RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
APH1A-208ENST00000486720 IQGAP2Q13576 1575 aa24.03■■□□□ 1.44
APH1A-208ENST00000486720 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
APH1A-208ENST00000486720 JPH4Q96JJ6 628 aa24.02■■□□□ 1.44
APH1A-208ENST00000486720 CTTNBP2Q8WZ74 1663 aa24.01■■□□□ 1.43
APH1A-208ENST00000486720 ARHGEF11O15085 1522 aa23.99■■□□□ 1.43
APH1A-208ENST00000486720 PRG4Q92954 1404 aaPredicted RBP23.94■■□□□ 1.42
APH1A-208ENST00000486720 UBTFP17480 764 aaKnown RBP23.94■■□□□ 1.42
APH1A-208ENST00000486720 RIMBP3CA6NJZ7 1639 aa23.93■■□□□ 1.42
APH1A-208ENST00000486720 RIMBP3BA6NNM3 1639 aa23.93■■□□□ 1.42
APH1A-208ENST00000486720 RIMBP3Q9UFD9 1639 aa23.93■■□□□ 1.42
APH1A-208ENST00000486720 UGGT2Q9NYU1 1516 aa23.91■■□□□ 1.42
APH1A-208ENST00000486720 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
APH1A-208ENST00000486720 CARMIL2Q6F5E8 1435 aa23.89■■□□□ 1.41
APH1A-208ENST00000486720 ERCC6L2Q5T890 1561 aa23.85■■□□□ 1.41
APH1A-208ENST00000486720 DISP1Q96F81 1524 aa23.81■■□□□ 1.4
APH1A-208ENST00000486720 ARAP1Q96P48 1450 aa23.81■■□□□ 1.4
APH1A-208ENST00000486720 TNIKQ9UKE5 1360 aa23.79■■□□□ 1.4
APH1A-208ENST00000486720 KIAA0556O60303 1618 aa23.78■■□□□ 1.4
APH1A-208ENST00000486720 CYB5RLQ6IPT4 315 aa23.74■■□□□ 1.39
APH1A-208ENST00000486720 EFCAB5A4FU69 1503 aa23.74■■□□□ 1.39
APH1A-208ENST00000486720 SAMD9Q5K651 1589 aa23.74■■□□□ 1.39
APH1A-208ENST00000486720 RANGAP1P46060 587 aaPredicted RBP23.72■■□□□ 1.39
APH1A-208ENST00000486720 PTPRGP23470 1445 aa23.71■■□□□ 1.39
APH1A-208ENST00000486720 LOC105371045A0A1W2PR82 267 aa23.69■■□□□ 1.38
APH1A-208ENST00000486720 P3H3Q8IVL6 736 aa23.65■■□□□ 1.38
APH1A-208ENST00000486720 TTBK1Q5TCY1 1321 aaPredicted RBP23.63■■□□□ 1.37
APH1A-208ENST00000486720 ARHGAP35Q9NRY4 1499 aa23.62■■□□□ 1.37
APH1A-208ENST00000486720 CLIP1P30622 1438 aa23.61■■□□□ 1.37
APH1A-208ENST00000486720 FHOD3Q2V2M9 1422 aa23.59■■□□□ 1.37
APH1A-208ENST00000486720 CEP162Q5TB80 1403 aa23.57■■□□□ 1.36
APH1A-208ENST00000486720 UACAQ9BZF9 1416 aa23.57■■□□□ 1.36
APH1A-208ENST00000486720 UHRF1BP1LA0JNW5 1464 aa23.54■■□□□ 1.36
APH1A-208ENST00000486720 FMN1Q68DA7 1419 aa23.52■■□□□ 1.36
APH1A-208ENST00000486720 ABCC2Q92887 1545 aa23.52■■□□□ 1.36
APH1A-208ENST00000486720 PLB1Q6P1J6 1458 aa23.5■■□□□ 1.35
APH1A-208ENST00000486720 ABCA8O94911 1581 aa23.5■■□□□ 1.35
APH1A-208ENST00000486720 ADCY10Q96PN6 1610 aa23.5■■□□□ 1.35
APH1A-208ENST00000486720 NPM1P06748 294 aaKnown RBP eCLIP23.48■■□□□ 1.35
APH1A-208ENST00000486720 RAPGEF6Q8TEU7 1601 aa23.44■■□□□ 1.34
APH1A-208ENST00000486720 KDM5BQ9UGL1 1544 aa23.41■■□□□ 1.34
APH1A-208ENST00000486720 NUP153P49790 1475 aaKnown RBP23.36■■□□□ 1.33
APH1A-208ENST00000486720 HECW1Q76N89 1606 aa23.35■■□□□ 1.33
APH1A-208ENST00000486720 CASKIN1Q8WXD9 1431 aa23.34■■□□□ 1.33
APH1A-208ENST00000486720 MAPKBP1O60336 1514 aa23.34■■□□□ 1.33
APH1A-208ENST00000486720 ZCCHC11Q5TAX3 1644 aaKnown RBP23.33■■□□□ 1.33
APH1A-208ENST00000486720 FYCO1Q9BQS8 1478 aa23.31■■□□□ 1.32
APH1A-208ENST00000486720 ATP1B4Q9UN42 357 aaPredicted RBP23.31■■□□□ 1.32
APH1A-208ENST00000486720 PCF11O94913 1555 aaKnown RBP23.31■■□□□ 1.32
APH1A-208ENST00000486720 ATP10BO94823 1461 aa23.3■■□□□ 1.32
APH1A-208ENST00000486720 VPS8Q8N3P4 1428 aa23.28■■□□□ 1.32
APH1A-208ENST00000486720 ARID3CA6NKF2 412 aa23.27■■□□□ 1.32
APH1A-208ENST00000486720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.27■■□□□ 1.32
APH1A-208ENST00000486720 HNRNPUL2Q1KMD3 747 aaKnown RBP23.27■■□□□ 1.32
APH1A-208ENST00000486720 ASXL2Q76L83 1435 aa23.26■■□□□ 1.31
APH1A-208ENST00000486720 EPRSP07814 1512 aaKnown RBP23.26■■□□□ 1.31
APH1A-208ENST00000486720 CCDC18Q5T9S5 1454 aa23.24■■□□□ 1.31
APH1A-208ENST00000486720 WDR7Q9Y4E6 1490 aa23.22■■□□□ 1.31
APH1A-208ENST00000486720 CDK13Q14004 1512 aaKnown RBP23.21■■□□□ 1.31
APH1A-208ENST00000486720 CDK11AQ9UQ88 783 aaPredicted RBP23.2■■□□□ 1.3
APH1A-208ENST00000486720 ABCC10Q5T3U5 1492 aa23.18■■□□□ 1.3
APH1A-208ENST00000486720 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
APH1A-208ENST00000486720 TRHP20396 242 aaPredicted RBP23.17■■□□□ 1.3
APH1A-208ENST00000486720 LRRIQ1Q96JM4 1722 aa23.14■■□□□ 1.3
APH1A-208ENST00000486720 DIP2BQ9P265 1576 aa23.14■■□□□ 1.29
APH1A-208ENST00000486720 FAM69CQ0P6D2 419 aa23.12■■□□□ 1.29
APH1A-208ENST00000486720 GLI2P10070 1586 aa23.1■■□□□ 1.29
APH1A-208ENST00000486720 KCNH8Q96L42 1107 aa23.09■■□□□ 1.29
APH1A-208ENST00000486720 TROQ12816 1431 aaPredicted RBP23.08■■□□□ 1.28
APH1A-208ENST00000486720 APLP2Q06481 763 aa23.07■■□□□ 1.28
APH1A-208ENST00000486720 MAP3K1Q13233 1512 aa23.06■■□□□ 1.28
APH1A-208ENST00000486720 KIF13AQ9H1H9 1805 aa23.05■■□□□ 1.28
APH1A-208ENST00000486720 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
APH1A-208ENST00000486720 CFAP43Q8NDM7 1665 aa23.04■■□□□ 1.28
APH1A-208ENST00000486720 MTUS2Q5JR59 1369 aa23.02■■□□□ 1.28
APH1A-208ENST00000486720 KIF14Q15058 1648 aa23■■□□□ 1.27
APH1A-208ENST00000486720 MAGI3Q5TCQ9 1506 aa22.99■■□□□ 1.27
APH1A-208ENST00000486720 EHBP1L1Q8N3D4 1523 aa22.99■■□□□ 1.27
APH1A-208ENST00000486720 ABCA9Q8IUA7 1624 aa22.99■■□□□ 1.27
APH1A-208ENST00000486720 MAP3K4Q9Y6R4 1608 aa22.97■■□□□ 1.27
APH1A-208ENST00000486720 CD109Q6YHK3 1445 aa22.97■■□□□ 1.27
APH1A-208ENST00000486720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.95■■□□□ 1.26
APH1A-208ENST00000486720 LRRC9Q6ZRR7 1453 aa22.94■■□□□ 1.26
APH1A-208ENST00000486720 TTC37Q6PGP7 1564 aa22.91■■□□□ 1.26
APH1A-208ENST00000486720 TEX14Q8IWB6 1497 aa22.91■■□□□ 1.26
APH1A-208ENST00000486720 KANK4Q5T7N3 995 aaPredicted RBP22.87■■□□□ 1.25
APH1A-208ENST00000486720 SUPT6HQ7KZ85 1726 aaKnown RBP22.87■■□□□ 1.25
APH1A-208ENST00000486720 TSPOAP1O95153 1857 aa22.86■■□□□ 1.25
APH1A-208ENST00000486720 PLCH2O75038 1416 aa22.85■■□□□ 1.25
APH1A-208ENST00000486720 PPRC1Q5VV67 1664 aaKnown RBP22.84■■□□□ 1.25
APH1A-208ENST00000486720 ARAP3Q8WWN8 1544 aa22.84■■□□□ 1.25
APH1A-208ENST00000486720 MYO5CQ9NQX4 1742 aa22.83■■□□□ 1.25
APH1A-208ENST00000486720 CCNB3Q8WWL7 1395 aa22.83■■□□□ 1.25
APH1A-208ENST00000486720 NCOA2Q15596 1464 aa22.83■■□□□ 1.25
APH1A-208ENST00000486720 PHLDB1Q86UU1 1377 aa22.81■■□□□ 1.24
APH1A-208ENST00000486720 NEO1Q92859 1461 aa22.8■■□□□ 1.24
APH1A-208ENST00000486720 CFAP74Q9C0B2 1584 aa22.8■■□□□ 1.24
APH1A-208ENST00000486720 EFCAB2Q5VUJ9 269 aa22.79■■□□□ 1.24
APH1A-208ENST00000486720 FANCAO15360 1455 aa22.79■■□□□ 1.24
APH1A-208ENST00000486720 PREX2Q70Z35 1606 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms