RNA–Protein interactions for RNA: ENST00000484922.1

SHROOM4-205, Transcript of shroom family member 4, humanhuman

TSL 5

Gene SHROOM4, Length 295 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-205ENST00000484922 HMGXB3Q12766 1538 aa4.72□□□□□ -1.65
SHROOM4-205ENST00000484922 NCAPD3P42695 1498 aa4.71□□□□□ -1.66
SHROOM4-205ENST00000484922 BAZ1BQ9UIG0 1483 aaKnown RBP4.7□□□□□ -1.66
SHROOM4-205ENST00000484922 ATAD2BQ9ULI0 1458 aa4.7□□□□□ -1.66
SHROOM4-205ENST00000484922 MROH2BQ7Z745 1585 aa4.7□□□□□ -1.66
SHROOM4-205ENST00000484922 WIZO95785 1651 aa4.68□□□□□ -1.66
SHROOM4-205ENST00000484922 CREBZFQ9NS37 354 aa4.68□□□□□ -1.66
SHROOM4-205ENST00000484922 ZRANB1Q9UGI0 708 aa4.66□□□□□ -1.66
SHROOM4-205ENST00000484922 RSF1Q96T23 1441 aaPredicted RBP4.65□□□□□ -1.66
SHROOM4-205ENST00000484922 EHMT2Q96KQ7 1210 aa4.65□□□□□ -1.67
SHROOM4-205ENST00000484922 DCBLD2Q96PD2 775 aa4.65□□□□□ -1.67
SHROOM4-205ENST00000484922 TOP2AP11388 1531 aaKnown RBP4.64□□□□□ -1.67
SHROOM4-205ENST00000484922 LAMC3Q9Y6N6 1575 aa4.63□□□□□ -1.67
SHROOM4-205ENST00000484922 SPDYE4A6NLX3 237 aa4.63□□□□□ -1.67
SHROOM4-205ENST00000484922 GALR2O43603 387 aaPredicted RBP4.63□□□□□ -1.67
SHROOM4-205ENST00000484922 ZNF579Q8NAF0 562 aaKnown RBP4.62□□□□□ -1.67
SHROOM4-205ENST00000484922 PRDM2Q13029 1718 aa4.61□□□□□ -1.67
SHROOM4-205ENST00000484922 STAG3Q9UJ98 1225 aa4.61□□□□□ -1.67
SHROOM4-205ENST00000484922 POTEB2H3BUK9 544 aa4.6□□□□□ -1.67
SHROOM4-205ENST00000484922 CLCN6P51797 869 aa4.6□□□□□ -1.67
SHROOM4-205ENST00000484922 PHF12Q96QT6 1004 aa4.6□□□□□ -1.67
SHROOM4-205ENST00000484922 SUPT5HO00267 1087 aaKnown RBP4.59□□□□□ -1.67
SHROOM4-205ENST00000484922 ERCC6Q03468 1493 aa4.59□□□□□ -1.67
SHROOM4-205ENST00000484922 PELP1Q8IZL8 1130 aaKnown RBP4.59□□□□□ -1.67
SHROOM4-205ENST00000484922 PDS5BQ9NTI5 1447 aa4.58□□□□□ -1.68
SHROOM4-205ENST00000484922 MNX1P50219 401 aaPredicted RBP4.58□□□□□ -1.68
SHROOM4-205ENST00000484922 OTUD5Q96G74 571 aa4.58□□□□□ -1.68
SHROOM4-205ENST00000484922 CADPSQ9ULU8 1353 aa4.57□□□□□ -1.68
SHROOM4-205ENST00000484922 KIF21AQ7Z4S6 1674 aa4.57□□□□□ -1.68
SHROOM4-205ENST00000484922 POTEMA6NI47 508 aa4.56□□□□□ -1.68
SHROOM4-205ENST00000484922 CCDC88BA6NC98 1476 aa4.56□□□□□ -1.68
SHROOM4-205ENST00000484922 NESP48681 1621 aa4.55□□□□□ -1.68
SHROOM4-205ENST00000484922 CFTRP13569 1480 aa4.55□□□□□ -1.68
SHROOM4-205ENST00000484922 CEP164Q9UPV0 1460 aa4.55□□□□□ -1.68
SHROOM4-205ENST00000484922 PAK3O75914 559 aaPredicted RBP4.54□□□□□ -1.68
SHROOM4-205ENST00000484922 NPM1P06748 294 aaKnown RBP eCLIP4.54□□□□□ -1.68
SHROOM4-205ENST00000484922 CUX2O14529 1486 aa4.53□□□□□ -1.68
SHROOM4-205ENST00000484922 FANCD2Q9BXW9 1451 aa4.53□□□□□ -1.68
SHROOM4-205ENST00000484922 POTEJP0CG39 1038 aa4.52□□□□□ -1.69
SHROOM4-205ENST00000484922 POTEGQ6S5H5 508 aa4.52□□□□□ -1.69
SHROOM4-205ENST00000484922 MS4A3Q96HJ5 214 aa4.52□□□□□ -1.69
SHROOM4-205ENST00000484922 TSPYL2Q9H2G4 693 aaPredicted RBP4.52□□□□□ -1.69
SHROOM4-205ENST00000484922 ABCC8Q09428 1581 aa4.52□□□□□ -1.69
SHROOM4-205ENST00000484922 MRC2Q9UBG0 1479 aa4.51□□□□□ -1.69
SHROOM4-205ENST00000484922 PCDH10Q9P2E7 1040 aa4.51□□□□□ -1.69
SHROOM4-205ENST00000484922 THOC2Q8NI27 1593 aaKnown RBP4.51□□□□□ -1.69
SHROOM4-205ENST00000484922 ATMINO43313 823 aaPredicted RBP4.5□□□□□ -1.69
SHROOM4-205ENST00000484922 ASTLQ6HA08 431 aaPredicted RBP4.49□□□□□ -1.69
SHROOM4-205ENST00000484922 WDR62O43379 1518 aa4.49□□□□□ -1.69
SHROOM4-205ENST00000484922 METRNQ9UJH8 293 aa4.48□□□□□ -1.69
SHROOM4-205ENST00000484922 ATN1P54259 1190 aaPredicted RBP4.47□□□□□ -1.69
SHROOM4-205ENST00000484922 PROM2Q8N271 834 aa4.47□□□□□ -1.69
SHROOM4-205ENST00000484922 TRPC6Q9Y210 931 aa4.47□□□□□ -1.69
SHROOM4-205ENST00000484922 CCDC61Q9Y6R9 512 aa4.47□□□□□ -1.69
SHROOM4-205ENST00000484922 DNMBPQ6XZF7 1577 aa4.47□□□□□ -1.69
SHROOM4-205ENST00000484922 C7P10643 843 aa4.46□□□□□ -1.7
SHROOM4-205ENST00000484922 MIER1Q8N108 512 aa4.46□□□□□ -1.7
SHROOM4-205ENST00000484922 KIF12Q96FN5 646 aa4.46□□□□□ -1.7
SHROOM4-205ENST00000484922 TOPBP1Q92547 1522 aa4.46□□□□□ -1.7
SHROOM4-205ENST00000484922 POTEFA5A3E0 1075 aa4.45□□□□□ -1.7
SHROOM4-205ENST00000484922 MAP3K13O43283 966 aa4.45□□□□□ -1.7
SHROOM4-205ENST00000484922 SLC39A7Q92504 469 aa4.45□□□□□ -1.7
SHROOM4-205ENST00000484922 FAM163AQ96GL9 167 aaPredicted RBP4.45□□□□□ -1.7
SHROOM4-205ENST00000484922 URB2Q14146 1524 aaKnown RBP4.45□□□□□ -1.7
SHROOM4-205ENST00000484922 RASEFQ8IZ41 740 aa4.44□□□□□ -1.7
SHROOM4-205ENST00000484922 IFT140Q96RY7 1462 aa4.43□□□□□ -1.7
SHROOM4-205ENST00000484922 WDR97A6NE52 1622 aa4.43□□□□□ -1.7
SHROOM4-205ENST00000484922 BIVM-ERCC5R4GMW8 1640 aa4.43□□□□□ -1.7
SHROOM4-205ENST00000484922 BMP2KQ9NSY1 1161 aaPredicted RBP4.43□□□□□ -1.7
SHROOM4-205ENST00000484922 WRNQ14191 1432 aaPredicted RBP eCLIP4.43□□□□□ -1.7
SHROOM4-205ENST00000484922 TOP2BQ02880 1626 aa4.43□□□□□ -1.7
SHROOM4-205ENST00000484922 LCE2DQ5TA82 110 aaPredicted RBP4.42□□□□□ -1.7
SHROOM4-205ENST00000484922 CUX1P39880 1505 aa4.41□□□□□ -1.7
SHROOM4-205ENST00000484922 SOGA1O94964 1423 aa4.41□□□□□ -1.7
SHROOM4-205ENST00000484922 COLQQ9Y215 455 aaPredicted RBP4.41□□□□□ -1.7
SHROOM4-205ENST00000484922 POLA1P09884 1462 aaPredicted RBP4.41□□□□□ -1.7
SHROOM4-205ENST00000484922 FGD5Q6ZNL6 1462 aa4.41□□□□□ -1.7
SHROOM4-205ENST00000484922 TARBP1Q13395 1621 aaKnown RBP4.4□□□□□ -1.7
SHROOM4-205ENST00000484922 MAMSTRQ6ZN01 415 aa4.4□□□□□ -1.71
SHROOM4-205ENST00000484922 PBRM1Q86U86 1689 aa4.39□□□□□ -1.71
SHROOM4-205ENST00000484922 SYNJ1O43426 1573 aa4.39□□□□□ -1.71
SHROOM4-205ENST00000484922 EIF4G3O43432 1585 aaKnown RBP4.39□□□□□ -1.71
SHROOM4-205ENST00000484922 TTLL13PA6NNM8 815 aa4.38□□□□□ -1.71
SHROOM4-205ENST00000484922 PLCD3Q8N3E9 789 aa4.38□□□□□ -1.71
SHROOM4-205ENST00000484922 RAD54L2Q9Y4B4 1467 aa4.37□□□□□ -1.71
SHROOM4-205ENST00000484922 ABCA10Q8WWZ4 1543 aa4.37□□□□□ -1.71
SHROOM4-205ENST00000484922 PLEKHG5O94827 1062 aa4.37□□□□□ -1.71
SHROOM4-205ENST00000484922 SEC24BO95487 1268 aa4.37□□□□□ -1.71
SHROOM4-205ENST00000484922 TIE1P35590 1138 aa4.37□□□□□ -1.71
SHROOM4-205ENST00000484922 NUBP1P53384 320 aa4.37□□□□□ -1.71
SHROOM4-205ENST00000484922 SCUBE2Q9NQ36 999 aa4.37□□□□□ -1.71
SHROOM4-205ENST00000484922 GRIN2BQ13224 1484 aa4.37□□□□□ -1.71
SHROOM4-205ENST00000484922 GAPVD1Q14C86 1478 aa4.37□□□□□ -1.71
SHROOM4-205ENST00000484922 TRIM41Q8WV44 630 aa4.36□□□□□ -1.71
SHROOM4-205ENST00000484922 TRIM35Q9UPQ4 493 aa4.36□□□□□ -1.71
SHROOM4-205ENST00000484922 PCDHB13Q9Y5F0 798 aa4.36□□□□□ -1.71
SHROOM4-205ENST00000484922 AQRO60306 1485 aaKnown RBP eCLIP4.36□□□□□ -1.71
SHROOM4-205ENST00000484922 MAGI1Q96QZ7 1491 aaPredicted RBP4.36□□□□□ -1.71
SHROOM4-205ENST00000484922 ZNF608Q9ULD9 1512 aaPredicted RBP4.36□□□□□ -1.71
SHROOM4-205ENST00000484922 ABCA5Q8WWZ7 1642 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms