RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 PRG4Q92954 1404 aaPredicted RBP31.25■■■□□ 2.59
CLDN11-206ENST00000486429 KIAA0586Q9BVV6 1533 aa31.24■■■□□ 2.59
CLDN11-206ENST00000486429 JPH4Q96JJ6 628 aa31.22■■■□□ 2.59
CLDN11-206ENST00000486429 RAPGEF2Q9Y4G8 1499 aa31.11■■■□□ 2.57
CLDN11-206ENST00000486429 IQGAP2Q13576 1575 aa31.07■■■□□ 2.56
CLDN11-206ENST00000486429 TRHP20396 242 aaPredicted RBP31.06■■■□□ 2.56
CLDN11-206ENST00000486429 CARMIL2Q6F5E8 1435 aa30.93■■■□□ 2.54
CLDN11-206ENST00000486429 PRXQ9BXM0 1461 aa30.93■■■□□ 2.54
CLDN11-206ENST00000486429 CTTNBP2Q8WZ74 1663 aa30.9■■■□□ 2.54
CLDN11-206ENST00000486429 UGGT2Q9NYU1 1516 aa30.87■■■□□ 2.53
CLDN11-206ENST00000486429 ADCY10Q96PN6 1610 aa30.87■■■□□ 2.53
CLDN11-206ENST00000486429 DISP1Q96F81 1524 aa30.83■■■□□ 2.53
CLDN11-206ENST00000486429 EEA1Q15075 1411 aa30.83■■■□□ 2.53
CLDN11-206ENST00000486429 TNIKQ9UKE5 1360 aa30.83■■■□□ 2.53
CLDN11-206ENST00000486429 PTPRGP23470 1445 aa30.82■■■□□ 2.52
CLDN11-206ENST00000486429 KIAA0556O60303 1618 aa30.79■■■□□ 2.52
CLDN11-206ENST00000486429 CSRNP3Q8WYN3 585 aa30.76■■■□□ 2.51
CLDN11-206ENST00000486429 MAPKBP1O60336 1514 aa30.74■■■□□ 2.51
CLDN11-206ENST00000486429 TTBK1Q5TCY1 1321 aaPredicted RBP30.73■■■□□ 2.51
CLDN11-206ENST00000486429 NPM1P06748 294 aaKnown RBP eCLIP30.73■■■□□ 2.51
CLDN11-206ENST00000486429 GOLGA3Q08378 1498 aa30.68■■■□□ 2.5
CLDN11-206ENST00000486429 KIF13AQ9H1H9 1805 aa30.66■■■□□ 2.5
CLDN11-206ENST00000486429 CHIC1Q5VXU3 224 aa30.65■■■□□ 2.5
CLDN11-206ENST00000486429 UHRF1BP1LA0JNW5 1464 aa30.63■■■□□ 2.49
CLDN11-206ENST00000486429 ABCC2Q92887 1545 aa30.63■■■□□ 2.49
CLDN11-206ENST00000486429 UACAQ9BZF9 1416 aa30.63■■■□□ 2.49
CLDN11-206ENST00000486429 ABCC10Q5T3U5 1492 aa30.6■■■□□ 2.49
CLDN11-206ENST00000486429 DIP2BQ9P265 1576 aa30.59■■■□□ 2.49
CLDN11-206ENST00000486429 FAM9AQ8IZU1 332 aaPredicted RBP30.59■■■□□ 2.49
CLDN11-206ENST00000486429 KIF21BO75037 1637 aa30.56■■■□□ 2.48
CLDN11-206ENST00000486429 FAM69CQ0P6D2 419 aa30.49■■■□□ 2.47
CLDN11-206ENST00000486429 KDM5BQ9UGL1 1544 aa30.48■■■□□ 2.47
CLDN11-206ENST00000486429 SAMD9Q5K651 1589 aa30.47■■■□□ 2.47
CLDN11-206ENST00000486429 PLB1Q6P1J6 1458 aa30.46■■■□□ 2.47
CLDN11-206ENST00000486429 ZCCHC11Q5TAX3 1644 aaKnown RBP30.46■■■□□ 2.47
CLDN11-206ENST00000486429 ASXL2Q76L83 1435 aa30.46■■■□□ 2.47
CLDN11-206ENST00000486429 ABCA8O94911 1581 aa30.45■■■□□ 2.46
CLDN11-206ENST00000486429 P3H3Q8IVL6 736 aa30.35■■■□□ 2.45
CLDN11-206ENST00000486429 GLI2P10070 1586 aa30.33■■■□□ 2.45
CLDN11-206ENST00000486429 EFCAB5A4FU69 1503 aa30.3■■■□□ 2.44
CLDN11-206ENST00000486429 TSPOAP1O95153 1857 aa30.29■■■□□ 2.44
CLDN11-206ENST00000486429 EPRSP07814 1512 aaKnown RBP30.28■■■□□ 2.44
CLDN11-206ENST00000486429 WDR7Q9Y4E6 1490 aa30.28■■■□□ 2.44
CLDN11-206ENST00000486429 RANGAP1P46060 587 aaPredicted RBP30.28■■■□□ 2.44
CLDN11-206ENST00000486429 FHOD3Q2V2M9 1422 aa30.24■■■□□ 2.43
CLDN11-206ENST00000486429 RAPGEF6Q8TEU7 1601 aa30.24■■■□□ 2.43
CLDN11-206ENST00000486429 EHMT2Q96KQ7 1210 aa30.22■■■□□ 2.43
CLDN11-206ENST00000486429 UBTFP17480 764 aaKnown RBP30.21■■■□□ 2.43
CLDN11-206ENST00000486429 MAP3K4Q9Y6R4 1608 aa30.2■■■□□ 2.43
CLDN11-206ENST00000486429 PPRC1Q5VV67 1664 aaKnown RBP30.19■■■□□ 2.42
CLDN11-206ENST00000486429 KDM6BO15054 1643 aa30.18■■■□□ 2.42
CLDN11-206ENST00000486429 ATP10BO94823 1461 aa30.13■■■□□ 2.41
CLDN11-206ENST00000486429 ARID3CA6NKF2 412 aa30.12■■■□□ 2.41
CLDN11-206ENST00000486429 NUP153P49790 1475 aaKnown RBP30.1■■■□□ 2.41
CLDN11-206ENST00000486429 TEX14Q8IWB6 1497 aa30.08■■■□□ 2.41
CLDN11-206ENST00000486429 CFAP43Q8NDM7 1665 aa30.07■■■□□ 2.41
CLDN11-206ENST00000486429 ARHGAP35Q9NRY4 1499 aa30.04■■■□□ 2.4
CLDN11-206ENST00000486429 KCNH8Q96L42 1107 aa30.03■■■□□ 2.4
CLDN11-206ENST00000486429 CD109Q6YHK3 1445 aa29.98■■■□□ 2.39
CLDN11-206ENST00000486429 FMN1Q68DA7 1419 aa29.97■■■□□ 2.39
CLDN11-206ENST00000486429 MAGI3Q5TCQ9 1506 aa29.97■■■□□ 2.39
CLDN11-206ENST00000486429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.97■■■□□ 2.39
CLDN11-206ENST00000486429 HNRNPUL2Q1KMD3 747 aaKnown RBP29.97■■■□□ 2.39
CLDN11-206ENST00000486429 ABCA9Q8IUA7 1624 aa29.93■■■□□ 2.38
CLDN11-206ENST00000486429 HECW1Q76N89 1606 aa29.93■■■□□ 2.38
CLDN11-206ENST00000486429 COL17A1Q9UMD9 1497 aaPredicted RBP29.87■■■□□ 2.37
CLDN11-206ENST00000486429 CDK13Q14004 1512 aaKnown RBP29.87■■■□□ 2.37
CLDN11-206ENST00000486429 PLEKHD1A6NEE1 506 aa29.82■■■□□ 2.36
CLDN11-206ENST00000486429 ATP1B4Q9UN42 357 aaPredicted RBP29.77■■■□□ 2.36
CLDN11-206ENST00000486429 CLIP1P30622 1438 aa29.77■■■□□ 2.36
CLDN11-206ENST00000486429 PCF11O94913 1555 aaKnown RBP29.76■■■□□ 2.35
CLDN11-206ENST00000486429 AEBP2Q6ZN18 517 aaPredicted RBP29.73■■■□□ 2.35
CLDN11-206ENST00000486429 TTC37Q6PGP7 1564 aa29.73■■■□□ 2.35
CLDN11-206ENST00000486429 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.72■■■□□ 2.35
CLDN11-206ENST00000486429 ARAP3Q8WWN8 1544 aa29.71■■■□□ 2.35
CLDN11-206ENST00000486429 NEO1Q92859 1461 aa29.71■■■□□ 2.35
CLDN11-206ENST00000486429 PHLDB1Q86UU1 1377 aa29.7■■■□□ 2.35
CLDN11-206ENST00000486429 CASKIN1Q8WXD9 1431 aa29.7■■■□□ 2.34
CLDN11-206ENST00000486429 LRRIQ1Q96JM4 1722 aa29.69■■■□□ 2.34
CLDN11-206ENST00000486429 CFAP74Q9C0B2 1584 aa29.65■■■□□ 2.34
CLDN11-206ENST00000486429 CDK11AQ9UQ88 783 aaPredicted RBP29.65■■■□□ 2.34
CLDN11-206ENST00000486429 CCDC18Q5T9S5 1454 aa29.65■■■□□ 2.34
CLDN11-206ENST00000486429 FYCO1Q9BQS8 1478 aa29.65■■■□□ 2.34
CLDN11-206ENST00000486429 KIF14Q15058 1648 aa29.63■■■□□ 2.33
CLDN11-206ENST00000486429 TROQ12816 1431 aaPredicted RBP29.61■■■□□ 2.33
CLDN11-206ENST00000486429 FANCAO15360 1455 aa29.6■■■□□ 2.33
CLDN11-206ENST00000486429 CEP162Q5TB80 1403 aa29.57■■■□□ 2.32
CLDN11-206ENST00000486429 MYO5CQ9NQX4 1742 aa29.55■■■□□ 2.32
CLDN11-206ENST00000486429 FRMPD1Q5SYB0 1578 aa29.55■■■□□ 2.32
CLDN11-206ENST00000486429 AKNAQ7Z591 1439 aa29.53■■■□□ 2.32
CLDN11-206ENST00000486429 ADGRL1O94910 1474 aa29.52■■■□□ 2.32
CLDN11-206ENST00000486429 PLCH2O75038 1416 aa29.52■■■□□ 2.32
CLDN11-206ENST00000486429 KDM4FA0A1W2PPD8 638 aa29.51■■■□□ 2.31
CLDN11-206ENST00000486429 DENND4BO75064 1496 aaPredicted RBP29.49■■■□□ 2.31
CLDN11-206ENST00000486429 RAPGEF3O95398 923 aa29.48■■■□□ 2.31
CLDN11-206ENST00000486429 RICTORQ6R327 1708 aa29.47■■■□□ 2.31
CLDN11-206ENST00000486429 ARHGAP5Q13017 1502 aa29.41■■■□□ 2.3
CLDN11-206ENST00000486429 ARHGEF40Q8TER5 1519 aa29.4■■■□□ 2.3
CLDN11-206ENST00000486429 ZMYM4Q5VZL5 1548 aa29.4■■■□□ 2.3
CLDN11-206ENST00000486429 PREX2Q70Z35 1606 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms