RNA–Protein interactions for RNA: ENST00000484910.1

RD3-202, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

TSL 1 (best)

Gene RD3, Length 3,070 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-202ENST00000484910 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
RD3-202ENST00000484910 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
RD3-202ENST00000484910 FAM50AQ14320 339 aaKnown RBP16.71■□□□□ 0.27
RD3-202ENST00000484910 FHOD3Q2V2M9 1422 aa16.7■□□□□ 0.26
RD3-202ENST00000484910 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
RD3-202ENST00000484910 PDS5BQ9NTI5 1447 aa16.65■□□□□ 0.26
RD3-202ENST00000484910 ABCA10Q8WWZ4 1543 aa16.61■□□□□ 0.25
RD3-202ENST00000484910 KIF21AQ7Z4S6 1674 aa16.61■□□□□ 0.25
RD3-202ENST00000484910 AQRO60306 1485 aaKnown RBP eCLIP16.6■□□□□ 0.25
RD3-202ENST00000484910 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
RD3-202ENST00000484910 FBLN2P98095 1184 aa16.58■□□□□ 0.24
RD3-202ENST00000484910 GAPVD1Q14C86 1478 aa16.57■□□□□ 0.24
RD3-202ENST00000484910 CCNB3Q8WWL7 1395 aa16.56■□□□□ 0.24
RD3-202ENST00000484910 PHLDB1Q86UU1 1377 aa16.53■□□□□ 0.24
RD3-202ENST00000484910 PCF11O94913 1555 aaKnown RBP16.49■□□□□ 0.23
RD3-202ENST00000484910 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
RD3-202ENST00000484910 TIAM1Q13009 1591 aa16.46■□□□□ 0.23
RD3-202ENST00000484910 ZNF608Q9ULD9 1512 aaPredicted RBP16.46■□□□□ 0.23
RD3-202ENST00000484910 LRRC9Q6ZRR7 1453 aa16.46■□□□□ 0.23
RD3-202ENST00000484910 FHAD1B1AJZ9 1412 aa16.46■□□□□ 0.23
RD3-202ENST00000484910 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
RD3-202ENST00000484910 SUPT16HQ9Y5B9 1047 aaKnown RBP16.45■□□□□ 0.22
RD3-202ENST00000484910 RRBP1Q9P2E9 1410 aaKnown RBP16.44■□□□□ 0.22
RD3-202ENST00000484910 MTUS2Q5JR59 1369 aa16.43■□□□□ 0.22
RD3-202ENST00000484910 RAB3GAP2Q9H2M9 1393 aa16.42■□□□□ 0.22
RD3-202ENST00000484910 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
RD3-202ENST00000484910 CHIC2Q9UKJ5 165 aa16.42■□□□□ 0.22
RD3-202ENST00000484910 CUL7Q14999 1698 aa16.39■□□□□ 0.21
RD3-202ENST00000484910 ABCA5Q8WWZ7 1642 aa16.39■□□□□ 0.21
RD3-202ENST00000484910 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
RD3-202ENST00000484910 CLSPNQ9HAW4 1339 aa16.38■□□□□ 0.21
RD3-202ENST00000484910 BCANQ96GW7 911 aa16.38■□□□□ 0.21
RD3-202ENST00000484910 BCL11AQ9H165 835 aa16.37■□□□□ 0.21
RD3-202ENST00000484910 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
RD3-202ENST00000484910 KCNH8Q96L42 1107 aa16.36■□□□□ 0.21
RD3-202ENST00000484910 TARBP1Q13395 1621 aaKnown RBP16.36■□□□□ 0.21
RD3-202ENST00000484910 HIRIP3Q9BW71 556 aaPredicted RBP16.35■□□□□ 0.21
RD3-202ENST00000484910 CTTNBP2Q8WZ74 1663 aa16.35■□□□□ 0.21
RD3-202ENST00000484910 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
RD3-202ENST00000484910 FMN1Q68DA7 1419 aa16.34■□□□□ 0.21
RD3-202ENST00000484910 CASKIN1Q8WXD9 1431 aa16.34■□□□□ 0.21
RD3-202ENST00000484910 RRP7BPQ9NSQ0 103 aa16.33■□□□□ 0.2
RD3-202ENST00000484910 FYCO1Q9BQS8 1478 aa16.3■□□□□ 0.2
RD3-202ENST00000484910 SETD5Q9C0A6 1442 aa16.29■□□□□ 0.2
RD3-202ENST00000484910 EFCAB5A4FU69 1503 aa16.29■□□□□ 0.2
RD3-202ENST00000484910 DDX10Q13206 875 aaKnown RBP16.27■□□□□ 0.2
RD3-202ENST00000484910 GRIN2BQ13224 1484 aa16.27■□□□□ 0.2
RD3-202ENST00000484910 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.2
RD3-202ENST00000484910 TSHZ2Q9NRE2 1034 aa16.27■□□□□ 0.2
RD3-202ENST00000484910 ANP32EQ9BTT0 268 aa16.27■□□□□ 0.19
RD3-202ENST00000484910 PBRM1Q86U86 1689 aa16.25■□□□□ 0.19
RD3-202ENST00000484910 CDK13Q14004 1512 aaKnown RBP16.25■□□□□ 0.19
RD3-202ENST00000484910 TRIM52Q96A61 297 aa16.23■□□□□ 0.19
RD3-202ENST00000484910 CFAP43Q8NDM7 1665 aa16.23■□□□□ 0.19
RD3-202ENST00000484910 FGD6Q6ZV73 1430 aa16.23■□□□□ 0.19
RD3-202ENST00000484910 ZNF777Q9ULD5 760 aaPredicted RBP16.22■□□□□ 0.19
RD3-202ENST00000484910 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
RD3-202ENST00000484910 PTPRKQ15262 1439 aa16.22■□□□□ 0.19
RD3-202ENST00000484910 MAP3K1Q13233 1512 aa16.21■□□□□ 0.19
RD3-202ENST00000484910 FKBP8Q14318 412 aa16.21■□□□□ 0.19
RD3-202ENST00000484910 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
RD3-202ENST00000484910 LRRIQ1Q96JM4 1722 aa16.2■□□□□ 0.18
RD3-202ENST00000484910 ZNF644Q9H582 1327 aaPredicted RBP16.2■□□□□ 0.18
RD3-202ENST00000484910 ADAMTS12P58397 1594 aa16.2■□□□□ 0.18
RD3-202ENST00000484910 IQGAP2Q13576 1575 aa16.2■□□□□ 0.18
RD3-202ENST00000484910 FOXD1Q16676 465 aa16.19■□□□□ 0.18
RD3-202ENST00000484910 MAGI3Q5TCQ9 1506 aa16.19■□□□□ 0.18
RD3-202ENST00000484910 SAMD9Q5K651 1589 aa16.19■□□□□ 0.18
RD3-202ENST00000484910 MAPKBP1O60336 1514 aa16.16■□□□□ 0.18
RD3-202ENST00000484910 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
RD3-202ENST00000484910 WDR62O43379 1518 aa16.15■□□□□ 0.18
RD3-202ENST00000484910 NEFLP07196 543 aa16.14■□□□□ 0.17
RD3-202ENST00000484910 JPH4Q96JJ6 628 aa16.14■□□□□ 0.17
RD3-202ENST00000484910 MYOM3Q5VTT5 1437 aa16.13■□□□□ 0.17
RD3-202ENST00000484910 EPRSP07814 1512 aaKnown RBP16.12■□□□□ 0.17
RD3-202ENST00000484910 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
RD3-202ENST00000484910 THOC2Q8NI27 1593 aaKnown RBP16.11■□□□□ 0.17
RD3-202ENST00000484910 CCDC18Q5T9S5 1454 aa16.09■□□□□ 0.17
RD3-202ENST00000484910 PLB1Q6P1J6 1458 aa16.09■□□□□ 0.17
RD3-202ENST00000484910 DISP1Q96F81 1524 aa16.07■□□□□ 0.16
RD3-202ENST00000484910 KIAA0586Q9BVV6 1533 aa16.07■□□□□ 0.16
RD3-202ENST00000484910 PRG4Q92954 1404 aaPredicted RBP16.06■□□□□ 0.16
RD3-202ENST00000484910 ANP32CO43423 234 aa16.06■□□□□ 0.16
RD3-202ENST00000484910 SUPT6HQ7KZ85 1726 aaKnown RBP16.06■□□□□ 0.16
RD3-202ENST00000484910 TONSLQ96HA7 1378 aa16.05■□□□□ 0.16
RD3-202ENST00000484910 EHBP1L1Q8N3D4 1523 aa16.05■□□□□ 0.16
RD3-202ENST00000484910 HECW1Q76N89 1606 aa16.04■□□□□ 0.16
RD3-202ENST00000484910 NAIPQ13075 1403 aa16.03■□□□□ 0.16
RD3-202ENST00000484910 CFDP1Q9UEE9 299 aaPredicted RBP16.03■□□□□ 0.16
RD3-202ENST00000484910 PTPN23Q9H3S7 1636 aa16.03■□□□□ 0.16
RD3-202ENST00000484910 CDK11AQ9UQ88 783 aaPredicted RBP16.03■□□□□ 0.16
RD3-202ENST00000484910 CEP170Q5SW79 1584 aa16.02■□□□□ 0.15
RD3-202ENST00000484910 NUP153P49790 1475 aaKnown RBP16.01■□□□□ 0.15
RD3-202ENST00000484910 UGGT2Q9NYU1 1516 aa16.01■□□□□ 0.15
RD3-202ENST00000484910 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
RD3-202ENST00000484910 SYNJ2O15056 1496 aa16■□□□□ 0.15
RD3-202ENST00000484910 PPP1R15AO75807 674 aaPredicted RBP16■□□□□ 0.15
RD3-202ENST00000484910 HFM1A2PYH4 1435 aa15.99■□□□□ 0.15
RD3-202ENST00000484910 CNGB1Q14028 1251 aaPredicted RBP15.98■□□□□ 0.15
RD3-202ENST00000484910 MAGI1Q96QZ7 1491 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms