RNA–Protein interactions for RNA: ENST00000486261.5

KRIT1-222, Transcript of KRIT1, ankyrin repeat containing, humanhuman

TSL 1 (best)

Gene KRIT1, Length 4,057 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-222ENST00000486261 TPRNQ4KMQ1 711 aa7.64□□□□□ -1.19
KRIT1-222ENST00000486261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.63□□□□□ -1.19
KRIT1-222ENST00000486261 HNRNPUL2Q1KMD3 747 aaKnown RBP7.63□□□□□ -1.19
KRIT1-222ENST00000486261 PODXL2Q9NZ53 605 aa7.63□□□□□ -1.19
KRIT1-222ENST00000486261 EIF5BO60841 1220 aaKnown RBP7.63□□□□□ -1.19
KRIT1-222ENST00000486261 ARHGEF11O15085 1522 aa7.63□□□□□ -1.19
KRIT1-222ENST00000486261 CARMIL1Q5VZK9 1371 aa7.63□□□□□ -1.19
KRIT1-222ENST00000486261 CUX1P39880 1505 aa7.63□□□□□ -1.19
KRIT1-222ENST00000486261 ERICH3Q5RHP9 1530 aa7.6□□□□□ -1.19
KRIT1-222ENST00000486261 GRIN2AQ12879 1464 aa7.6□□□□□ -1.19
KRIT1-222ENST00000486261 PTPRGP23470 1445 aa7.59□□□□□ -1.19
KRIT1-222ENST00000486261 CDK11AQ9UQ88 783 aaPredicted RBP7.59□□□□□ -1.19
KRIT1-222ENST00000486261 HAP1P54257 671 aaPredicted RBP7.58□□□□□ -1.2
KRIT1-222ENST00000486261 PRG4Q92954 1404 aaPredicted RBP7.58□□□□□ -1.2
KRIT1-222ENST00000486261 UBTFP17480 764 aaKnown RBP7.58□□□□□ -1.2
KRIT1-222ENST00000486261 TOP2BQ02880 1626 aa7.58□□□□□ -1.2
KRIT1-222ENST00000486261 TARBP1Q13395 1621 aaKnown RBP7.58□□□□□ -1.2
KRIT1-222ENST00000486261 EEA1Q15075 1411 aa7.58□□□□□ -1.2
KRIT1-222ENST00000486261 APLP2Q06481 763 aa7.57□□□□□ -1.2
KRIT1-222ENST00000486261 FAM69CQ0P6D2 419 aa7.57□□□□□ -1.2
KRIT1-222ENST00000486261 GOLGA3Q08378 1498 aa7.56□□□□□ -1.2
KRIT1-222ENST00000486261 TNIKQ9UKE5 1360 aa7.56□□□□□ -1.2
KRIT1-222ENST00000486261 KIAA0586Q9BVV6 1533 aa7.55□□□□□ -1.2
KRIT1-222ENST00000486261 RIMBP3CA6NJZ7 1639 aa7.54□□□□□ -1.2
KRIT1-222ENST00000486261 RIMBP3BA6NNM3 1639 aa7.54□□□□□ -1.2
KRIT1-222ENST00000486261 RIMBP3Q9UFD9 1639 aa7.54□□□□□ -1.2
KRIT1-222ENST00000486261 ATP1B4Q9UN42 357 aaPredicted RBP7.54□□□□□ -1.2
KRIT1-222ENST00000486261 NUP160Q12769 1436 aa7.54□□□□□ -1.2
KRIT1-222ENST00000486261 IGF1RP08069 1367 aa7.53□□□□□ -1.2
KRIT1-222ENST00000486261 HOMEZQ8IX15 550 aa7.53□□□□□ -1.2
KRIT1-222ENST00000486261 RAPGEF2Q9Y4G8 1499 aa7.52□□□□□ -1.2
KRIT1-222ENST00000486261 ARXQ96QS3 562 aa7.52□□□□□ -1.21
KRIT1-222ENST00000486261 TAOK2Q9UL54 1235 aa7.52□□□□□ -1.21
KRIT1-222ENST00000486261 MYT1LQ9UL68 1186 aa7.52□□□□□ -1.21
KRIT1-222ENST00000486261 ARAP1Q96P48 1450 aa7.51□□□□□ -1.21
KRIT1-222ENST00000486261 BIVM-ERCC5R4GMW8 1640 aa7.51□□□□□ -1.21
KRIT1-222ENST00000486261 CHD1O14646 1710 aa7.51□□□□□ -1.21
KRIT1-222ENST00000486261 PLEKHD1A6NEE1 506 aa7.51□□□□□ -1.21
KRIT1-222ENST00000486261 ADAMTS12P58397 1594 aa7.5□□□□□ -1.21
KRIT1-222ENST00000486261 PHF23Q9BUL5 403 aaPredicted RBP7.5□□□□□ -1.21
KRIT1-222ENST00000486261 CUL7Q14999 1698 aa7.5□□□□□ -1.21
KRIT1-222ENST00000486261 PLB1Q6P1J6 1458 aa7.49□□□□□ -1.21
KRIT1-222ENST00000486261 SLC4A1APQ9BWU0 796 aaKnown RBP7.49□□□□□ -1.21
KRIT1-222ENST00000486261 BCANQ96GW7 911 aa7.48□□□□□ -1.21
KRIT1-222ENST00000486261 ESF1Q9H501 851 aaKnown RBP7.48□□□□□ -1.21
KRIT1-222ENST00000486261 ABCA5Q8WWZ7 1642 aa7.48□□□□□ -1.21
KRIT1-222ENST00000486261 CLASP1Q7Z460 1538 aa7.47□□□□□ -1.21
KRIT1-222ENST00000486261 PBRM1Q86U86 1689 aa7.47□□□□□ -1.21
KRIT1-222ENST00000486261 KLHL34Q8N239 644 aa7.47□□□□□ -1.21
KRIT1-222ENST00000486261 KCNH8Q96L42 1107 aa7.47□□□□□ -1.21
KRIT1-222ENST00000486261 TEX14Q8IWB6 1497 aa7.46□□□□□ -1.22
KRIT1-222ENST00000486261 UACAQ9BZF9 1416 aa7.46□□□□□ -1.22
KRIT1-222ENST00000486261 CEP170Q5SW79 1584 aa7.45□□□□□ -1.22
KRIT1-222ENST00000486261 C14orf37Q86TY3 774 aa7.44□□□□□ -1.22
KRIT1-222ENST00000486261 PHLDB1Q86UU1 1377 aa7.44□□□□□ -1.22
KRIT1-222ENST00000486261 P3H3Q8IVL6 736 aa7.42□□□□□ -1.22
KRIT1-222ENST00000486261 ARID4BQ4LE39 1312 aaPredicted RBP7.42□□□□□ -1.22
KRIT1-222ENST00000486261 IQGAP2Q13576 1575 aa7.41□□□□□ -1.22
KRIT1-222ENST00000486261 EFCAB2Q5VUJ9 269 aa7.38□□□□□ -1.23
KRIT1-222ENST00000486261 ABCC2Q92887 1545 aa7.38□□□□□ -1.23
KRIT1-222ENST00000486261 ABCC10Q5T3U5 1492 aa7.38□□□□□ -1.23
KRIT1-222ENST00000486261 CLIP1P30622 1438 aa7.38□□□□□ -1.23
KRIT1-222ENST00000486261 UHRF1BP1LA0JNW5 1464 aa7.37□□□□□ -1.23
KRIT1-222ENST00000486261 POGZQ7Z3K3 1410 aa7.37□□□□□ -1.23
KRIT1-222ENST00000486261 ARID3CA6NKF2 412 aa7.37□□□□□ -1.23
KRIT1-222ENST00000486261 FMN1Q68DA7 1419 aa7.36□□□□□ -1.23
KRIT1-222ENST00000486261 NPM2Q86SE8 214 aaKnown RBP7.36□□□□□ -1.23
KRIT1-222ENST00000486261 ASXL2Q76L83 1435 aa7.36□□□□□ -1.23
KRIT1-222ENST00000486261 CD109Q6YHK3 1445 aa7.35□□□□□ -1.23
KRIT1-222ENST00000486261 UGGT2Q9NYU1 1516 aa7.34□□□□□ -1.23
KRIT1-222ENST00000486261 MAPKBP1O60336 1514 aa7.34□□□□□ -1.23
KRIT1-222ENST00000486261 RUSC2Q8N2Y8 1516 aa7.33□□□□□ -1.24
KRIT1-222ENST00000486261 GTF3C3Q9Y5Q9 886 aa7.33□□□□□ -1.24
KRIT1-222ENST00000486261 SHROOM2Q13796 1616 aa7.32□□□□□ -1.24
KRIT1-222ENST00000486261 WDR7Q9Y4E6 1490 aa7.31□□□□□ -1.24
KRIT1-222ENST00000486261 PLEKHG5O94827 1062 aa7.31□□□□□ -1.24
KRIT1-222ENST00000486261 PRXQ9BXM0 1461 aa7.31□□□□□ -1.24
KRIT1-222ENST00000486261 KDM6BO15054 1643 aa7.29□□□□□ -1.24
KRIT1-222ENST00000486261 EFCAB5A4FU69 1503 aa7.29□□□□□ -1.24
KRIT1-222ENST00000486261 KDM5BQ9UGL1 1544 aa7.28□□□□□ -1.24
KRIT1-222ENST00000486261 DMRT2Q9Y5R5 561 aa7.27□□□□□ -1.24
KRIT1-222ENST00000486261 MTUS2Q5JR59 1369 aa7.27□□□□□ -1.25
KRIT1-222ENST00000486261 ZNF777Q9ULD5 760 aaPredicted RBP7.27□□□□□ -1.25
KRIT1-222ENST00000486261 TSPY4P0CV99 314 aa7.26□□□□□ -1.25
KRIT1-222ENST00000486261 TSPY10P0CW01 314 aa7.26□□□□□ -1.25
KRIT1-222ENST00000486261 RSPH4AQ5TD94 716 aa7.26□□□□□ -1.25
KRIT1-222ENST00000486261 AKNAQ7Z591 1439 aa7.26□□□□□ -1.25
KRIT1-222ENST00000486261 KIAA0556O60303 1618 aa7.26□□□□□ -1.25
KRIT1-222ENST00000486261 BCL11AQ9H165 835 aa7.25□□□□□ -1.25
KRIT1-222ENST00000486261 EPRSP07814 1512 aaKnown RBP7.25□□□□□ -1.25
KRIT1-222ENST00000486261 ERCC6L2Q5T890 1561 aa7.25□□□□□ -1.25
KRIT1-222ENST00000486261 DENND4BO75064 1496 aaPredicted RBP7.25□□□□□ -1.25
KRIT1-222ENST00000486261 GLI2P10070 1586 aa7.25□□□□□ -1.25
KRIT1-222ENST00000486261 CFDP1Q9UEE9 299 aaPredicted RBP7.25□□□□□ -1.25
KRIT1-222ENST00000486261 NEO1Q92859 1461 aa7.25□□□□□ -1.25
KRIT1-222ENST00000486261 DISP1Q96F81 1524 aa7.24□□□□□ -1.25
KRIT1-222ENST00000486261 PLCB2Q00722 1185 aa7.24□□□□□ -1.25
KRIT1-222ENST00000486261 FHOD3Q2V2M9 1422 aa7.24□□□□□ -1.25
KRIT1-222ENST00000486261 POLR3GLQ9BT43 218 aa7.23□□□□□ -1.25
KRIT1-222ENST00000486261 MAGI3Q5TCQ9 1506 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms