RNA–Protein interactions for RNA: ENST00000484213.1

ABCD3-205, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best)

Gene ABCD3, Length 4,367 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-205ENST00000484213 SAMD1Q6SPF0 538 aaPredicted RBP6.9□□□□□ -1.31
ABCD3-205ENST00000484213 WRNQ14191 1432 aaPredicted RBP eCLIP6.89□□□□□ -1.31
ABCD3-205ENST00000484213 CARMIL2Q6F5E8 1435 aa6.89□□□□□ -1.31
ABCD3-205ENST00000484213 SOGA1O94964 1423 aa6.88□□□□□ -1.31
ABCD3-205ENST00000484213 BCANQ96GW7 911 aa6.87□□□□□ -1.31
ABCD3-205ENST00000484213 PRDM2Q13029 1718 aa6.87□□□□□ -1.31
ABCD3-205ENST00000484213 TULP1O00294 542 aaPredicted RBP6.85□□□□□ -1.31
ABCD3-205ENST00000484213 NESP48681 1621 aa6.84□□□□□ -1.31
ABCD3-205ENST00000484213 TOPBP1Q92547 1522 aa6.83□□□□□ -1.32
ABCD3-205ENST00000484213 ECM2O94769 699 aaPredicted RBP6.83□□□□□ -1.32
ABCD3-205ENST00000484213 ZBTB22O15209 634 aa6.83□□□□□ -1.32
ABCD3-205ENST00000484213 TPRNQ4KMQ1 711 aa6.83□□□□□ -1.32
ABCD3-205ENST00000484213 SYNJ2O15056 1496 aa6.83□□□□□ -1.32
ABCD3-205ENST00000484213 ABCB7O75027 752 aa6.81□□□□□ -1.32
ABCD3-205ENST00000484213 KIF21AQ7Z4S6 1674 aa6.81□□□□□ -1.32
ABCD3-205ENST00000484213 FHAD1B1AJZ9 1412 aa6.8□□□□□ -1.32
ABCD3-205ENST00000484213 CHGAP10645 457 aaKnown RBP6.8□□□□□ -1.32
ABCD3-205ENST00000484213 RNF216Q9NWF9 866 aaPredicted RBP6.8□□□□□ -1.32
ABCD3-205ENST00000484213 PHLDB1Q86UU1 1377 aa6.79□□□□□ -1.32
ABCD3-205ENST00000484213 SPDYE4A6NLX3 237 aa6.79□□□□□ -1.32
ABCD3-205ENST00000484213 RANGAP1P46060 587 aaPredicted RBP6.79□□□□□ -1.32
ABCD3-205ENST00000484213 KIF27Q86VH2 1401 aa6.79□□□□□ -1.32
ABCD3-205ENST00000484213 CYB5RLQ6IPT4 315 aa6.78□□□□□ -1.32
ABCD3-205ENST00000484213 CCDC88BA6NC98 1476 aa6.78□□□□□ -1.32
ABCD3-205ENST00000484213 GAPVD1Q14C86 1478 aa6.78□□□□□ -1.32
ABCD3-205ENST00000484213 GOLGA3Q08378 1498 aa6.78□□□□□ -1.32
ABCD3-205ENST00000484213 CDK11AQ9UQ88 783 aaPredicted RBP6.78□□□□□ -1.32
ABCD3-205ENST00000484213 TEX14Q8IWB6 1497 aa6.77□□□□□ -1.33
ABCD3-205ENST00000484213 WDR70Q9NW82 654 aa6.76□□□□□ -1.33
ABCD3-205ENST00000484213 CLEC11AQ9Y240 323 aa6.76□□□□□ -1.33
ABCD3-205ENST00000484213 WIZO95785 1651 aa6.75□□□□□ -1.33
ABCD3-205ENST00000484213 URB2Q14146 1524 aaKnown RBP6.75□□□□□ -1.33
ABCD3-205ENST00000484213 ERICH3Q5RHP9 1530 aa6.73□□□□□ -1.33
ABCD3-205ENST00000484213 ARHGEF11O15085 1522 aa6.73□□□□□ -1.33
ABCD3-205ENST00000484213 ABCA10Q8WWZ4 1543 aa6.73□□□□□ -1.33
ABCD3-205ENST00000484213 EEA1Q15075 1411 aa6.72□□□□□ -1.33
ABCD3-205ENST00000484213 PLB1Q6P1J6 1458 aa6.72□□□□□ -1.33
ABCD3-205ENST00000484213 PRKCSHP14314 528 aaPredicted RBP6.72□□□□□ -1.33
ABCD3-205ENST00000484213 POLA1P09884 1462 aaPredicted RBP6.72□□□□□ -1.33
ABCD3-205ENST00000484213 DCAF8Q5TAQ9 597 aa6.71□□□□□ -1.33
ABCD3-205ENST00000484213 ESF1Q9H501 851 aaKnown RBP6.71□□□□□ -1.33
ABCD3-205ENST00000484213 SNAPC4Q5SXM2 1469 aa6.71□□□□□ -1.33
ABCD3-205ENST00000484213 FGD5Q6ZNL6 1462 aa6.71□□□□□ -1.33
ABCD3-205ENST00000484213 EIF4G3O43432 1585 aaKnown RBP6.7□□□□□ -1.34
ABCD3-205ENST00000484213 POGZQ7Z3K3 1410 aa6.7□□□□□ -1.34
ABCD3-205ENST00000484213 SUPT5HO00267 1087 aaKnown RBP6.69□□□□□ -1.34
ABCD3-205ENST00000484213 TNIKQ9UKE5 1360 aa6.68□□□□□ -1.34
ABCD3-205ENST00000484213 TDRD9Q8NDG6 1382 aaKnown RBP6.67□□□□□ -1.34
ABCD3-205ENST00000484213 SPRYD3Q8NCJ5 442 aa6.67□□□□□ -1.34
ABCD3-205ENST00000484213 GRIN2AQ12879 1464 aa6.67□□□□□ -1.34
ABCD3-205ENST00000484213 JPH4Q96JJ6 628 aa6.66□□□□□ -1.34
ABCD3-205ENST00000484213 ZNF692Q9BU19 519 aaPredicted RBP6.66□□□□□ -1.34
ABCD3-205ENST00000484213 PTPRGP23470 1445 aa6.66□□□□□ -1.34
ABCD3-205ENST00000484213 CUL7Q14999 1698 aa6.66□□□□□ -1.34
ABCD3-205ENST00000484213 RIMBP3CA6NJZ7 1639 aa6.66□□□□□ -1.34
ABCD3-205ENST00000484213 RIMBP3BA6NNM3 1639 aa6.66□□□□□ -1.34
ABCD3-205ENST00000484213 RIMBP3Q9UFD9 1639 aa6.66□□□□□ -1.34
ABCD3-205ENST00000484213 C14orf37Q86TY3 774 aa6.66□□□□□ -1.34
ABCD3-205ENST00000484213 DMRT2Q9Y5R5 561 aa6.66□□□□□ -1.34
ABCD3-205ENST00000484213 KIAA0586Q9BVV6 1533 aa6.66□□□□□ -1.34
ABCD3-205ENST00000484213 ARID3AQ99856 593 aa6.66□□□□□ -1.34
ABCD3-205ENST00000484213 AQRO60306 1485 aaKnown RBP eCLIP6.65□□□□□ -1.35
ABCD3-205ENST00000484213 POLA2Q14181 598 aa6.64□□□□□ -1.35
ABCD3-205ENST00000484213 VASPP50552 380 aaPredicted RBP6.64□□□□□ -1.35
ABCD3-205ENST00000484213 ZNF608Q9ULD9 1512 aaPredicted RBP6.63□□□□□ -1.35
ABCD3-205ENST00000484213 NUP160Q12769 1436 aa6.63□□□□□ -1.35
ABCD3-205ENST00000484213 PLCB2Q00722 1185 aa6.63□□□□□ -1.35
ABCD3-205ENST00000484213 FAM69CQ0P6D2 419 aa6.63□□□□□ -1.35
ABCD3-205ENST00000484213 PRG4Q92954 1404 aaPredicted RBP6.62□□□□□ -1.35
ABCD3-205ENST00000484213 TOP2BQ02880 1626 aa6.62□□□□□ -1.35
ABCD3-205ENST00000484213 CARMIL1Q5VZK9 1371 aa6.61□□□□□ -1.35
ABCD3-205ENST00000484213 ZNF219Q9P2Y4 722 aaPredicted RBP6.6□□□□□ -1.35
ABCD3-205ENST00000484213 TARBP1Q13395 1621 aaKnown RBP6.6□□□□□ -1.35
ABCD3-205ENST00000484213 CLASP1Q7Z460 1538 aa6.6□□□□□ -1.35
ABCD3-205ENST00000484213 GOLGA2Q08379 1002 aa6.6□□□□□ -1.35
ABCD3-205ENST00000484213 TAOK2Q9UL54 1235 aa6.6□□□□□ -1.35
ABCD3-205ENST00000484213 PLEKHD1A6NEE1 506 aa6.59□□□□□ -1.35
ABCD3-205ENST00000484213 ACIN1Q9UKV3 1341 aaKnown RBP6.58□□□□□ -1.36
ABCD3-205ENST00000484213 ADAMTS12P58397 1594 aa6.58□□□□□ -1.36
ABCD3-205ENST00000484213 KRI1Q8N9T8 703 aaKnown RBP6.58□□□□□ -1.36
ABCD3-205ENST00000484213 CLIP1P30622 1438 aa6.58□□□□□ -1.36
ABCD3-205ENST00000484213 ZBTB47Q9UFB7 747 aaPredicted RBP6.58□□□□□ -1.36
ABCD3-205ENST00000484213 ARAP1Q96P48 1450 aa6.58□□□□□ -1.36
ABCD3-205ENST00000484213 UHRF1BP1LA0JNW5 1464 aa6.57□□□□□ -1.36
ABCD3-205ENST00000484213 ATXN8OSP0DMR3 200 aa6.57□□□□□ -1.36
ABCD3-205ENST00000484213 MAPKBP1O60336 1514 aa6.57□□□□□ -1.36
ABCD3-205ENST00000484213 STK25O00506 426 aa6.57□□□□□ -1.36
ABCD3-205ENST00000484213 SPOCK2Q92563 424 aa6.57□□□□□ -1.36
ABCD3-205ENST00000484213 CHD1O14646 1710 aa6.57□□□□□ -1.36
ABCD3-205ENST00000484213 RAPGEF2Q9Y4G8 1499 aa6.57□□□□□ -1.36
ABCD3-205ENST00000484213 BIVM-ERCC5R4GMW8 1640 aa6.56□□□□□ -1.36
ABCD3-205ENST00000484213 RAD54L2Q9Y4B4 1467 aa6.56□□□□□ -1.36
ABCD3-205ENST00000484213 PBRM1Q86U86 1689 aa6.56□□□□□ -1.36
ABCD3-205ENST00000484213 UACAQ9BZF9 1416 aa6.56□□□□□ -1.36
ABCD3-205ENST00000484213 ABCC10Q5T3U5 1492 aa6.55□□□□□ -1.36
ABCD3-205ENST00000484213 CUX1P39880 1505 aa6.55□□□□□ -1.36
ABCD3-205ENST00000484213 ABCA5Q8WWZ7 1642 aa6.54□□□□□ -1.36
ABCD3-205ENST00000484213 G3V3G9 751 aa6.54□□□□□ -1.36
ABCD3-205ENST00000484213 CEP170Q5SW79 1584 aa6.53□□□□□ -1.36
ABCD3-205ENST00000484213 ARID4BQ4LE39 1312 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms