 2.38
ATG9A-221ENST00000486766 LRRC9Q6ZRR7 1453 aa29.9■■■□□ 2.38
ATG9A-221ENST00000486766 SUPT6HQ7KZ85 1726 aaKnown RBP29.89■■■□□ 2.38
ATG9A-221ENST00000486766 TEX14Q8IWB6 1497 aa29.85■■■□□ 2.37
ATG9A-221ENST00000486766 CDC42BPAQ5VT25 1732 aa29.82■■■□□ 2.36
ATG9A-221ENST00000486766 KANK4Q5T7N3 995 aaPredicted RBP29.81■■■□□ 2.36
ATG9A-221ENST00000486766 PREX2Q70Z35 1606 aa29.79■■■□□ 2.36
ATG9A-221ENST00000486766 CFAP74Q9C0B2 1584 aa29.78■■■□□ 2.36
ATG9A-221ENST00000486766 CDC42BPBQ9Y5S2 1711 aa29.78■■■□□ 2.36
ATG9A-221ENST00000486766 ITSN2Q9NZM3 1697 aa29.76■■■□□ 2.36
ATG9A-221ENST00000486766 NCOA2Q15596 1464 aa29.76■■■□□ 2.35
ATG9A-221ENST00000486766 PLCH2O75038 1416 aa29.75■■■□□ 2.35
ATG9A-221ENST00000486766 ARHGAP5Q13017 1502 aa29.74■■■□□ 2.35
ATG9A-221ENST00000486766 ARAP3Q8WWN8 1544 aa29.74■■■□□ 2.35
ATG9A-221ENST00000486766 CCNB3Q8WWL7 1395 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms