RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 CTTNBP2Q8WZ74 1663 aa16.05■□□□□ 0.16
HDAC6-226ENST00000483656 ARHGAP35Q9NRY4 1499 aa16.04■□□□□ 0.16
HDAC6-226ENST00000483656 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
HDAC6-226ENST00000483656 CHMP7Q8WUX9 453 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-226ENST00000483656 FBLN2P98095 1184 aa15.98■□□□□ 0.15
HDAC6-226ENST00000483656 NUP160Q12769 1436 aa15.98■□□□□ 0.15
HDAC6-226ENST00000483656 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
HDAC6-226ENST00000483656 VPS8Q8N3P4 1428 aa15.97■□□□□ 0.15
HDAC6-226ENST00000483656 KIAA0586Q9BVV6 1533 aa15.97■□□□□ 0.15
HDAC6-226ENST00000483656 IQGAP2Q13576 1575 aa15.96■□□□□ 0.14
HDAC6-226ENST00000483656 EFCAB5A4FU69 1503 aa15.94■□□□□ 0.14
HDAC6-226ENST00000483656 SAMD9Q5K651 1589 aa15.93■□□□□ 0.14
HDAC6-226ENST00000483656 CHD1O14646 1710 aa15.92■□□□□ 0.14
HDAC6-226ENST00000483656 P3H3Q8IVL6 736 aa15.92■□□□□ 0.14
HDAC6-226ENST00000483656 UGGT2Q9NYU1 1516 aa15.91■□□□□ 0.14
HDAC6-226ENST00000483656 FHOD3Q2V2M9 1422 aa15.9■□□□□ 0.14
HDAC6-226ENST00000483656 DISP1Q96F81 1524 aa15.85■□□□□ 0.13
HDAC6-226ENST00000483656 PPARGC1BQ86YN6 1023 aaKnown RBP15.84■□□□□ 0.13
HDAC6-226ENST00000483656 JPH4Q96JJ6 628 aa15.84■□□□□ 0.13
HDAC6-226ENST00000483656 KIAA0556O60303 1618 aa15.81■□□□□ 0.12
HDAC6-226ENST00000483656 FMN1Q68DA7 1419 aa15.79■□□□□ 0.12
HDAC6-226ENST00000483656 PCF11O94913 1555 aaKnown RBP15.79■□□□□ 0.12
HDAC6-226ENST00000483656 CLASP1Q7Z460 1538 aa15.78■□□□□ 0.12
HDAC6-226ENST00000483656 CASKIN1Q8WXD9 1431 aa15.78■□□□□ 0.12
HDAC6-226ENST00000483656 SHROOM2Q13796 1616 aa15.76■□□□□ 0.11
HDAC6-226ENST00000483656 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
HDAC6-226ENST00000483656 AEBP2Q6ZN18 517 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-226ENST00000483656 PRG4Q92954 1404 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-226ENST00000483656 APLP2Q06481 763 aa15.73■□□□□ 0.11
HDAC6-226ENST00000483656 CARMIL2Q6F5E8 1435 aa15.73■□□□□ 0.11
HDAC6-226ENST00000483656 MAP3K1Q13233 1512 aa15.73■□□□□ 0.11
HDAC6-226ENST00000483656 KANK4Q5T7N3 995 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-226ENST00000483656 TRIM26Q12899 539 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-226ENST00000483656 TTBK1Q5TCY1 1321 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-226ENST00000483656 TIAM1Q13009 1591 aa15.7■□□□□ 0.1
HDAC6-226ENST00000483656 ERCC6L2Q5T890 1561 aa15.69■□□□□ 0.1
HDAC6-226ENST00000483656 ATP1B4Q9UN42 357 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-226ENST00000483656 LRRIQ1Q96JM4 1722 aa15.67■□□□□ 0.1
HDAC6-226ENST00000483656 CFAP43Q8NDM7 1665 aa15.67■□□□□ 0.1
HDAC6-226ENST00000483656 OSCARQ8IYS5 282 aa15.66■□□□□ 0.1
HDAC6-226ENST00000483656 PCGF6Q9BYE7 350 aa15.66■□□□□ 0.1
HDAC6-226ENST00000483656 HECW1Q76N89 1606 aa15.64■□□□□ 0.09
HDAC6-226ENST00000483656 LRRC9Q6ZRR7 1453 aa15.64■□□□□ 0.09
HDAC6-226ENST00000483656 RAPGEF6Q8TEU7 1601 aa15.63■□□□□ 0.09
HDAC6-226ENST00000483656 PLB1Q6P1J6 1458 aa15.63■□□□□ 0.09
HDAC6-226ENST00000483656 PTPRGP23470 1445 aa15.62■□□□□ 0.09
HDAC6-226ENST00000483656 NUP153P49790 1475 aaKnown RBP15.62■□□□□ 0.09
HDAC6-226ENST00000483656 ABCA8O94911 1581 aa15.62■□□□□ 0.09
HDAC6-226ENST00000483656 EPRSP07814 1512 aaKnown RBP15.61■□□□□ 0.09
HDAC6-226ENST00000483656 CCDC18Q5T9S5 1454 aa15.59■□□□□ 0.09
HDAC6-226ENST00000483656 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.09
HDAC6-226ENST00000483656 MAGI3Q5TCQ9 1506 aa15.57■□□□□ 0.08
HDAC6-226ENST00000483656 ARID3CA6NKF2 412 aa15.56■□□□□ 0.08
HDAC6-226ENST00000483656 UACAQ9BZF9 1416 aa15.53■□□□□ 0.08
HDAC6-226ENST00000483656 MTUS2Q5JR59 1369 aa15.52■□□□□ 0.08
HDAC6-226ENST00000483656 ATP10BO94823 1461 aa15.52■□□□□ 0.07
HDAC6-226ENST00000483656 EHBP1L1Q8N3D4 1523 aa15.51■□□□□ 0.07
HDAC6-226ENST00000483656 PHLDB1Q86UU1 1377 aa15.5■□□□□ 0.07
HDAC6-226ENST00000483656 RRBP1Q9P2E9 1410 aaKnown RBP15.49■□□□□ 0.07
HDAC6-226ENST00000483656 ABCC2Q92887 1545 aa15.48■□□□□ 0.07
HDAC6-226ENST00000483656 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
HDAC6-226ENST00000483656 UHRF1BP1LA0JNW5 1464 aa15.47■□□□□ 0.07
HDAC6-226ENST00000483656 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
HDAC6-226ENST00000483656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-226ENST00000483656 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
HDAC6-226ENST00000483656 TROQ12816 1431 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-226ENST00000483656 SUPT6HQ7KZ85 1726 aaKnown RBP15.44■□□□□ 0.06
HDAC6-226ENST00000483656 CDK11AQ9UQ88 783 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-226ENST00000483656 CCNB3Q8WWL7 1395 aa15.42■□□□□ 0.06
HDAC6-226ENST00000483656 ADCY10Q96PN6 1610 aa15.41■□□□□ 0.06
HDAC6-226ENST00000483656 KDM5BQ9UGL1 1544 aa15.41■□□□□ 0.06
HDAC6-226ENST00000483656 PLEKHD1A6NEE1 506 aa15.4■□□□□ 0.06
HDAC6-226ENST00000483656 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-226ENST00000483656 MYOM3Q5VTT5 1437 aa15.39■□□□□ 0.05
HDAC6-226ENST00000483656 FGD6Q6ZV73 1430 aa15.38■□□□□ 0.05
HDAC6-226ENST00000483656 ZCCHC11Q5TAX3 1644 aaKnown RBP15.38■□□□□ 0.05
HDAC6-226ENST00000483656 KIF14Q15058 1648 aa15.37■□□□□ 0.05
HDAC6-226ENST00000483656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.35■□□□□ 0.05
HDAC6-226ENST00000483656 ABCC10Q5T3U5 1492 aa15.34■□□□□ 0.05
HDAC6-226ENST00000483656 RIMBP3CA6NJZ7 1639 aa15.34■□□□□ 0.05
HDAC6-226ENST00000483656 RIMBP3BA6NNM3 1639 aa15.34■□□□□ 0.05
HDAC6-226ENST00000483656 RIMBP3Q9UFD9 1639 aa15.34■□□□□ 0.05
HDAC6-226ENST00000483656 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
HDAC6-226ENST00000483656 MIA2Q96PC5 1412 aa15.32■□□□□ 0.04
HDAC6-226ENST00000483656 TCOF1Q13428 1488 aaKnown RBP15.32■□□□□ 0.04
HDAC6-226ENST00000483656 GPATCH8Q9UKJ3 1502 aaKnown RBP15.32■□□□□ 0.04
HDAC6-226ENST00000483656 PTPN23Q9H3S7 1636 aa15.3■□□□□ 0.04
HDAC6-226ENST00000483656 ITGAEP38570 1179 aa15.27■□□□□ 0.04
HDAC6-226ENST00000483656 CYB5RLQ6IPT4 315 aa15.26■□□□□ 0.03
HDAC6-226ENST00000483656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.26■□□□□ 0.03
HDAC6-226ENST00000483656 CDC42BPAQ5VT25 1732 aa15.26■□□□□ 0.03
HDAC6-226ENST00000483656 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
HDAC6-226ENST00000483656 ZNF644Q9H582 1327 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-226ENST00000483656 KCNH8Q96L42 1107 aa15.25■□□□□ 0.03
HDAC6-226ENST00000483656 WDR7Q9Y4E6 1490 aa15.25■□□□□ 0.03
HDAC6-226ENST00000483656 ASXL2Q76L83 1435 aa15.25■□□□□ 0.03
HDAC6-226ENST00000483656 TTC37Q6PGP7 1564 aa15.24■□□□□ 0.03
HDAC6-226ENST00000483656 ITSN2Q9NZM3 1697 aa15.24■□□□□ 0.03
HDAC6-226ENST00000483656 CFDP1Q9UEE9 299 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-226ENST00000483656 NPM1P06748 294 aaKnown RBP eCLIP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms