RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 MAP3K1Q13233 1512 aa16.47■□□□□ 0.23
SEC61A1-205ENST00000483956 SALL2Q9Y467 1007 aaPredicted RBP16.45■□□□□ 0.22
SEC61A1-205ENST00000483956 ITGAEP38570 1179 aa16.45■□□□□ 0.22
SEC61A1-205ENST00000483956 CFTRP13569 1480 aa16.45■□□□□ 0.22
SEC61A1-205ENST00000483956 PRDM2Q13029 1718 aa16.43■□□□□ 0.22
SEC61A1-205ENST00000483956 MAPKBP1O60336 1514 aa16.41■□□□□ 0.22
SEC61A1-205ENST00000483956 TIAM1Q13009 1591 aa16.41■□□□□ 0.22
SEC61A1-205ENST00000483956 KCNH8Q96L42 1107 aa16.4■□□□□ 0.22
SEC61A1-205ENST00000483956 DNAJC5Q9H3Z4 198 aa16.4■□□□□ 0.22
SEC61A1-205ENST00000483956 CCDC136Q96JN2 1154 aa16.39■□□□□ 0.21
SEC61A1-205ENST00000483956 MYT1LQ9UL68 1186 aa16.38■□□□□ 0.21
SEC61A1-205ENST00000483956 FANCIQ9NVI1 1328 aa16.37■□□□□ 0.21
SEC61A1-205ENST00000483956 RAB3GAP2Q9H2M9 1393 aa16.37■□□□□ 0.21
SEC61A1-205ENST00000483956 SETD5Q9C0A6 1442 aa16.32■□□□□ 0.2
SEC61A1-205ENST00000483956 NEFLP07196 543 aa16.32■□□□□ 0.2
SEC61A1-205ENST00000483956 LRRC9Q6ZRR7 1453 aa16.32■□□□□ 0.2
SEC61A1-205ENST00000483956 CFAP43Q8NDM7 1665 aa16.31■□□□□ 0.2
SEC61A1-205ENST00000483956 IGF1RP08069 1367 aa16.31■□□□□ 0.2
SEC61A1-205ENST00000483956 UBE2Q2Q8WVN8 375 aa16.29■□□□□ 0.2
SEC61A1-205ENST00000483956 FHAD1B1AJZ9 1412 aa16.26■□□□□ 0.19
SEC61A1-205ENST00000483956 ERICH6BQ5W0A0 696 aa16.26■□□□□ 0.19
SEC61A1-205ENST00000483956 WDR97A6NE52 1622 aa16.25■□□□□ 0.19
SEC61A1-205ENST00000483956 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
SEC61A1-205ENST00000483956 PHLDB1Q86UU1 1377 aa16.24■□□□□ 0.19
SEC61A1-205ENST00000483956 CARMIL1Q5VZK9 1371 aa16.24■□□□□ 0.19
SEC61A1-205ENST00000483956 PCF11O94913 1555 aaKnown RBP16.22■□□□□ 0.19
SEC61A1-205ENST00000483956 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.21■□□□□ 0.18
SEC61A1-205ENST00000483956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.2■□□□□ 0.18
SEC61A1-205ENST00000483956 FGD5Q6ZNL6 1462 aa16.2■□□□□ 0.18
SEC61A1-205ENST00000483956 NBR1Q14596 966 aa16.18■□□□□ 0.18
SEC61A1-205ENST00000483956 FYCO1Q9BQS8 1478 aa16.17■□□□□ 0.18
SEC61A1-205ENST00000483956 CADPSQ9ULU8 1353 aa16.16■□□□□ 0.18
SEC61A1-205ENST00000483956 EFCAB5A4FU69 1503 aa16.16■□□□□ 0.18
SEC61A1-205ENST00000483956 CDK11AQ9UQ88 783 aaPredicted RBP16.16■□□□□ 0.18
SEC61A1-205ENST00000483956 PPP1R15AO75807 674 aaPredicted RBP16.16■□□□□ 0.18
SEC61A1-205ENST00000483956 IL27Q8NEV9 243 aa16.16■□□□□ 0.18
SEC61A1-205ENST00000483956 AQRO60306 1485 aaKnown RBP eCLIP16.15■□□□□ 0.182e-8■■■■■ 33.4
SEC61A1-205ENST00000483956 RTN4Q9NQC3 1192 aaKnown RBP16.15■□□□□ 0.18
SEC61A1-205ENST00000483956 CCER2I3L3R5 266 aa16.12■□□□□ 0.17
SEC61A1-205ENST00000483956 CASKIN1Q8WXD9 1431 aa16.12■□□□□ 0.17
SEC61A1-205ENST00000483956 SIN3AQ96ST3 1273 aa16.12■□□□□ 0.17
SEC61A1-205ENST00000483956 DDX10Q13206 875 aaKnown RBP16.11■□□□□ 0.17
SEC61A1-205ENST00000483956 FAM50AQ14320 339 aaKnown RBP16.11■□□□□ 0.17
SEC61A1-205ENST00000483956 TRIM52Q96A61 297 aa16.1■□□□□ 0.17
SEC61A1-205ENST00000483956 CC2D2AQ9P2K1 1620 aa16.09■□□□□ 0.17
SEC61A1-205ENST00000483956 CUL7Q14999 1698 aa16.07■□□□□ 0.16
SEC61A1-205ENST00000483956 CTTNBP2Q8WZ74 1663 aa16.07■□□□□ 0.16
SEC61A1-205ENST00000483956 ABCA10Q8WWZ4 1543 aa16.06■□□□□ 0.16
SEC61A1-205ENST00000483956 FHOD3Q2V2M9 1422 aa16.06■□□□□ 0.16
SEC61A1-205ENST00000483956 DNMBPQ6XZF7 1577 aa16.05■□□□□ 0.16
SEC61A1-205ENST00000483956 FGD6Q6ZV73 1430 aa16.04■□□□□ 0.16
SEC61A1-205ENST00000483956 NOP58Q9Y2X3 529 aaKnown RBP16.04■□□□□ 0.16
SEC61A1-205ENST00000483956 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
SEC61A1-205ENST00000483956 IRX6P78412 446 aaPredicted RBP16.03■□□□□ 0.16
SEC61A1-205ENST00000483956 HFM1A2PYH4 1435 aa16.02■□□□□ 0.16
SEC61A1-205ENST00000483956 ANP32CO43423 234 aa16.02■□□□□ 0.15
SEC61A1-205ENST00000483956 FMN1Q68DA7 1419 aa16.02■□□□□ 0.15
SEC61A1-205ENST00000483956 CCDC18Q5T9S5 1454 aa16.02■□□□□ 0.15
SEC61A1-205ENST00000483956 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
SEC61A1-205ENST00000483956 FANCD2Q9BXW9 1451 aa16.01■□□□□ 0.15
SEC61A1-205ENST00000483956 UACAQ9BZF9 1416 aa16.01■□□□□ 0.15
SEC61A1-205ENST00000483956 PTPN23Q9H3S7 1636 aa16■□□□□ 0.15
SEC61A1-205ENST00000483956 TONSLQ96HA7 1378 aa15.99■□□□□ 0.15
SEC61A1-205ENST00000483956 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
SEC61A1-205ENST00000483956 P3H3Q8IVL6 736 aa15.97■□□□□ 0.15
SEC61A1-205ENST00000483956 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
SEC61A1-205ENST00000483956 SAMD9Q5K651 1589 aa15.96■□□□□ 0.15
SEC61A1-205ENST00000483956 TOPBP1Q92547 1522 aa15.96■□□□□ 0.14
SEC61A1-205ENST00000483956 RAD54L2Q9Y4B4 1467 aa15.95■□□□□ 0.14
SEC61A1-205ENST00000483956 KDM5BQ9UGL1 1544 aa15.95■□□□□ 0.14
SEC61A1-205ENST00000483956 RTL5Q5HYW3 569 aaPredicted RBP15.94■□□□□ 0.14
SEC61A1-205ENST00000483956 PTPRKQ15262 1439 aa15.94■□□□□ 0.14
SEC61A1-205ENST00000483956 LRRIQ1Q96JM4 1722 aa15.94■□□□□ 0.14
SEC61A1-205ENST00000483956 ATP1B4Q9UN42 357 aaPredicted RBP15.93■□□□□ 0.14
SEC61A1-205ENST00000483956 NAIPQ13075 1403 aa15.93■□□□□ 0.14
SEC61A1-205ENST00000483956 HIRIP3Q9BW71 556 aaPredicted RBP15.92■□□□□ 0.14
SEC61A1-205ENST00000483956 MYOM3Q5VTT5 1437 aa15.91■□□□□ 0.14
SEC61A1-205ENST00000483956 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
SEC61A1-205ENST00000483956 SUPT6HQ7KZ85 1726 aaKnown RBP15.91■□□□□ 0.14
SEC61A1-205ENST00000483956 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
SEC61A1-205ENST00000483956 PKNOX2Q96KN3 472 aa15.9■□□□□ 0.14
SEC61A1-205ENST00000483956 EHBP1L1Q8N3D4 1523 aa15.9■□□□□ 0.14
SEC61A1-205ENST00000483956 NCOA2Q15596 1464 aa15.9■□□□□ 0.14
SEC61A1-205ENST00000483956 EIF5BO60841 1220 aaKnown RBP15.89■□□□□ 0.13
SEC61A1-205ENST00000483956 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
SEC61A1-205ENST00000483956 ARHGEF11O15085 1522 aa15.88■□□□□ 0.13
SEC61A1-205ENST00000483956 GCC2Q8IWJ2 1684 aa15.87■□□□□ 0.13
SEC61A1-205ENST00000483956 HECW1Q76N89 1606 aa15.87■□□□□ 0.13
SEC61A1-205ENST00000483956 UGGT2Q9NYU1 1516 aa15.86■□□□□ 0.13
SEC61A1-205ENST00000483956 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
SEC61A1-205ENST00000483956 AKNAQ7Z591 1439 aa15.84■□□□□ 0.13
SEC61A1-205ENST00000483956 TCOF1Q13428 1488 aaKnown RBP15.83■□□□□ 0.13
SEC61A1-205ENST00000483956 PPP4R2Q9NY27 417 aa15.82■□□□□ 0.12
SEC61A1-205ENST00000483956 B4GALNT3Q6L9W6 998 aa15.8■□□□□ 0.12
SEC61A1-205ENST00000483956 DENND4BO75064 1496 aaPredicted RBP15.79■□□□□ 0.12
SEC61A1-205ENST00000483956 URB2Q14146 1524 aaKnown RBP15.77■□□□□ 0.12
SEC61A1-205ENST00000483956 MAGI3Q5TCQ9 1506 aa15.77■□□□□ 0.12
SEC61A1-205ENST00000483956 WASHC2AQ641Q2 1341 aa15.77■□□□□ 0.11
SEC61A1-205ENST00000483956 IPO9Q96P70 1041 aaKnown RBP15.77■□□□□ 0.11
SEC61A1-205ENST00000483956 LAMC3Q9Y6N6 1575 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms