RNA–Protein interactions for RNA: ENST00000485556.5

STRC-211, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 4,253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-211ENST00000485556 VPS8Q8N3P4 1428 aa13.74□□□□□ -0.21
STRC-211ENST00000485556 TDRD9Q8NDG6 1382 aaKnown RBP13.73□□□□□ -0.21
STRC-211ENST00000485556 CADPSQ9ULU8 1353 aa13.73□□□□□ -0.21
STRC-211ENST00000485556 FHAD1B1AJZ9 1412 aa13.72□□□□□ -0.21
STRC-211ENST00000485556 MIER1Q8N108 512 aa13.72□□□□□ -0.21
STRC-211ENST00000485556 CLSPNQ9HAW4 1339 aa13.72□□□□□ -0.21
STRC-211ENST00000485556 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.22
STRC-211ENST00000485556 CCNB3Q8WWL7 1395 aa13.7□□□□□ -0.22
STRC-211ENST00000485556 ESF1Q9H501 851 aaKnown RBP13.7□□□□□ -0.22
STRC-211ENST00000485556 KANK4Q5T7N3 995 aaPredicted RBP13.7□□□□□ -0.22
STRC-211ENST00000485556 HNRNPUQ00839 825 aaKnown RBP eCLIP13.69□□□□□ -0.22
STRC-211ENST00000485556 EIF4G1Q04637 1599 aaKnown RBP13.68□□□□□ -0.22
STRC-211ENST00000485556 FAM9BQ8IZU0 186 aa13.67□□□□□ -0.22
STRC-211ENST00000485556 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
STRC-211ENST00000485556 RUSC2Q8N2Y8 1516 aa13.66□□□□□ -0.22
STRC-211ENST00000485556 SIN3AQ96ST3 1273 aa13.66□□□□□ -0.22
STRC-211ENST00000485556 EIF4G2P78344 907 aaKnown RBP eCLIP13.65□□□□□ -0.22
STRC-211ENST00000485556 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
STRC-211ENST00000485556 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
STRC-211ENST00000485556 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
STRC-211ENST00000485556 FKBP8Q14318 412 aa13.6□□□□□ -0.23
STRC-211ENST00000485556 SALL2Q9Y467 1007 aaPredicted RBP13.59□□□□□ -0.23
STRC-211ENST00000485556 TMC1Q8TDI8 760 aa13.59□□□□□ -0.23
STRC-211ENST00000485556 MRS2Q9HD23 443 aa13.59□□□□□ -0.23
STRC-211ENST00000485556 CANXP27824 592 aaKnown RBP13.58□□□□□ -0.24
STRC-211ENST00000485556 NEFMP07197 916 aa13.58□□□□□ -0.24
STRC-211ENST00000485556 FANCD2Q9BXW9 1451 aa13.54□□□□□ -0.24
STRC-211ENST00000485556 SENP3Q9H4L4 574 aaPredicted RBP13.53□□□□□ -0.24
STRC-211ENST00000485556 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
STRC-211ENST00000485556 ARHGAP35Q9NRY4 1499 aa13.53□□□□□ -0.24
STRC-211ENST00000485556 FHOD3Q2V2M9 1422 aa13.53□□□□□ -0.24
STRC-211ENST00000485556 SETD5Q9C0A6 1442 aa13.5□□□□□ -0.25
STRC-211ENST00000485556 BCL11AQ9H165 835 aa13.49□□□□□ -0.25
STRC-211ENST00000485556 NCAPD3P42695 1498 aa13.49□□□□□ -0.25
STRC-211ENST00000485556 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
STRC-211ENST00000485556 CARMIL2Q6F5E8 1435 aa13.48□□□□□ -0.25
STRC-211ENST00000485556 RTL5Q5HYW3 569 aaPredicted RBP13.47□□□□□ -0.25
STRC-211ENST00000485556 CARD11Q9BXL7 1154 aa13.47□□□□□ -0.25
STRC-211ENST00000485556 RAB3GAP2Q9H2M9 1393 aa13.46□□□□□ -0.25
STRC-211ENST00000485556 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
STRC-211ENST00000485556 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
STRC-211ENST00000485556 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
STRC-211ENST00000485556 FOXD1Q16676 465 aa13.43□□□□□ -0.26
STRC-211ENST00000485556 IGF1RP08069 1367 aa13.43□□□□□ -0.26
STRC-211ENST00000485556 SENP3-EIF4A1A0A087X0R7 540 aa13.42□□□□□ -0.26
STRC-211ENST00000485556 IRX6P78412 446 aaPredicted RBP13.42□□□□□ -0.26
STRC-211ENST00000485556 TIMELESSQ9UNS1 1208 aa13.42□□□□□ -0.26
STRC-211ENST00000485556 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
STRC-211ENST00000485556 RAD54L2Q9Y4B4 1467 aa13.4□□□□□ -0.27
STRC-211ENST00000485556 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
STRC-211ENST00000485556 DCAF11Q8TEB1 546 aa13.39□□□□□ -0.27
STRC-211ENST00000485556 PKD2Q13563 968 aa13.38□□□□□ -0.27
STRC-211ENST00000485556 CCDC136Q96JN2 1154 aa13.36□□□□□ -0.27
STRC-211ENST00000485556 MPHOSPH9Q99550 1183 aa13.36□□□□□ -0.27
STRC-211ENST00000485556 PRKCSHP14314 528 aaPredicted RBP13.35□□□□□ -0.27
STRC-211ENST00000485556 NPM2Q86SE8 214 aaKnown RBP13.35□□□□□ -0.27
STRC-211ENST00000485556 ARID4BQ4LE39 1312 aaPredicted RBP13.35□□□□□ -0.27
STRC-211ENST00000485556 GAPVD1Q14C86 1478 aa13.34□□□□□ -0.27
STRC-211ENST00000485556 ANP32AP39687 249 aaKnown RBP13.33□□□□□ -0.28
STRC-211ENST00000485556 CDCA8Q53HL2 280 aa13.33□□□□□ -0.28
STRC-211ENST00000485556 KNSTRNQ9Y448 316 aa13.33□□□□□ -0.28
STRC-211ENST00000485556 EFCAB2Q5VUJ9 269 aa13.32□□□□□ -0.28
STRC-211ENST00000485556 CFTRP13569 1480 aa13.32□□□□□ -0.28
STRC-211ENST00000485556 NUP155O75694 1391 aa13.31□□□□□ -0.28
STRC-211ENST00000485556 SYNJ1O43426 1573 aa13.31□□□□□ -0.28
STRC-211ENST00000485556 HSPA5P11021 654 aaKnown RBP13.31□□□□□ -0.28
STRC-211ENST00000485556 HNRNPMP52272 730 aaKnown RBP eCLIP13.3□□□□□ -0.28
STRC-211ENST00000485556 CCDC18Q5T9S5 1454 aa13.3□□□□□ -0.28
STRC-211ENST00000485556 ANKRD30AQ9BXX3 1397 aa13.3□□□□□ -0.28
STRC-211ENST00000485556 GGT6Q6P531 493 aa13.29□□□□□ -0.28
STRC-211ENST00000485556 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.29□□□□□ -0.28
STRC-211ENST00000485556 DHX57Q6P158 1386 aaKnown RBP13.27□□□□□ -0.28
STRC-211ENST00000485556 KANK1Q14678 1352 aa13.27□□□□□ -0.28
STRC-211ENST00000485556 NESP48681 1621 aa13.27□□□□□ -0.29
STRC-211ENST00000485556 SUPT16HQ9Y5B9 1047 aaKnown RBP13.27□□□□□ -0.29
STRC-211ENST00000485556 L3MBTL2Q969R5 705 aa13.26□□□□□ -0.29
STRC-211ENST00000485556 AQRO60306 1485 aaKnown RBP eCLIP13.26□□□□□ -0.29
STRC-211ENST00000485556 KIF21BO75037 1637 aa13.25□□□□□ -0.29
STRC-211ENST00000485556 MLECQ14165 292 aa13.25□□□□□ -0.29
STRC-211ENST00000485556 CC2D1BQ5T0F9 858 aaKnown RBP13.25□□□□□ -0.29
STRC-211ENST00000485556 BICRAQ9NZM4 1560 aa13.24□□□□□ -0.29
STRC-211ENST00000485556 PLEKHG5O94827 1062 aa13.24□□□□□ -0.29
STRC-211ENST00000485556 TMF1P82094 1093 aa13.23□□□□□ -0.29
STRC-211ENST00000485556 POGKQ9P215 609 aa13.23□□□□□ -0.29
STRC-211ENST00000485556 PTPRGP23470 1445 aa13.23□□□□□ -0.29
STRC-211ENST00000485556 HMGXB3Q12766 1538 aa13.22□□□□□ -0.29
STRC-211ENST00000485556 PPM1GO15355 546 aaPredicted RBP13.22□□□□□ -0.29
STRC-211ENST00000485556 CFAP53Q96M91 514 aa13.22□□□□□ -0.29
STRC-211ENST00000485556 TNNT2P45379 298 aaPredicted RBP13.21□□□□□ -0.29
STRC-211ENST00000485556 KIF3BO15066 747 aa13.21□□□□□ -0.3
STRC-211ENST00000485556 C14orf37Q86TY3 774 aa13.21□□□□□ -0.3
STRC-211ENST00000485556 CC2D2AQ9P2K1 1620 aa13.21□□□□□ -0.3
STRC-211ENST00000485556 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
STRC-211ENST00000485556 NEUROD2Q15784 382 aa13.19□□□□□ -0.3
STRC-211ENST00000485556 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
STRC-211ENST00000485556 SPAG9O60271 1321 aaKnown RBP13.19□□□□□ -0.3
STRC-211ENST00000485556 CCER2I3L3R5 266 aa13.19□□□□□ -0.3
STRC-211ENST00000485556 CUX1P39880 1505 aa13.18□□□□□ -0.3
STRC-211ENST00000485556 PHLDB1Q86UU1 1377 aa13.18□□□□□ -0.3
STRC-211ENST00000485556 PRXQ9BXM0 1461 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms