RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
NELFCD-209ENST00000486263 RAPGEF2Q9Y4G8 1499 aa22.62■■□□□ 1.21
NELFCD-209ENST00000486263 KIF21BO75037 1637 aa22.57■■□□□ 1.2
NELFCD-209ENST00000486263 CEP170Q5SW79 1584 aa22.57■■□□□ 1.2
NELFCD-209ENST00000486263 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
NELFCD-209ENST00000486263 UBTFP17480 764 aaKnown RBP22.55■■□□□ 1.2
NELFCD-209ENST00000486263 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
NELFCD-209ENST00000486263 CYB5RLQ6IPT4 315 aa22.53■■□□□ 1.2
NELFCD-209ENST00000486263 LOC105371045A0A1W2PR82 267 aa22.51■■□□□ 1.19
NELFCD-209ENST00000486263 SHROOM2Q13796 1616 aa22.47■■□□□ 1.19
NELFCD-209ENST00000486263 JPH4Q96JJ6 628 aa22.4■■□□□ 1.18
NELFCD-209ENST00000486263 KIAA0586Q9BVV6 1533 aa22.4■■□□□ 1.18
NELFCD-209ENST00000486263 TNIKQ9UKE5 1360 aa22.37■■□□□ 1.17
NELFCD-209ENST00000486263 ERCC6L2Q5T890 1561 aa22.35■■□□□ 1.17
NELFCD-209ENST00000486263 PRG4Q92954 1404 aaPredicted RBP22.34■■□□□ 1.17
NELFCD-209ENST00000486263 RANGAP1P46060 587 aaPredicted RBP22.33■■□□□ 1.17
NELFCD-209ENST00000486263 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.16
NELFCD-209ENST00000486263 IQGAP2Q13576 1575 aa22.29■■□□□ 1.16
NELFCD-209ENST00000486263 CLIP1P30622 1438 aa22.18■■□□□ 1.14
NELFCD-209ENST00000486263 CEP162Q5TB80 1403 aa22.18■■□□□ 1.14
NELFCD-209ENST00000486263 CARMIL2Q6F5E8 1435 aa22.16■■□□□ 1.14
NELFCD-209ENST00000486263 UGGT2Q9NYU1 1516 aa22.16■■□□□ 1.14
NELFCD-209ENST00000486263 P3H3Q8IVL6 736 aa22.14■■□□□ 1.13
NELFCD-209ENST00000486263 EFCAB5A4FU69 1503 aa22.11■■□□□ 1.13
NELFCD-209ENST00000486263 TRHP20396 242 aaPredicted RBP22.1■■□□□ 1.13
NELFCD-209ENST00000486263 PTPRGP23470 1445 aa22.08■■□□□ 1.13
NELFCD-209ENST00000486263 ARHGAP35Q9NRY4 1499 aa22.07■■□□□ 1.12
NELFCD-209ENST00000486263 DISP1Q96F81 1524 aa22.06■■□□□ 1.12
NELFCD-209ENST00000486263 TTBK1Q5TCY1 1321 aaPredicted RBP22.06■■□□□ 1.12
NELFCD-209ENST00000486263 SAMD9Q5K651 1589 aa22.05■■□□□ 1.12
NELFCD-209ENST00000486263 KIAA0556O60303 1618 aa22.05■■□□□ 1.12
NELFCD-209ENST00000486263 FHOD3Q2V2M9 1422 aa22.02■■□□□ 1.12
NELFCD-209ENST00000486263 NPM1P06748 294 aaKnown RBP eCLIP22.01■■□□□ 1.11
NELFCD-209ENST00000486263 ADCY10Q96PN6 1610 aa22■■□□□ 1.11
NELFCD-209ENST00000486263 UHRF1BP1LA0JNW5 1464 aa21.95■■□□□ 1.1
NELFCD-209ENST00000486263 MAPKBP1O60336 1514 aa21.95■■□□□ 1.1
NELFCD-209ENST00000486263 FMN1Q68DA7 1419 aa21.94■■□□□ 1.1
NELFCD-209ENST00000486263 UACAQ9BZF9 1416 aa21.93■■□□□ 1.1
NELFCD-209ENST00000486263 ATP1B4Q9UN42 357 aaPredicted RBP21.91■■□□□ 1.1
NELFCD-209ENST00000486263 ABCC2Q92887 1545 aa21.9■■□□□ 1.1
NELFCD-209ENST00000486263 VPS8Q8N3P4 1428 aa21.88■■□□□ 1.09
NELFCD-209ENST00000486263 KIF13AQ9H1H9 1805 aa21.85■■□□□ 1.09
NELFCD-209ENST00000486263 ABCC10Q5T3U5 1492 aa21.85■■□□□ 1.09
NELFCD-209ENST00000486263 KDM5BQ9UGL1 1544 aa21.82■■□□□ 1.08
NELFCD-209ENST00000486263 PLB1Q6P1J6 1458 aa21.8■■□□□ 1.08
NELFCD-209ENST00000486263 APLP2Q06481 763 aa21.8■■□□□ 1.08
NELFCD-209ENST00000486263 CASKIN1Q8WXD9 1431 aa21.8■■□□□ 1.08
NELFCD-209ENST00000486263 ABCA8O94911 1581 aa21.78■■□□□ 1.08
NELFCD-209ENST00000486263 DIP2BQ9P265 1576 aa21.78■■□□□ 1.08
NELFCD-209ENST00000486263 RAPGEF6Q8TEU7 1601 aa21.78■■□□□ 1.08
NELFCD-209ENST00000486263 FAM69CQ0P6D2 419 aa21.78■■□□□ 1.08
NELFCD-209ENST00000486263 FYCO1Q9BQS8 1478 aa21.77■■□□□ 1.08
NELFCD-209ENST00000486263 PCF11O94913 1555 aaKnown RBP21.77■■□□□ 1.08
NELFCD-209ENST00000486263 ASXL2Q76L83 1435 aa21.75■■□□□ 1.07
NELFCD-209ENST00000486263 HECW1Q76N89 1606 aa21.75■■□□□ 1.07
NELFCD-209ENST00000486263 ARID3CA6NKF2 412 aa21.74■■□□□ 1.07
NELFCD-209ENST00000486263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.74■■□□□ 1.07
NELFCD-209ENST00000486263 HNRNPUL2Q1KMD3 747 aaKnown RBP21.74■■□□□ 1.07
NELFCD-209ENST00000486263 ZCCHC11Q5TAX3 1644 aaKnown RBP21.73■■□□□ 1.07
NELFCD-209ENST00000486263 GLI2P10070 1586 aa21.7■■□□□ 1.06
NELFCD-209ENST00000486263 NUP153P49790 1475 aaKnown RBP21.69■■□□□ 1.06
NELFCD-209ENST00000486263 CCDC18Q5T9S5 1454 aa21.67■■□□□ 1.06
NELFCD-209ENST00000486263 EPRSP07814 1512 aaKnown RBP21.65■■□□□ 1.06
NELFCD-209ENST00000486263 CDK11AQ9UQ88 783 aaPredicted RBP21.65■■□□□ 1.06
NELFCD-209ENST00000486263 WDR7Q9Y4E6 1490 aa21.64■■□□□ 1.05
NELFCD-209ENST00000486263 ATP10BO94823 1461 aa21.62■■□□□ 1.05
NELFCD-209ENST00000486263 CDK13Q14004 1512 aaKnown RBP21.61■■□□□ 1.05
NELFCD-209ENST00000486263 PLEKHD1A6NEE1 506 aa21.59■■□□□ 1.05
NELFCD-209ENST00000486263 TSPOAP1O95153 1857 aa21.58■■□□□ 1.05
NELFCD-209ENST00000486263 MAP3K1Q13233 1512 aa21.58■■□□□ 1.04
NELFCD-209ENST00000486263 TIAM1Q13009 1591 aa21.57■■□□□ 1.04
NELFCD-209ENST00000486263 LRRIQ1Q96JM4 1722 aa21.57■■□□□ 1.04
NELFCD-209ENST00000486263 MTUS2Q5JR59 1369 aa21.56■■□□□ 1.04
NELFCD-209ENST00000486263 MAP3K4Q9Y6R4 1608 aa21.55■■□□□ 1.04
NELFCD-209ENST00000486263 CFAP43Q8NDM7 1665 aa21.54■■□□□ 1.04
NELFCD-209ENST00000486263 PPARGC1BQ86YN6 1023 aaKnown RBP21.53■■□□□ 1.04
NELFCD-209ENST00000486263 PPRC1Q5VV67 1664 aaKnown RBP21.51■■□□□ 1.03
NELFCD-209ENST00000486263 KANK4Q5T7N3 995 aaPredicted RBP21.51■■□□□ 1.03
NELFCD-209ENST00000486263 LRRC9Q6ZRR7 1453 aa21.5■■□□□ 1.03
NELFCD-209ENST00000486263 TEX14Q8IWB6 1497 aa21.49■■□□□ 1.03
NELFCD-209ENST00000486263 KCNH8Q96L42 1107 aa21.48■■□□□ 1.03
NELFCD-209ENST00000486263 TROQ12816 1431 aaPredicted RBP21.47■■□□□ 1.03
NELFCD-209ENST00000486263 KDM6BO15054 1643 aa21.47■■□□□ 1.03
NELFCD-209ENST00000486263 EHBP1L1Q8N3D4 1523 aa21.46■■□□□ 1.03
NELFCD-209ENST00000486263 MAGI3Q5TCQ9 1506 aa21.45■■□□□ 1.02
NELFCD-209ENST00000486263 CD109Q6YHK3 1445 aa21.45■■□□□ 1.02
NELFCD-209ENST00000486263 ABCA9Q8IUA7 1624 aa21.4■■□□□ 1.02
NELFCD-209ENST00000486263 KIF14Q15058 1648 aa21.38■■□□□ 1.01
NELFCD-209ENST00000486263 SUPT6HQ7KZ85 1726 aaKnown RBP21.38■■□□□ 1.01
NELFCD-209ENST00000486263 PHLDB1Q86UU1 1377 aa21.35■■□□□ 1.01
NELFCD-209ENST00000486263 NCOA2Q15596 1464 aa21.34■■□□□ 1.01
NELFCD-209ENST00000486263 CCNB3Q8WWL7 1395 aa21.33■■□□□ 1
NELFCD-209ENST00000486263 COL17A1Q9UMD9 1497 aaPredicted RBP21.32■■□□□ 1
NELFCD-209ENST00000486263 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.28■■□□□ 1
NELFCD-209ENST00000486263 NEO1Q92859 1461 aa21.27■■□□□ 1
NELFCD-209ENST00000486263 ARAP3Q8WWN8 1544 aa21.27■■□□□ 1
NELFCD-209ENST00000486263 CFDP1Q9UEE9 299 aaPredicted RBP21.24■□□□□ 0.99
NELFCD-209ENST00000486263 TTC37Q6PGP7 1564 aa21.23■□□□□ 0.99
NELFCD-209ENST00000486263 MYOM3Q5VTT5 1437 aa21.23■□□□□ 0.99
NELFCD-209ENST00000486263 GPATCH8Q9UKJ3 1502 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms