RNA–Protein interactions for RNA: ENST00000483961.6

CDC23-207, Transcript of cell division cycle 23, humanhuman

TSL 4

Gene CDC23, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-207ENST00000483961 GOLGA3Q08378 1498 aa24.38■■□□□ 1.49
CDC23-207ENST00000483961 IQGAP2Q13576 1575 aa24.33■■□□□ 1.48
CDC23-207ENST00000483961 CTTNBP2Q8WZ74 1663 aa24.3■■□□□ 1.48
CDC23-207ENST00000483961 SHROOM2Q13796 1616 aa24.3■■□□□ 1.48
CDC23-207ENST00000483961 JPH4Q96JJ6 628 aa24.29■■□□□ 1.48
CDC23-207ENST00000483961 UBTFP17480 764 aaKnown RBP24.25■■□□□ 1.47
CDC23-207ENST00000483961 ARHGEF11O15085 1522 aa24.23■■□□□ 1.47
CDC23-207ENST00000483961 UGGT2Q9NYU1 1516 aa24.21■■□□□ 1.47
CDC23-207ENST00000483961 CARMIL2Q6F5E8 1435 aa24.21■■□□□ 1.47
CDC23-207ENST00000483961 PRG4Q92954 1404 aaPredicted RBP24.21■■□□□ 1.47
CDC23-207ENST00000483961 RIMBP3CA6NJZ7 1639 aa24.15■■□□□ 1.46
CDC23-207ENST00000483961 RIMBP3BA6NNM3 1639 aa24.15■■□□□ 1.46
CDC23-207ENST00000483961 RIMBP3Q9UFD9 1639 aa24.15■■□□□ 1.46
CDC23-207ENST00000483961 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
CDC23-207ENST00000483961 EHMT2Q96KQ7 1210 aa24.11■■□□□ 1.45
CDC23-207ENST00000483961 EFCAB5A4FU69 1503 aa24.08■■□□□ 1.45
CDC23-207ENST00000483961 DISP1Q96F81 1524 aa24.08■■□□□ 1.45
CDC23-207ENST00000483961 KIAA0556O60303 1618 aa24.06■■□□□ 1.44
CDC23-207ENST00000483961 ERCC6L2Q5T890 1561 aa24.04■■□□□ 1.44
CDC23-207ENST00000483961 ARAP1Q96P48 1450 aa24.03■■□□□ 1.44
CDC23-207ENST00000483961 SAMD9Q5K651 1589 aa24.03■■□□□ 1.44
CDC23-207ENST00000483961 PTPRGP23470 1445 aa24■■□□□ 1.43
CDC23-207ENST00000483961 CYB5RLQ6IPT4 315 aa23.96■■□□□ 1.43
CDC23-207ENST00000483961 RANGAP1P46060 587 aaPredicted RBP23.94■■□□□ 1.42
CDC23-207ENST00000483961 LOC105371045A0A1W2PR82 267 aa23.93■■□□□ 1.42
CDC23-207ENST00000483961 CLIP1P30622 1438 aa23.93■■□□□ 1.42
CDC23-207ENST00000483961 ARHGAP35Q9NRY4 1499 aa23.89■■□□□ 1.42
CDC23-207ENST00000483961 CEP162Q5TB80 1403 aa23.88■■□□□ 1.41
CDC23-207ENST00000483961 P3H3Q8IVL6 736 aa23.87■■□□□ 1.41
CDC23-207ENST00000483961 FMN1Q68DA7 1419 aa23.86■■□□□ 1.41
CDC23-207ENST00000483961 FHOD3Q2V2M9 1422 aa23.85■■□□□ 1.41
CDC23-207ENST00000483961 UACAQ9BZF9 1416 aa23.85■■□□□ 1.41
CDC23-207ENST00000483961 UHRF1BP1LA0JNW5 1464 aa23.84■■□□□ 1.41
CDC23-207ENST00000483961 TTBK1Q5TCY1 1321 aaPredicted RBP23.83■■□□□ 1.4
CDC23-207ENST00000483961 ABCC2Q92887 1545 aa23.79■■□□□ 1.4
CDC23-207ENST00000483961 NPM1P06748 294 aaKnown RBP eCLIP23.78■■□□□ 1.4
CDC23-207ENST00000483961 ABCA8O94911 1581 aa23.78■■□□□ 1.4
CDC23-207ENST00000483961 PLB1Q6P1J6 1458 aa23.75■■□□□ 1.39
CDC23-207ENST00000483961 ADCY10Q96PN6 1610 aa23.75■■□□□ 1.39
CDC23-207ENST00000483961 RAPGEF6Q8TEU7 1601 aa23.73■■□□□ 1.39
CDC23-207ENST00000483961 KDM5BQ9UGL1 1544 aa23.69■■□□□ 1.38
CDC23-207ENST00000483961 HECW1Q76N89 1606 aa23.66■■□□□ 1.38
CDC23-207ENST00000483961 CASKIN1Q8WXD9 1431 aa23.66■■□□□ 1.38
CDC23-207ENST00000483961 FYCO1Q9BQS8 1478 aa23.64■■□□□ 1.38
CDC23-207ENST00000483961 MAPKBP1O60336 1514 aa23.63■■□□□ 1.37
CDC23-207ENST00000483961 NUP153P49790 1475 aaKnown RBP23.62■■□□□ 1.37
CDC23-207ENST00000483961 VPS8Q8N3P4 1428 aa23.6■■□□□ 1.37
CDC23-207ENST00000483961 ZCCHC11Q5TAX3 1644 aaKnown RBP23.59■■□□□ 1.37
CDC23-207ENST00000483961 PCF11O94913 1555 aaKnown RBP23.58■■□□□ 1.37
CDC23-207ENST00000483961 CCDC18Q5T9S5 1454 aa23.58■■□□□ 1.37
CDC23-207ENST00000483961 ATP10BO94823 1461 aa23.56■■□□□ 1.36
CDC23-207ENST00000483961 ATP1B4Q9UN42 357 aaPredicted RBP23.56■■□□□ 1.36
CDC23-207ENST00000483961 CDK11AQ9UQ88 783 aaPredicted RBP23.55■■□□□ 1.36
CDC23-207ENST00000483961 EPRSP07814 1512 aaKnown RBP23.54■■□□□ 1.36
CDC23-207ENST00000483961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.53■■□□□ 1.36
CDC23-207ENST00000483961 HNRNPUL2Q1KMD3 747 aaKnown RBP23.53■■□□□ 1.36
CDC23-207ENST00000483961 ASXL2Q76L83 1435 aa23.52■■□□□ 1.36
CDC23-207ENST00000483961 WDR7Q9Y4E6 1490 aa23.49■■□□□ 1.35
CDC23-207ENST00000483961 PLEKHD1A6NEE1 506 aa23.48■■□□□ 1.35
CDC23-207ENST00000483961 ARID3CA6NKF2 412 aa23.47■■□□□ 1.35
CDC23-207ENST00000483961 CDK13Q14004 1512 aaKnown RBP23.45■■□□□ 1.34
CDC23-207ENST00000483961 ABCC10Q5T3U5 1492 aa23.44■■□□□ 1.34
CDC23-207ENST00000483961 APLP2Q06481 763 aa23.42■■□□□ 1.34
CDC23-207ENST00000483961 MAP3K1Q13233 1512 aa23.41■■□□□ 1.34
CDC23-207ENST00000483961 TRHP20396 242 aaPredicted RBP23.38■■□□□ 1.33
CDC23-207ENST00000483961 GLI2P10070 1586 aa23.38■■□□□ 1.33
CDC23-207ENST00000483961 DIP2BQ9P265 1576 aa23.38■■□□□ 1.33
CDC23-207ENST00000483961 TROQ12816 1431 aaPredicted RBP23.37■■□□□ 1.33
CDC23-207ENST00000483961 LRRIQ1Q96JM4 1722 aa23.36■■□□□ 1.33
CDC23-207ENST00000483961 FAM69CQ0P6D2 419 aa23.35■■□□□ 1.33
CDC23-207ENST00000483961 MTUS2Q5JR59 1369 aa23.34■■□□□ 1.33
CDC23-207ENST00000483961 TIAM1Q13009 1591 aa23.34■■□□□ 1.33
CDC23-207ENST00000483961 CFAP43Q8NDM7 1665 aa23.34■■□□□ 1.33
CDC23-207ENST00000483961 KCNH8Q96L42 1107 aa23.33■■□□□ 1.33
CDC23-207ENST00000483961 KIF14Q15058 1648 aa23.3■■□□□ 1.32
CDC23-207ENST00000483961 EHBP1L1Q8N3D4 1523 aa23.3■■□□□ 1.32
CDC23-207ENST00000483961 KIF13AQ9H1H9 1805 aa23.27■■□□□ 1.32
CDC23-207ENST00000483961 ABCA9Q8IUA7 1624 aa23.26■■□□□ 1.31
CDC23-207ENST00000483961 LRRC9Q6ZRR7 1453 aa23.24■■□□□ 1.31
CDC23-207ENST00000483961 MAP3K4Q9Y6R4 1608 aa23.24■■□□□ 1.31
CDC23-207ENST00000483961 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
CDC23-207ENST00000483961 CD109Q6YHK3 1445 aa23.23■■□□□ 1.31
CDC23-207ENST00000483961 TEX14Q8IWB6 1497 aa23.22■■□□□ 1.31
CDC23-207ENST00000483961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.21■■□□□ 1.31
CDC23-207ENST00000483961 SUPT6HQ7KZ85 1726 aaKnown RBP23.17■■□□□ 1.3
CDC23-207ENST00000483961 ARAP3Q8WWN8 1544 aa23.17■■□□□ 1.3
CDC23-207ENST00000483961 TTC37Q6PGP7 1564 aa23.16■■□□□ 1.3
CDC23-207ENST00000483961 PHLDB1Q86UU1 1377 aa23.15■■□□□ 1.3
CDC23-207ENST00000483961 PLCH2O75038 1416 aa23.14■■□□□ 1.29
CDC23-207ENST00000483961 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.29
CDC23-207ENST00000483961 NCOA2Q15596 1464 aa23.11■■□□□ 1.29
CDC23-207ENST00000483961 MYO5CQ9NQX4 1742 aa23.11■■□□□ 1.29
CDC23-207ENST00000483961 CFAP74Q9C0B2 1584 aa23.11■■□□□ 1.29
CDC23-207ENST00000483961 KANK4Q5T7N3 995 aaPredicted RBP23.11■■□□□ 1.29
CDC23-207ENST00000483961 NEO1Q92859 1461 aa23.11■■□□□ 1.29
CDC23-207ENST00000483961 EFCAB2Q5VUJ9 269 aa23.08■■□□□ 1.29
CDC23-207ENST00000483961 PREX2Q70Z35 1606 aa23.07■■□□□ 1.28
CDC23-207ENST00000483961 TSPOAP1O95153 1857 aa23.07■■□□□ 1.28
CDC23-207ENST00000483961 PPRC1Q5VV67 1664 aaKnown RBP23.06■■□□□ 1.28
CDC23-207ENST00000483961 ITSN2Q9NZM3 1697 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms