RNA–Protein interactions for RNA: ENST00000483813.5

NECAB3-209, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 1,277 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-209	ENST00000483813	CYB5RL	Q6IPT4	315 aa		33.74	■■■□□ 2.99
NECAB3-209	ENST00000483813	EEA1	Q15075	1411 aa		33.72	■■■□□ 2.99
NECAB3-209	ENST00000483813	JPH4	Q96JJ6	628 aa		33.71	■■■□□ 2.99
NECAB3-209	ENST00000483813	KIAA0586	Q9BVV6	1533 aa		33.68	■■■□□ 2.98
NECAB3-209	ENST00000483813	ARAP1	Q96P48	1450 aa		33.63	■■■□□ 2.97
NECAB3-209	ENST00000483813	PRX	Q9BXM0	1461 aa		33.62	■■■□□ 2.97
NECAB3-209	ENST00000483813	PRG4	Q92954	1404 aa	Predicted RBP	33.62	■■■□□ 2.97
NECAB3-209	ENST00000483813	SHROOM2	Q13796	1616 aa		33.6	■■■□□ 2.97
NECAB3-209	ENST00000483813	ERCC6L2	Q5T890	1561 aa		33.55	■■■□□ 2.96
NECAB3-209	ENST00000483813	IQGAP2	Q13576	1575 aa		33.5	■■■□□ 2.95
NECAB3-209	ENST00000483813	EHMT2	Q96KQ7	1210 aa		33.42	■■■□□ 2.94
NECAB3-209	ENST00000483813	CARMIL2	Q6F5E8	1435 aa		33.4	■■■□□ 2.94
NECAB3-209	ENST00000483813	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.39	■■■□□ 2.94
NECAB3-209	ENST00000483813	CTTNBP2	Q8WZ74	1663 aa		33.36	■■■□□ 2.93
NECAB3-209	ENST00000483813	KIF21B	O75037	1637 aa		33.31	■■■□□ 2.92
NECAB3-209	ENST00000483813	UGGT2	Q9NYU1	1516 aa		33.28	■■■□□ 2.92
NECAB3-209	ENST00000483813	UBTF	P17480	764 aa	Known RBP	33.27	■■■□□ 2.92
NECAB3-209	ENST00000483813	TNIK	Q9UKE5	1360 aa		33.25	■■■□□ 2.91
NECAB3-209	ENST00000483813	RANGAP1	P46060	587 aa	Predicted RBP	33.25	■■■□□ 2.91
NECAB3-209	ENST00000483813	PTPRG	P23470	1445 aa		33.25	■■■□□ 2.91
NECAB3-209	ENST00000483813	DISP1	Q96F81	1524 aa		33.23	■■■□□ 2.91
NECAB3-209	ENST00000483813	GOLGA3	Q08378	1498 aa		33.2	■■■□□ 2.91
NECAB3-209	ENST00000483813	KIAA0556	O60303	1618 aa		33.15	■■■□□ 2.9
NECAB3-209	ENST00000483813	NPM1	P06748	294 aa	Known RBP eCLIP	33.13	■■■□□ 2.89
NECAB3-209	ENST00000483813	P3H3	Q8IVL6	736 aa		33.13	■■■□□ 2.89
NECAB3-209	ENST00000483813	TRH	P20396	242 aa	Predicted RBP	33.11	■■■□□ 2.89
NECAB3-209	ENST00000483813	ADCY10	Q96PN6	1610 aa		32.99	■■■□□ 2.87
NECAB3-209	ENST00000483813	UACA	Q9BZF9	1416 aa		32.99	■■■□□ 2.87
NECAB3-209	ENST00000483813	SAMD9	Q5K651	1589 aa		32.93	■■■□□ 2.86
NECAB3-209	ENST00000483813	UHRF1BP1L	A0JNW5	1464 aa		32.88	■■■□□ 2.85
NECAB3-209	ENST00000483813	ABCC2	Q92887	1545 aa		32.87	■■■□□ 2.85
NECAB3-209	ENST00000483813	PLB1	Q6P1J6	1458 aa		32.87	■■■□□ 2.85
NECAB3-209	ENST00000483813	EFCAB5	A4FU69	1503 aa		32.87	■■■□□ 2.85
NECAB3-209	ENST00000483813	FHOD3	Q2V2M9	1422 aa		32.86	■■■□□ 2.85
NECAB3-209	ENST00000483813	ABCA8	O94911	1581 aa		32.76	■■■□□ 2.84
NECAB3-209	ENST00000483813	ARID3C	A6NKF2	412 aa		32.76	■■■□□ 2.83
NECAB3-209	ENST00000483813	MAPKBP1	O60336	1514 aa		32.76	■■■□□ 2.83
NECAB3-209	ENST00000483813	KDM5B	Q9UGL1	1544 aa		32.72	■■■□□ 2.83
NECAB3-209	ENST00000483813	ARHGAP35	Q9NRY4	1499 aa		32.72	■■■□□ 2.83
NECAB3-209	ENST00000483813	LOC105371045	A0A1W2PR82	267 aa		32.7	■■■□□ 2.83
NECAB3-209	ENST00000483813	FAM69C	Q0P6D2	419 aa		32.7	■■■□□ 2.83
NECAB3-209	ENST00000483813	ASXL2	Q76L83	1435 aa		32.68	■■■□□ 2.82
NECAB3-209	ENST00000483813	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.68	■■■□□ 2.82
NECAB3-209	ENST00000483813	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.68	■■■□□ 2.82
NECAB3-209	ENST00000483813	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.67	■■■□□ 2.82
NECAB3-209	ENST00000483813	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.66	■■■□□ 2.82
NECAB3-209	ENST00000483813	RAPGEF6	Q8TEU7	1601 aa		32.66	■■■□□ 2.82
NECAB3-209	ENST00000483813	CLIP1	P30622	1438 aa		32.64	■■■□□ 2.82
NECAB3-209	ENST00000483813	ABCC10	Q5T3U5	1492 aa		32.63	■■■□□ 2.81
NECAB3-209	ENST00000483813	FMN1	Q68DA7	1419 aa		32.62	■■■□□ 2.81
NECAB3-209	ENST00000483813	ATP10B	O94823	1461 aa		32.55	■■■□□ 2.8
NECAB3-209	ENST00000483813	DIP2B	Q9P265	1576 aa		32.54	■■■□□ 2.8
NECAB3-209	ENST00000483813	KCNH8	Q96L42	1107 aa		32.54	■■■□□ 2.8
NECAB3-209	ENST00000483813	NUP153	P49790	1475 aa	Known RBP	32.54	■■■□□ 2.8
NECAB3-209	ENST00000483813	WDR7	Q9Y4E6	1490 aa		32.52	■■■□□ 2.8
NECAB3-209	ENST00000483813	KIF13A	Q9H1H9	1805 aa		32.51	■■■□□ 2.8
NECAB3-209	ENST00000483813	CEP162	Q5TB80	1403 aa		32.5	■■■□□ 2.79
NECAB3-209	ENST00000483813	EPRS	P07814	1512 aa	Known RBP	32.46	■■■□□ 2.79
NECAB3-209	ENST00000483813	PLEKHD1	A6NEE1	506 aa		32.42	■■■□□ 2.78
NECAB3-209	ENST00000483813	HECW1	Q76N89	1606 aa		32.41	■■■□□ 2.78
NECAB3-209	ENST00000483813	GLI2	P10070	1586 aa		32.38	■■■□□ 2.77
NECAB3-209	ENST00000483813	CDK13	Q14004	1512 aa	Known RBP	32.35	■■■□□ 2.77
NECAB3-209	ENST00000483813	CASKIN1	Q8WXD9	1431 aa		32.34	■■■□□ 2.77
NECAB3-209	ENST00000483813	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.33	■■■□□ 2.77
NECAB3-209	ENST00000483813	TSPOAP1	O95153	1857 aa		32.32	■■■□□ 2.76
NECAB3-209	ENST00000483813	PCF11	O94913	1555 aa	Known RBP	32.31	■■■□□ 2.76
NECAB3-209	ENST00000483813	FYCO1	Q9BQS8	1478 aa		32.26	■■■□□ 2.75
NECAB3-209	ENST00000483813	CD109	Q6YHK3	1445 aa		32.26	■■■□□ 2.75
NECAB3-209	ENST00000483813	MAP3K4	Q9Y6R4	1608 aa		32.23	■■■□□ 2.75
NECAB3-209	ENST00000483813	CCDC18	Q5T9S5	1454 aa		32.22	■■■□□ 2.75
NECAB3-209	ENST00000483813	TEX14	Q8IWB6	1497 aa		32.18	■■■□□ 2.74
NECAB3-209	ENST00000483813	CFAP43	Q8NDM7	1665 aa		32.17	■■■□□ 2.74
NECAB3-209	ENST00000483813	LRRIQ1	Q96JM4	1722 aa		32.12	■■■□□ 2.73
NECAB3-209	ENST00000483813	ABCA9	Q8IUA7	1624 aa		32.11	■■■□□ 2.73
NECAB3-209	ENST00000483813	PPRC1	Q5VV67	1664 aa	Known RBP	32.11	■■■□□ 2.73
NECAB3-209	ENST00000483813	MAGI3	Q5TCQ9	1506 aa		32.1	■■■□□ 2.73
NECAB3-209	ENST00000483813	TRO	Q12816	1431 aa	Predicted RBP	32.09	■■■□□ 2.73
NECAB3-209	ENST00000483813	VPS8	Q8N3P4	1428 aa		32.08	■■■□□ 2.73
NECAB3-209	ENST00000483813	KDM6B	O15054	1643 aa		32.07	■■■□□ 2.72
NECAB3-209	ENST00000483813	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.04	■■■□□ 2.72
NECAB3-209	ENST00000483813	KIF14	Q15058	1648 aa		32.01	■■■□□ 2.72
NECAB3-209	ENST00000483813	TTC37	Q6PGP7	1564 aa		31.99	■■■□□ 2.71
NECAB3-209	ENST00000483813	MTUS2	Q5JR59	1369 aa		31.99	■■■□□ 2.71
NECAB3-209	ENST00000483813	APLP2	Q06481	763 aa		31.92	■■■□□ 2.7
NECAB3-209	ENST00000483813	PHLDB1	Q86UU1	1377 aa		31.91	■■■□□ 2.7
NECAB3-209	ENST00000483813	FANCA	O15360	1455 aa		31.9	■■■□□ 2.7
NECAB3-209	ENST00000483813	NEO1	Q92859	1461 aa		31.9	■■■□□ 2.7
NECAB3-209	ENST00000483813	PLCH2	O75038	1416 aa		31.89	■■■□□ 2.7
NECAB3-209	ENST00000483813	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.89	■■■□□ 2.7
NECAB3-209	ENST00000483813	EFCAB2	Q5VUJ9	269 aa		31.87	■■■□□ 2.69
NECAB3-209	ENST00000483813	AKNA	Q7Z591	1439 aa		31.83	■■■□□ 2.69
NECAB3-209	ENST00000483813	MYO5C	Q9NQX4	1742 aa		31.83	■■■□□ 2.69
NECAB3-209	ENST00000483813	TIAM1	Q13009	1591 aa		31.82	■■■□□ 2.68
NECAB3-209	ENST00000483813	CFAP74	Q9C0B2	1584 aa		31.82	■■■□□ 2.68
NECAB3-209	ENST00000483813	ARHGAP5	Q13017	1502 aa		31.82	■■■□□ 2.68
NECAB3-209	ENST00000483813	EHBP1L1	Q8N3D4	1523 aa		31.81	■■■□□ 2.68
NECAB3-209	ENST00000483813	ARAP3	Q8WWN8	1544 aa		31.81	■■■□□ 2.68
NECAB3-209	ENST00000483813	RAPGEF3	O95398	923 aa		31.79	■■■□□ 2.68
NECAB3-209	ENST00000483813	CCNB3	Q8WWL7	1395 aa		31.78	■■■□□ 2.68
NECAB3-209	ENST00000483813	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.74	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms