RNA–Protein interactions for RNA: ENST00000486715.5

GFM1-210, Transcript of G elongation factor mitochondrial 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFM1, Length 3,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-210ENST00000486715 B4GALNT3Q6L9W6 998 aa14.19□□□□□ -0.14
GFM1-210ENST00000486715 SIN3AQ96ST3 1273 aa14.17□□□□□ -0.14
GFM1-210ENST00000486715 DHX57Q6P158 1386 aaKnown RBP14.17□□□□□ -0.14
GFM1-210ENST00000486715 IL27Q8NEV9 243 aa14.16□□□□□ -0.14
GFM1-210ENST00000486715 PRDM2Q13029 1718 aa14.14□□□□□ -0.15
GFM1-210ENST00000486715 NPM2Q86SE8 214 aaKnown RBP14.14□□□□□ -0.15
GFM1-210ENST00000486715 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
GFM1-210ENST00000486715 ATP1B4Q9UN42 357 aaPredicted RBP14.12□□□□□ -0.15
GFM1-210ENST00000486715 CLIP1P30622 1438 aa14.12□□□□□ -0.15
GFM1-210ENST00000486715 FANCIQ9NVI1 1328 aa14.12□□□□□ -0.15
GFM1-210ENST00000486715 KIF21AQ7Z4S6 1674 aa14.11□□□□□ -0.15
GFM1-210ENST00000486715 NOP58Q9Y2X3 529 aaKnown RBP14.11□□□□□ -0.15
GFM1-210ENST00000486715 KANK4Q5T7N3 995 aaPredicted RBP14.08□□□□□ -0.15
GFM1-210ENST00000486715 DNAJC5Q9H3Z4 198 aa14.07□□□□□ -0.16
GFM1-210ENST00000486715 WDR62O43379 1518 aa14.07□□□□□ -0.16
GFM1-210ENST00000486715 MYT1LQ9UL68 1186 aa14.06□□□□□ -0.16
GFM1-210ENST00000486715 FAM50AQ14320 339 aaKnown RBP14.06□□□□□ -0.16
GFM1-210ENST00000486715 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
GFM1-210ENST00000486715 ERCC6Q03468 1493 aa14.06□□□□□ -0.16
GFM1-210ENST00000486715 LAS1LQ9Y4W2 734 aaKnown RBP14.04□□□□□ -0.16
GFM1-210ENST00000486715 WIZO95785 1651 aa14.03□□□□□ -0.16
GFM1-210ENST00000486715 GOLGA3Q08378 1498 aa14.03□□□□□ -0.16
GFM1-210ENST00000486715 NESP48681 1621 aa14.03□□□□□ -0.16
GFM1-210ENST00000486715 PDS5BQ9NTI5 1447 aa14.03□□□□□ -0.16
GFM1-210ENST00000486715 ANP32AP39687 249 aaKnown RBP14.02□□□□□ -0.17
GFM1-210ENST00000486715 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.17
GFM1-210ENST00000486715 ZBTB47Q9UFB7 747 aaPredicted RBP14.02□□□□□ -0.17
GFM1-210ENST00000486715 CADPSQ9ULU8 1353 aa13.98□□□□□ -0.17
GFM1-210ENST00000486715 PPP4R2Q9NY27 417 aa13.98□□□□□ -0.17
GFM1-210ENST00000486715 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
GFM1-210ENST00000486715 POLR3GLQ9BT43 218 aa13.96□□□□□ -0.17
GFM1-210ENST00000486715 CFTRP13569 1480 aa13.95□□□□□ -0.18
GFM1-210ENST00000486715 VPS8Q8N3P4 1428 aa13.95□□□□□ -0.18
GFM1-210ENST00000486715 PPP1R15AO75807 674 aaPredicted RBP13.93□□□□□ -0.18
GFM1-210ENST00000486715 NEFMP07197 916 aa13.92□□□□□ -0.18
GFM1-210ENST00000486715 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
GFM1-210ENST00000486715 RAB3GAP2Q9H2M9 1393 aa13.88□□□□□ -0.19
GFM1-210ENST00000486715 MRS2Q9HD23 443 aa13.86□□□□□ -0.19
GFM1-210ENST00000486715 TIMELESSQ9UNS1 1208 aa13.86□□□□□ -0.19
GFM1-210ENST00000486715 CCDC184Q52MB2 194 aa13.85□□□□□ -0.19
GFM1-210ENST00000486715 IPO9Q96P70 1041 aaKnown RBP13.85□□□□□ -0.19
GFM1-210ENST00000486715 BRPF3Q9ULD4 1205 aa13.85□□□□□ -0.19
GFM1-210ENST00000486715 ERICH6BQ5W0A0 696 aa13.84□□□□□ -0.19
GFM1-210ENST00000486715 CEP164Q9UPV0 1460 aa13.84□□□□□ -0.19
GFM1-210ENST00000486715 P3H3Q8IVL6 736 aa13.83□□□□□ -0.2
GFM1-210ENST00000486715 EEA1Q15075 1411 aa13.82□□□□□ -0.2
GFM1-210ENST00000486715 CCNB3Q8WWL7 1395 aa13.82□□□□□ -0.2
GFM1-210ENST00000486715 TONSLQ96HA7 1378 aa13.81□□□□□ -0.2
GFM1-210ENST00000486715 RAPGEF2Q9Y4G8 1499 aa13.81□□□□□ -0.2
GFM1-210ENST00000486715 WDR97A6NE52 1622 aa13.8□□□□□ -0.2
GFM1-210ENST00000486715 FANCD2Q9BXW9 1451 aa13.8□□□□□ -0.2
GFM1-210ENST00000486715 ARXQ96QS3 562 aa13.78□□□□□ -0.2
GFM1-210ENST00000486715 DAXXQ9UER7 740 aaPredicted RBP13.75□□□□□ -0.21
GFM1-210ENST00000486715 SLC4A3P48751 1232 aa13.74□□□□□ -0.21
GFM1-210ENST00000486715 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
GFM1-210ENST00000486715 UBE2Q2Q8WVN8 375 aa13.73□□□□□ -0.21
GFM1-210ENST00000486715 KIF21BO75037 1637 aa13.7□□□□□ -0.22
GFM1-210ENST00000486715 SETD5Q9C0A6 1442 aa13.68□□□□□ -0.22
GFM1-210ENST00000486715 HSPA5P11021 654 aaKnown RBP13.67□□□□□ -0.22
GFM1-210ENST00000486715 DNMBPQ6XZF7 1577 aa13.67□□□□□ -0.22
GFM1-210ENST00000486715 SKAP1Q86WV1 359 aa13.67□□□□□ -0.22
GFM1-210ENST00000486715 IFT140Q96RY7 1462 aa13.66□□□□□ -0.22
GFM1-210ENST00000486715 AKNAQ7Z591 1439 aa13.66□□□□□ -0.22
GFM1-210ENST00000486715 ZNF326Q5BKZ1 582 aaKnown RBP13.64□□□□□ -0.23
GFM1-210ENST00000486715 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
GFM1-210ENST00000486715 PKNOX2Q96KN3 472 aa13.61□□□□□ -0.23
GFM1-210ENST00000486715 CHIC2Q9UKJ5 165 aa13.61□□□□□ -0.23
GFM1-210ENST00000486715 WASHC2AQ641Q2 1341 aa13.61□□□□□ -0.23
GFM1-210ENST00000486715 MAPKBP1O60336 1514 aa13.61□□□□□ -0.23
GFM1-210ENST00000486715 TOPBP1Q92547 1522 aa13.61□□□□□ -0.23
GFM1-210ENST00000486715 FRAT1Q92837 279 aaPredicted RBP13.6□□□□□ -0.23
GFM1-210ENST00000486715 EIF4G2P78344 907 aaKnown RBP eCLIP13.6□□□□□ -0.23
GFM1-210ENST00000486715 GSE1Q14687 1217 aa13.6□□□□□ -0.23
GFM1-210ENST00000486715 ARID4BQ4LE39 1312 aaPredicted RBP13.59□□□□□ -0.23
GFM1-210ENST00000486715 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
GFM1-210ENST00000486715 PDE4AP27815 886 aa13.59□□□□□ -0.23
GFM1-210ENST00000486715 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
GFM1-210ENST00000486715 PRKRIP1Q9H875 184 aaPredicted RBP13.58□□□□□ -0.24
GFM1-210ENST00000486715 RRBP1Q9P2E9 1410 aaKnown RBP13.57□□□□□ -0.24
GFM1-210ENST00000486715 EXOC6Q8TAG9 804 aa13.57□□□□□ -0.24
GFM1-210ENST00000486715 FOXD1Q16676 465 aa13.56□□□□□ -0.24
GFM1-210ENST00000486715 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
GFM1-210ENST00000486715 EIF4G3O43432 1585 aaKnown RBP13.55□□□□□ -0.24
GFM1-210ENST00000486715 RRP7BPQ9NSQ0 103 aa13.55□□□□□ -0.24
GFM1-210ENST00000486715 ZBED9Q6R2W3 1325 aa13.55□□□□□ -0.24
GFM1-210ENST00000486715 NFKBIBQ15653 356 aa13.54□□□□□ -0.24
GFM1-210ENST00000486715 C11orf95C9JLR9 678 aaPredicted RBP13.53□□□□□ -0.24
GFM1-210ENST00000486715 NUDCQ9Y266 331 aa13.52□□□□□ -0.24
GFM1-210ENST00000486715 TMC1Q8TDI8 760 aa13.52□□□□□ -0.25
GFM1-210ENST00000486715 NAP1L5Q96NT1 182 aaPredicted RBP13.51□□□□□ -0.25
GFM1-210ENST00000486715 PHLDB1Q86UU1 1377 aa13.5□□□□□ -0.25
GFM1-210ENST00000486715 PLIN1O60240 522 aa13.5□□□□□ -0.25
GFM1-210ENST00000486715 USP35Q9P2H5 1018 aa13.49□□□□□ -0.25
GFM1-210ENST00000486715 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
GFM1-210ENST00000486715 ARID3CA6NKF2 412 aa13.48□□□□□ -0.25
GFM1-210ENST00000486715 GLIPR1L2Q4G1C9 344 aa13.48□□□□□ -0.25
GFM1-210ENST00000486715 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
GFM1-210ENST00000486715 CHD1O14646 1710 aa13.46□□□□□ -0.25
GFM1-210ENST00000486715 RIMBP3CA6NJZ7 1639 aa13.46□□□□□ -0.25
GFM1-210ENST00000486715 RIMBP3BA6NNM3 1639 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms