RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 MAPK8IP2Q13387 824 aaPredicted RBP13.42□□□□□ -0.26
SND1-211ENST00000484767 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
SND1-211ENST00000484767 CCNB3Q8WWL7 1395 aa13.4□□□□□ -0.26
SND1-211ENST00000484767 CFAP43Q8NDM7 1665 aa13.4□□□□□ -0.26
SND1-211ENST00000484767 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.28
SND1-211ENST00000484767 YTHDC1Q96MU7 727 aaKnown RBP13.33□□□□□ -0.28
SND1-211ENST00000484767 FHAD1B1AJZ9 1412 aa13.32□□□□□ -0.28
SND1-211ENST00000484767 EFCAB5A4FU69 1503 aa13.3□□□□□ -0.28
SND1-211ENST00000484767 IGF1RP08069 1367 aa13.3□□□□□ -0.28
SND1-211ENST00000484767 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
SND1-211ENST00000484767 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
SND1-211ENST00000484767 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.29□□□□□ -0.284e-6■■■□□ 17.4
SND1-211ENST00000484767 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
SND1-211ENST00000484767 AQRO60306 1485 aaKnown RBP eCLIP13.28□□□□□ -0.284e-8■■■■■ 34.1
SND1-211ENST00000484767 MAPKBP1O60336 1514 aa13.28□□□□□ -0.28
SND1-211ENST00000484767 CUL7Q14999 1698 aa13.28□□□□□ -0.28
SND1-211ENST00000484767 CADPSQ9ULU8 1353 aa13.27□□□□□ -0.29
SND1-211ENST00000484767 SETD5Q9C0A6 1442 aa13.27□□□□□ -0.29
SND1-211ENST00000484767 CARMIL1Q5VZK9 1371 aa13.26□□□□□ -0.29
SND1-211ENST00000484767 CTTNBP2Q8WZ74 1663 aa13.26□□□□□ -0.29
SND1-211ENST00000484767 FGD5Q6ZNL6 1462 aa13.25□□□□□ -0.29
SND1-211ENST00000484767 FYCO1Q9BQS8 1478 aa13.24□□□□□ -0.29
SND1-211ENST00000484767 RAB3GAP2Q9H2M9 1393 aa13.24□□□□□ -0.29
SND1-211ENST00000484767 RANGAP1P46060 587 aaPredicted RBP13.24□□□□□ -0.29
SND1-211ENST00000484767 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
SND1-211ENST00000484767 DNMBPQ6XZF7 1577 aa13.23□□□□□ -0.29
SND1-211ENST00000484767 CNKSR2Q8WXI2 1034 aa13.21□□□□□ -0.29
SND1-211ENST00000484767 ABCA10Q8WWZ4 1543 aa13.2□□□□□ -0.3
SND1-211ENST00000484767 CASKIN1Q8WXD9 1431 aa13.19□□□□□ -0.3
SND1-211ENST00000484767 KIF21AQ7Z4S6 1674 aa13.18□□□□□ -0.3
SND1-211ENST00000484767 WDR97A6NE52 1622 aa13.17□□□□□ -0.3
SND1-211ENST00000484767 THOC2Q8NI27 1593 aaKnown RBP13.16□□□□□ -0.3
SND1-211ENST00000484767 KCNA4P22459 653 aa13.15□□□□□ -0.3
SND1-211ENST00000484767 SUPT16HQ9Y5B9 1047 aaKnown RBP13.15□□□□□ -0.3
SND1-211ENST00000484767 PHLDB1Q86UU1 1377 aa13.15□□□□□ -0.3
SND1-211ENST00000484767 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
SND1-211ENST00000484767 FANCD2Q9BXW9 1451 aa13.13□□□□□ -0.31
SND1-211ENST00000484767 FMN1Q68DA7 1419 aa13.13□□□□□ -0.31
SND1-211ENST00000484767 ERCC6Q03468 1493 aa13.12□□□□□ -0.31
SND1-211ENST00000484767 SAMD9Q5K651 1589 aa13.11□□□□□ -0.31
SND1-211ENST00000484767 TOPBP1Q92547 1522 aa13.1□□□□□ -0.31
SND1-211ENST00000484767 CCER2I3L3R5 266 aa13.08□□□□□ -0.32
SND1-211ENST00000484767 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
SND1-211ENST00000484767 SUPT6HQ7KZ85 1726 aaKnown RBP13.07□□□□□ -0.32
SND1-211ENST00000484767 LAMC3Q9Y6N6 1575 aa13.07□□□□□ -0.32
SND1-211ENST00000484767 FGD6Q6ZV73 1430 aa13.06□□□□□ -0.32
SND1-211ENST00000484767 SNAPC4Q5SXM2 1469 aa13.06□□□□□ -0.32
SND1-211ENST00000484767 ABCA5Q8WWZ7 1642 aa13.06□□□□□ -0.32
SND1-211ENST00000484767 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
SND1-211ENST00000484767 HFM1A2PYH4 1435 aa13.05□□□□□ -0.32
SND1-211ENST00000484767 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
SND1-211ENST00000484767 ITGAEP38570 1179 aa13.04□□□□□ -0.32
SND1-211ENST00000484767 FHOD3Q2V2M9 1422 aa13.04□□□□□ -0.32
SND1-211ENST00000484767 UACAQ9BZF9 1416 aa13.04□□□□□ -0.32
SND1-211ENST00000484767 GCC2Q8IWJ2 1684 aa13.03□□□□□ -0.32
SND1-211ENST00000484767 LRRIQ1Q96JM4 1722 aa13.03□□□□□ -0.32
SND1-211ENST00000484767 PPP1R15AO75807 674 aaPredicted RBP13.03□□□□□ -0.32
SND1-211ENST00000484767 FAM50AQ14320 339 aaKnown RBP13.02□□□□□ -0.33
SND1-211ENST00000484767 CCDC18Q5T9S5 1454 aa13.02□□□□□ -0.33
SND1-211ENST00000484767 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
SND1-211ENST00000484767 GRIN2BQ13224 1484 aa13.01□□□□□ -0.33
SND1-211ENST00000484767 AKNAQ7Z591 1439 aa13□□□□□ -0.33
SND1-211ENST00000484767 HECW1Q76N89 1606 aa12.99□□□□□ -0.33
SND1-211ENST00000484767 ARHGEF11O15085 1522 aa12.99□□□□□ -0.33
SND1-211ENST00000484767 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
SND1-211ENST00000484767 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
SND1-211ENST00000484767 RNF216Q9NWF9 866 aaPredicted RBP12.99□□□□□ -0.33
SND1-211ENST00000484767 MYOM3Q5VTT5 1437 aa12.98□□□□□ -0.33
SND1-211ENST00000484767 TCOF1Q13428 1488 aaKnown RBP12.97□□□□□ -0.33
SND1-211ENST00000484767 TONSLQ96HA7 1378 aa12.97□□□□□ -0.33
SND1-211ENST00000484767 UGGT2Q9NYU1 1516 aa12.97□□□□□ -0.33
SND1-211ENST00000484767 ANP32CO43423 234 aa12.96□□□□□ -0.33
SND1-211ENST00000484767 SIN3AQ96ST3 1273 aa12.96□□□□□ -0.33
SND1-211ENST00000484767 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
SND1-211ENST00000484767 MTUS2Q5JR59 1369 aa12.95□□□□□ -0.34
SND1-211ENST00000484767 NCOA2Q15596 1464 aa12.95□□□□□ -0.34
SND1-211ENST00000484767 DDX10Q13206 875 aaKnown RBP12.94□□□□□ -0.34
SND1-211ENST00000484767 NAIPQ13075 1403 aa12.94□□□□□ -0.34
SND1-211ENST00000484767 NEFLP07196 543 aa12.93□□□□□ -0.34
SND1-211ENST00000484767 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
SND1-211ENST00000484767 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
SND1-211ENST00000484767 KDM5BQ9UGL1 1544 aa12.91□□□□□ -0.34
SND1-211ENST00000484767 POLR1AO95602 1720 aaPredicted RBP12.91□□□□□ -0.34
SND1-211ENST00000484767 PBRM1Q86U86 1689 aa12.9□□□□□ -0.34
SND1-211ENST00000484767 MIA2Q96PC5 1412 aa12.89□□□□□ -0.35
SND1-211ENST00000484767 PTPRKQ15262 1439 aa12.88□□□□□ -0.35
SND1-211ENST00000484767 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
SND1-211ENST00000484767 P3H3Q8IVL6 736 aa12.88□□□□□ -0.35
SND1-211ENST00000484767 PDS5BQ9NTI5 1447 aa12.88□□□□□ -0.35
SND1-211ENST00000484767 KCNH8Q96L42 1107 aa12.87□□□□□ -0.35
SND1-211ENST00000484767 ATP1B4Q9UN42 357 aaPredicted RBP12.87□□□□□ -0.35
SND1-211ENST00000484767 ANP32EQ9BTT0 268 aa12.86□□□□□ -0.35
SND1-211ENST00000484767 NESP48681 1621 aa12.85□□□□□ -0.35
SND1-211ENST00000484767 FKBP8Q14318 412 aa12.85□□□□□ -0.35
SND1-211ENST00000484767 ERICH6BQ5W0A0 696 aa12.85□□□□□ -0.35
SND1-211ENST00000484767 IQGAP2Q13576 1575 aa12.85□□□□□ -0.35
SND1-211ENST00000484767 WDR62O43379 1518 aa12.82□□□□□ -0.36
SND1-211ENST00000484767 MAGI3Q5TCQ9 1506 aa12.82□□□□□ -0.36
SND1-211ENST00000484767 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
SND1-211ENST00000484767 EPRSP07814 1512 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms