RNA–Protein interactions for RNA: ENST00000484746.1

ATP2B4-207, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best)

Gene ATP2B4, Length 4,697 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-207ENST00000484746 TOP2BQ02880 1626 aa7.99□□□□□ -1.13
ATP2B4-207ENST00000484746 PLEKHD1A6NEE1 506 aa7.99□□□□□ -1.13
ATP2B4-207ENST00000484746 POLR3GLQ9BT43 218 aa7.99□□□□□ -1.13
ATP2B4-207ENST00000484746 NPM1P06748 294 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATP2B4-207ENST00000484746 BCANQ96GW7 911 aa7.98□□□□□ -1.13
ATP2B4-207ENST00000484746 FMN1Q68DA7 1419 aa7.98□□□□□ -1.13
ATP2B4-207ENST00000484746 CHIC2Q9UKJ5 165 aa7.98□□□□□ -1.13
ATP2B4-207ENST00000484746 CCNB3Q8WWL7 1395 aa7.97□□□□□ -1.13
ATP2B4-207ENST00000484746 KIF21BO75037 1637 aa7.97□□□□□ -1.13
ATP2B4-207ENST00000484746 RAD54L2Q9Y4B4 1467 aa7.97□□□□□ -1.13
ATP2B4-207ENST00000484746 CUX1P39880 1505 aa7.96□□□□□ -1.13
ATP2B4-207ENST00000484746 TONSLQ96HA7 1378 aa7.96□□□□□ -1.14
ATP2B4-207ENST00000484746 NEFLP07196 543 aa7.96□□□□□ -1.14
ATP2B4-207ENST00000484746 TSPY4P0CV99 314 aa7.96□□□□□ -1.14
ATP2B4-207ENST00000484746 TSPY10P0CW01 314 aa7.96□□□□□ -1.14
ATP2B4-207ENST00000484746 NESP48681 1621 aa7.96□□□□□ -1.14
ATP2B4-207ENST00000484746 KANK4Q5T7N3 995 aaPredicted RBP7.96□□□□□ -1.14
ATP2B4-207ENST00000484746 GAPVD1Q14C86 1478 aa7.95□□□□□ -1.14
ATP2B4-207ENST00000484746 ERICH3Q5RHP9 1530 aa7.95□□□□□ -1.14
ATP2B4-207ENST00000484746 CARMIL2Q6F5E8 1435 aa7.94□□□□□ -1.14
ATP2B4-207ENST00000484746 FHOD3Q2V2M9 1422 aa7.93□□□□□ -1.14
ATP2B4-207ENST00000484746 TOPBP1Q92547 1522 aa7.93□□□□□ -1.14
ATP2B4-207ENST00000484746 ZNF326Q5BKZ1 582 aaKnown RBP7.93□□□□□ -1.14
ATP2B4-207ENST00000484746 CFDP1Q9UEE9 299 aaPredicted RBP7.93□□□□□ -1.14
ATP2B4-207ENST00000484746 CLSPNQ9HAW4 1339 aa7.93□□□□□ -1.14
ATP2B4-207ENST00000484746 RRP7BPQ9NSQ0 103 aa7.93□□□□□ -1.14
ATP2B4-207ENST00000484746 ARHGAP35Q9NRY4 1499 aa7.92□□□□□ -1.14
ATP2B4-207ENST00000484746 PRXQ9BXM0 1461 aa7.92□□□□□ -1.14
ATP2B4-207ENST00000484746 DNMBPQ6XZF7 1577 aa7.91□□□□□ -1.14
ATP2B4-207ENST00000484746 LAMC3Q9Y6N6 1575 aa7.91□□□□□ -1.14
ATP2B4-207ENST00000484746 ANP32EQ9BTT0 268 aa7.91□□□□□ -1.14
ATP2B4-207ENST00000484746 ANP32CO43423 234 aa7.9□□□□□ -1.14
ATP2B4-207ENST00000484746 POLA1P09884 1462 aaPredicted RBP7.9□□□□□ -1.15
ATP2B4-207ENST00000484746 MRC2Q9UBG0 1479 aa7.9□□□□□ -1.15
ATP2B4-207ENST00000484746 KCNH8Q96L42 1107 aa7.89□□□□□ -1.15
ATP2B4-207ENST00000484746 SUPT16HQ9Y5B9 1047 aaKnown RBP7.89□□□□□ -1.15
ATP2B4-207ENST00000484746 TSHZ2Q9NRE2 1034 aa7.88□□□□□ -1.15
ATP2B4-207ENST00000484746 JPH4Q96JJ6 628 aa7.87□□□□□ -1.15
ATP2B4-207ENST00000484746 SLC4A1APQ9BWU0 796 aaKnown RBP7.87□□□□□ -1.15
ATP2B4-207ENST00000484746 SETD5Q9C0A6 1442 aa7.87□□□□□ -1.15
ATP2B4-207ENST00000484746 AQRO60306 1485 aaKnown RBP eCLIP7.87□□□□□ -1.152e-8■■■■□ 25.4
ATP2B4-207ENST00000484746 GRIN2BQ13224 1484 aa7.87□□□□□ -1.15
ATP2B4-207ENST00000484746 CNGB1Q14028 1251 aaPredicted RBP7.87□□□□□ -1.15
ATP2B4-207ENST00000484746 BIVM-ERCC5R4GMW8 1640 aa7.86□□□□□ -1.15
ATP2B4-207ENST00000484746 IFT140Q96RY7 1462 aa7.86□□□□□ -1.15
ATP2B4-207ENST00000484746 ABCA10Q8WWZ4 1543 aa7.85□□□□□ -1.15
ATP2B4-207ENST00000484746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.85□□□□□ -1.15
ATP2B4-207ENST00000484746 DNAJC5BQ9UF47 199 aa7.84□□□□□ -1.16
ATP2B4-207ENST00000484746 CCDC18Q5T9S5 1454 aa7.83□□□□□ -1.16
ATP2B4-207ENST00000484746 ARAP1Q96P48 1450 aa7.83□□□□□ -1.16
ATP2B4-207ENST00000484746 TIMELESSQ9UNS1 1208 aa7.82□□□□□ -1.16
ATP2B4-207ENST00000484746 RAB3GAP2Q9H2M9 1393 aa7.81□□□□□ -1.16
ATP2B4-207ENST00000484746 EFCAB5A4FU69 1503 aa7.81□□□□□ -1.16
ATP2B4-207ENST00000484746 CASKIN1Q8WXD9 1431 aa7.81□□□□□ -1.16
ATP2B4-207ENST00000484746 DDX10Q13206 875 aaKnown RBP7.81□□□□□ -1.16
ATP2B4-207ENST00000484746 SIN3AQ96ST3 1273 aa7.8□□□□□ -1.16
ATP2B4-207ENST00000484746 URB2Q14146 1524 aaKnown RBP7.79□□□□□ -1.16
ATP2B4-207ENST00000484746 EIF4G2P78344 907 aaKnown RBP eCLIP7.79□□□□□ -1.16
ATP2B4-207ENST00000484746 FKBP8Q14318 412 aa7.79□□□□□ -1.16
ATP2B4-207ENST00000484746 PTPRGP23470 1445 aa7.78□□□□□ -1.16
ATP2B4-207ENST00000484746 LRRC9Q6ZRR7 1453 aa7.78□□□□□ -1.16
ATP2B4-207ENST00000484746 FYCO1Q9BQS8 1478 aa7.78□□□□□ -1.16
ATP2B4-207ENST00000484746 CUL7Q14999 1698 aa7.78□□□□□ -1.16
ATP2B4-207ENST00000484746 ESF1Q9H501 851 aaKnown RBP7.78□□□□□ -1.16
ATP2B4-207ENST00000484746 CHGAP10645 457 aaKnown RBP7.77□□□□□ -1.17
ATP2B4-207ENST00000484746 KDM2AQ9Y2K7 1162 aa7.77□□□□□ -1.17
ATP2B4-207ENST00000484746 EFCAB2Q5VUJ9 269 aa7.76□□□□□ -1.17
ATP2B4-207ENST00000484746 SNAPC4Q5SXM2 1469 aa7.75□□□□□ -1.17
ATP2B4-207ENST00000484746 ANKRD30AQ9BXX3 1397 aa7.75□□□□□ -1.17
ATP2B4-207ENST00000484746 RSPH4AQ5TD94 716 aa7.75□□□□□ -1.17
ATP2B4-207ENST00000484746 DHX57Q6P158 1386 aaKnown RBP7.74□□□□□ -1.17
ATP2B4-207ENST00000484746 FGD6Q6ZV73 1430 aa7.74□□□□□ -1.17
ATP2B4-207ENST00000484746 HIRIP3Q9BW71 556 aaPredicted RBP7.74□□□□□ -1.17
ATP2B4-207ENST00000484746 PHLDB1Q86UU1 1377 aa7.74□□□□□ -1.17
ATP2B4-207ENST00000484746 MYOM3Q5VTT5 1437 aa7.74□□□□□ -1.17
ATP2B4-207ENST00000484746 RRBP1Q9P2E9 1410 aaKnown RBP7.73□□□□□ -1.17
ATP2B4-207ENST00000484746 STAG3Q9UJ98 1225 aa7.73□□□□□ -1.17
ATP2B4-207ENST00000484746 MPHOSPH9Q99550 1183 aa7.73□□□□□ -1.17
ATP2B4-207ENST00000484746 KIAA0586Q9BVV6 1533 aa7.73□□□□□ -1.17
ATP2B4-207ENST00000484746 TIAM1Q13009 1591 aa7.72□□□□□ -1.17
ATP2B4-207ENST00000484746 RBM19Q9Y4C8 960 aaKnown RBP7.72□□□□□ -1.17
ATP2B4-207ENST00000484746 RGL3Q3MIN7 710 aa7.71□□□□□ -1.17
ATP2B4-207ENST00000484746 NCOA2Q15596 1464 aa7.71□□□□□ -1.17
ATP2B4-207ENST00000484746 PRDM2Q13029 1718 aa7.71□□□□□ -1.18
ATP2B4-207ENST00000484746 PKD2Q13563 968 aa7.7□□□□□ -1.18
ATP2B4-207ENST00000484746 IQGAP2Q13576 1575 aa7.7□□□□□ -1.18
ATP2B4-207ENST00000484746 HNRNPMP52272 730 aaKnown RBP eCLIP7.7□□□□□ -1.18
ATP2B4-207ENST00000484746 OSCARQ8IYS5 282 aa7.7□□□□□ -1.18
ATP2B4-207ENST00000484746 MAGI1Q96QZ7 1491 aaPredicted RBP7.7□□□□□ -1.18
ATP2B4-207ENST00000484746 KANK1Q14678 1352 aa7.7□□□□□ -1.18
ATP2B4-207ENST00000484746 MAP3K1Q13233 1512 aa7.69□□□□□ -1.18
ATP2B4-207ENST00000484746 NUP155O75694 1391 aa7.69□□□□□ -1.18
ATP2B4-207ENST00000484746 EHBP1L1Q8N3D4 1523 aa7.69□□□□□ -1.18
ATP2B4-207ENST00000484746 IRX6P78412 446 aaPredicted RBP7.69□□□□□ -1.18
ATP2B4-207ENST00000484746 SYNJ2O15056 1496 aa7.69□□□□□ -1.18
ATP2B4-207ENST00000484746 PRG4Q92954 1404 aaPredicted RBP7.69□□□□□ -1.18
ATP2B4-207ENST00000484746 PPP1R15AO75807 674 aaPredicted RBP7.69□□□□□ -1.18
ATP2B4-207ENST00000484746 HECW1Q76N89 1606 aa7.68□□□□□ -1.18
ATP2B4-207ENST00000484746 CARD11Q9BXL7 1154 aa7.68□□□□□ -1.18
ATP2B4-207ENST00000484746 GRIN2AQ12879 1464 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms