RNA–Protein interactions for RNA: ENST00000486310.5

ARF4-204, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 1,601 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-204ENST00000486310 SNAPC4Q5SXM2 1469 aa11.31□□□□□ -0.6
ARF4-204ENST00000486310 SYNJ2O15056 1496 aa11.27□□□□□ -0.61
ARF4-204ENST00000486310 CHMP7Q8WUX9 453 aaPredicted RBP11.25□□□□□ -0.61
ARF4-204ENST00000486310 CTTNBP2Q8WZ74 1663 aa11.24□□□□□ -0.61
ARF4-204ENST00000486310 GRIN2AQ12879 1464 aa11.23□□□□□ -0.61
ARF4-204ENST00000486310 FBLN2P98095 1184 aa11.22□□□□□ -0.61
ARF4-204ENST00000486310 CEP162Q5TB80 1403 aa11.22□□□□□ -0.61
ARF4-204ENST00000486310 CLIP1P30622 1438 aa11.19□□□□□ -0.62
ARF4-204ENST00000486310 CHD1O14646 1710 aa11.18□□□□□ -0.62
ARF4-204ENST00000486310 RANGAP1P46060 587 aaPredicted RBP11.17□□□□□ -0.62
ARF4-204ENST00000486310 PPP6R1Q9UPN7 881 aa11.17□□□□□ -0.62
ARF4-204ENST00000486310 IQGAP2Q13576 1575 aa11.16□□□□□ -0.62
ARF4-204ENST00000486310 KIAA0586Q9BVV6 1533 aa11.16□□□□□ -0.62
ARF4-204ENST00000486310 NUP160Q12769 1436 aa11.16□□□□□ -0.62
ARF4-204ENST00000486310 CEP170Q5SW79 1584 aa11.15□□□□□ -0.62
ARF4-204ENST00000486310 EFCAB5A4FU69 1503 aa11.13□□□□□ -0.63
ARF4-204ENST00000486310 ARHGAP35Q9NRY4 1499 aa11.11□□□□□ -0.63
ARF4-204ENST00000486310 UGGT2Q9NYU1 1516 aa11.1□□□□□ -0.63
ARF4-204ENST00000486310 SAMD9Q5K651 1589 aa11.09□□□□□ -0.63
ARF4-204ENST00000486310 ARAP1Q96P48 1450 aa11.08□□□□□ -0.64
ARF4-204ENST00000486310 VPS8Q8N3P4 1428 aa11.07□□□□□ -0.64
ARF4-204ENST00000486310 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
ARF4-204ENST00000486310 ADRA2BP18089 450 aa11.06□□□□□ -0.64
ARF4-204ENST00000486310 CARMIL2Q6F5E8 1435 aa11.06□□□□□ -0.64
ARF4-204ENST00000486310 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
ARF4-204ENST00000486310 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
ARF4-204ENST00000486310 CLASP1Q7Z460 1538 aa11.05□□□□□ -0.64
ARF4-204ENST00000486310 KIAA0556O60303 1618 aa11.04□□□□□ -0.64
ARF4-204ENST00000486310 FHOD3Q2V2M9 1422 aa11.04□□□□□ -0.64
ARF4-204ENST00000486310 FMN1Q68DA7 1419 aa11.04□□□□□ -0.64
ARF4-204ENST00000486310 DISP1Q96F81 1524 aa11.03□□□□□ -0.64
ARF4-204ENST00000486310 SHROOM2Q13796 1616 aa11.03□□□□□ -0.64
ARF4-204ENST00000486310 APLP2Q06481 763 aa11.02□□□□□ -0.65
ARF4-204ENST00000486310 PRG4Q92954 1404 aaPredicted RBP11.01□□□□□ -0.65
ARF4-204ENST00000486310 FYCO1Q9BQS8 1478 aa10.97□□□□□ -0.65
ARF4-204ENST00000486310 CASKIN1Q8WXD9 1431 aa10.97□□□□□ -0.65
ARF4-204ENST00000486310 PCF11O94913 1555 aaKnown RBP10.96□□□□□ -0.66
ARF4-204ENST00000486310 ATP1B4Q9UN42 357 aaPredicted RBP10.95□□□□□ -0.66
ARF4-204ENST00000486310 TTBK1Q5TCY1 1321 aaPredicted RBP10.94□□□□□ -0.66
ARF4-204ENST00000486310 HECW1Q76N89 1606 aa10.94□□□□□ -0.66
ARF4-204ENST00000486310 PTPRGP23470 1445 aa10.94□□□□□ -0.66
ARF4-204ENST00000486310 MAP3K1Q13233 1512 aa10.92□□□□□ -0.66
ARF4-204ENST00000486310 RAPGEF6Q8TEU7 1601 aa10.92□□□□□ -0.66
ARF4-204ENST00000486310 ERCC6L2Q5T890 1561 aa10.91□□□□□ -0.66
ARF4-204ENST00000486310 CCDC18Q5T9S5 1454 aa10.91□□□□□ -0.66
ARF4-204ENST00000486310 TIAM1Q13009 1591 aa10.9□□□□□ -0.66
ARF4-204ENST00000486310 CFAP43Q8NDM7 1665 aa10.89□□□□□ -0.67
ARF4-204ENST00000486310 ABCA8O94911 1581 aa10.89□□□□□ -0.67
ARF4-204ENST00000486310 PLB1Q6P1J6 1458 aa10.88□□□□□ -0.67
ARF4-204ENST00000486310 UACAQ9BZF9 1416 aa10.87□□□□□ -0.67
ARF4-204ENST00000486310 EPRSP07814 1512 aaKnown RBP10.87□□□□□ -0.67
ARF4-204ENST00000486310 PPARGC1BQ86YN6 1023 aaKnown RBP10.87□□□□□ -0.67
ARF4-204ENST00000486310 LRRIQ1Q96JM4 1722 aa10.86□□□□□ -0.67
ARF4-204ENST00000486310 PLPPR3Q6T4P5 718 aa10.86□□□□□ -0.67
ARF4-204ENST00000486310 NUP153P49790 1475 aaKnown RBP10.86□□□□□ -0.67
ARF4-204ENST00000486310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.85□□□□□ -0.67
ARF4-204ENST00000486310 HNRNPUL2Q1KMD3 747 aaKnown RBP10.85□□□□□ -0.67
ARF4-204ENST00000486310 CDK11AQ9UQ88 783 aaPredicted RBP10.85□□□□□ -0.67
ARF4-204ENST00000486310 LRRC9Q6ZRR7 1453 aa10.84□□□□□ -0.67
ARF4-204ENST00000486310 ARHGEF11O15085 1522 aa10.84□□□□□ -0.67
ARF4-204ENST00000486310 ABCC2Q92887 1545 aa10.84□□□□□ -0.67
ARF4-204ENST00000486310 KANK4Q5T7N3 995 aaPredicted RBP10.84□□□□□ -0.67
ARF4-204ENST00000486310 MTUS2Q5JR59 1369 aa10.83□□□□□ -0.68
ARF4-204ENST00000486310 UHRF1BP1LA0JNW5 1464 aa10.83□□□□□ -0.68
ARF4-204ENST00000486310 CDK13Q14004 1512 aaKnown RBP10.82□□□□□ -0.68
ARF4-204ENST00000486310 EHBP1L1Q8N3D4 1523 aa10.82□□□□□ -0.68
ARF4-204ENST00000486310 ARID3CA6NKF2 412 aa10.81□□□□□ -0.68
ARF4-204ENST00000486310 TRIM26Q12899 539 aaPredicted RBP10.81□□□□□ -0.68
ARF4-204ENST00000486310 RIMBP3CA6NJZ7 1639 aa10.8□□□□□ -0.68
ARF4-204ENST00000486310 RIMBP3BA6NNM3 1639 aa10.8□□□□□ -0.68
ARF4-204ENST00000486310 RIMBP3Q9UFD9 1639 aa10.8□□□□□ -0.68
ARF4-204ENST00000486310 ATP10BO94823 1461 aa10.8□□□□□ -0.68
ARF4-204ENST00000486310 PLEKHD1A6NEE1 506 aa10.79□□□□□ -0.68
ARF4-204ENST00000486310 SUPT6HQ7KZ85 1726 aaKnown RBP10.79□□□□□ -0.68
ARF4-204ENST00000486310 ADCY10Q96PN6 1610 aa10.77□□□□□ -0.68
ARF4-204ENST00000486310 KDM5BQ9UGL1 1544 aa10.77□□□□□ -0.69
ARF4-204ENST00000486310 ZCCHC11Q5TAX3 1644 aaKnown RBP10.77□□□□□ -0.69
ARF4-204ENST00000486310 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
ARF4-204ENST00000486310 TROQ12816 1431 aaPredicted RBP10.76□□□□□ -0.69
ARF4-204ENST00000486310 MAGI3Q5TCQ9 1506 aa10.76□□□□□ -0.69
ARF4-204ENST00000486310 NCOA2Q15596 1464 aa10.74□□□□□ -0.69
ARF4-204ENST00000486310 CYB5RLQ6IPT4 315 aa10.73□□□□□ -0.69
ARF4-204ENST00000486310 KIF14Q15058 1648 aa10.72□□□□□ -0.69
ARF4-204ENST00000486310 PCGF6Q9BYE7 350 aa10.72□□□□□ -0.69
ARF4-204ENST00000486310 PHLDB1Q86UU1 1377 aa10.71□□□□□ -0.7
ARF4-204ENST00000486310 MYOM3Q5VTT5 1437 aa10.7□□□□□ -0.7
ARF4-204ENST00000486310 RRBP1Q9P2E9 1410 aaKnown RBP10.7□□□□□ -0.7
ARF4-204ENST00000486310 CCNB3Q8WWL7 1395 aa10.7□□□□□ -0.7
ARF4-204ENST00000486310 ITSN2Q9NZM3 1697 aa10.68□□□□□ -0.7
ARF4-204ENST00000486310 WDR7Q9Y4E6 1490 aa10.68□□□□□ -0.7
ARF4-204ENST00000486310 FGD6Q6ZV73 1430 aa10.67□□□□□ -0.7
ARF4-204ENST00000486310 ASXL2Q76L83 1435 aa10.67□□□□□ -0.7
ARF4-204ENST00000486310 MIA2Q96PC5 1412 aa10.67□□□□□ -0.7
ARF4-204ENST00000486310 KCNH8Q96L42 1107 aa10.66□□□□□ -0.7
ARF4-204ENST00000486310 ABCC10Q5T3U5 1492 aa10.65□□□□□ -0.7
ARF4-204ENST00000486310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.65□□□□□ -0.7
ARF4-204ENST00000486310 FAM50AQ14320 339 aaKnown RBP10.65□□□□□ -0.7
ARF4-204ENST00000486310 MAPKBP1O60336 1514 aa10.65□□□□□ -0.71
ARF4-204ENST00000486310 PTPN23Q9H3S7 1636 aa10.64□□□□□ -0.71
ARF4-204ENST00000486310 CDC42BPAQ5VT25 1732 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms