RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 SHROOM2Q13796 1616 aa26.17■■□□□ 1.78
RPP40-206ENST00000483546 KIAA0586Q9BVV6 1533 aa26.13■■□□□ 1.77
RPP40-206ENST00000483546 PRXQ9BXM0 1461 aa26.1■■□□□ 1.77
RPP40-206ENST00000483546 CSRNP3Q8WYN3 585 aa26.06■■□□□ 1.76
RPP40-206ENST00000483546 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
RPP40-206ENST00000483546 JPH4Q96JJ6 628 aa26.02■■□□□ 1.76
RPP40-206ENST00000483546 IQGAP2Q13576 1575 aa25.99■■□□□ 1.75
RPP40-206ENST00000483546 PRG4Q92954 1404 aaPredicted RBP25.97■■□□□ 1.75
RPP40-206ENST00000483546 CTTNBP2Q8WZ74 1663 aa25.97■■□□□ 1.75
RPP40-206ENST00000483546 ERCC6L2Q5T890 1561 aa25.95■■□□□ 1.74
RPP40-206ENST00000483546 CYB5RLQ6IPT4 315 aa25.93■■□□□ 1.74
RPP40-206ENST00000483546 KIF21BO75037 1637 aa25.92■■□□□ 1.74
RPP40-206ENST00000483546 FAM9AQ8IZU1 332 aaPredicted RBP25.87■■□□□ 1.73
RPP40-206ENST00000483546 UGGT2Q9NYU1 1516 aa25.87■■□□□ 1.73
RPP40-206ENST00000483546 CARMIL2Q6F5E8 1435 aa25.86■■□□□ 1.73
RPP40-206ENST00000483546 GOLGA3Q08378 1498 aa25.76■■□□□ 1.71
RPP40-206ENST00000483546 DISP1Q96F81 1524 aa25.76■■□□□ 1.71
RPP40-206ENST00000483546 KIAA0556O60303 1618 aa25.74■■□□□ 1.71
RPP40-206ENST00000483546 TNIKQ9UKE5 1360 aa25.73■■□□□ 1.71
RPP40-206ENST00000483546 PTPRGP23470 1445 aa25.69■■□□□ 1.7
RPP40-206ENST00000483546 SAMD9Q5K651 1589 aa25.62■■□□□ 1.69
RPP40-206ENST00000483546 ADCY10Q96PN6 1610 aa25.59■■□□□ 1.69
RPP40-206ENST00000483546 UBTFP17480 764 aaKnown RBP25.58■■□□□ 1.69
RPP40-206ENST00000483546 UHRF1BP1LA0JNW5 1464 aa25.56■■□□□ 1.68
RPP40-206ENST00000483546 EFCAB5A4FU69 1503 aa25.56■■□□□ 1.68
RPP40-206ENST00000483546 UACAQ9BZF9 1416 aa25.54■■□□□ 1.68
RPP40-206ENST00000483546 ABCC2Q92887 1545 aa25.52■■□□□ 1.68
RPP40-206ENST00000483546 NPM1P06748 294 aaKnown RBP eCLIP25.51■■□□□ 1.67
RPP40-206ENST00000483546 TTBK1Q5TCY1 1321 aaPredicted RBP25.49■■□□□ 1.67
RPP40-206ENST00000483546 MAPKBP1O60336 1514 aa25.47■■□□□ 1.67
RPP40-206ENST00000483546 ABCA8O94911 1581 aa25.45■■□□□ 1.66
RPP40-206ENST00000483546 EHMT2Q96KQ7 1210 aa25.45■■□□□ 1.66
RPP40-206ENST00000483546 PLB1Q6P1J6 1458 aa25.41■■□□□ 1.66
RPP40-206ENST00000483546 KDM5BQ9UGL1 1544 aa25.41■■□□□ 1.66
RPP40-206ENST00000483546 P3H3Q8IVL6 736 aa25.4■■□□□ 1.66
RPP40-206ENST00000483546 TRHP20396 242 aaPredicted RBP25.38■■□□□ 1.65
RPP40-206ENST00000483546 RANGAP1P46060 587 aaPredicted RBP25.38■■□□□ 1.65
RPP40-206ENST00000483546 FHOD3Q2V2M9 1422 aa25.37■■□□□ 1.65
RPP40-206ENST00000483546 ARHGAP35Q9NRY4 1499 aa25.35■■□□□ 1.65
RPP40-206ENST00000483546 ZCCHC11Q5TAX3 1644 aaKnown RBP25.35■■□□□ 1.65
RPP40-206ENST00000483546 RAPGEF6Q8TEU7 1601 aa25.34■■□□□ 1.65
RPP40-206ENST00000483546 ABCC10Q5T3U5 1492 aa25.3■■□□□ 1.64
RPP40-206ENST00000483546 KIF13AQ9H1H9 1805 aa25.3■■□□□ 1.64
RPP40-206ENST00000483546 FMN1Q68DA7 1419 aa25.29■■□□□ 1.64
RPP40-206ENST00000483546 ASXL2Q76L83 1435 aa25.27■■□□□ 1.64
RPP40-206ENST00000483546 DIP2BQ9P265 1576 aa25.27■■□□□ 1.64
RPP40-206ENST00000483546 CLIP1P30622 1438 aa25.24■■□□□ 1.63
RPP40-206ENST00000483546 NUP153P49790 1475 aaKnown RBP25.21■■□□□ 1.63
RPP40-206ENST00000483546 ATP10BO94823 1461 aa25.21■■□□□ 1.63
RPP40-206ENST00000483546 WDR7Q9Y4E6 1490 aa25.2■■□□□ 1.62
RPP40-206ENST00000483546 GLI2P10070 1586 aa25.19■■□□□ 1.62
RPP40-206ENST00000483546 HECW1Q76N89 1606 aa25.17■■□□□ 1.62
RPP40-206ENST00000483546 FAM69CQ0P6D2 419 aa25.17■■□□□ 1.62
RPP40-206ENST00000483546 CEP162Q5TB80 1403 aa25.14■■□□□ 1.62
RPP40-206ENST00000483546 EPRSP07814 1512 aaKnown RBP25.14■■□□□ 1.62
RPP40-206ENST00000483546 LOC105371045A0A1W2PR82 267 aa25.1■■□□□ 1.61
RPP40-206ENST00000483546 CASKIN1Q8WXD9 1431 aa25.08■■□□□ 1.61
RPP40-206ENST00000483546 MAP3K4Q9Y6R4 1608 aa25.06■■□□□ 1.6
RPP40-206ENST00000483546 ARID3CA6NKF2 412 aa25.06■■□□□ 1.6
RPP40-206ENST00000483546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.06■■□□□ 1.6
RPP40-206ENST00000483546 HNRNPUL2Q1KMD3 747 aaKnown RBP25.06■■□□□ 1.6
RPP40-206ENST00000483546 PCF11O94913 1555 aaKnown RBP25.05■■□□□ 1.6
RPP40-206ENST00000483546 FYCO1Q9BQS8 1478 aa25.05■■□□□ 1.6
RPP40-206ENST00000483546 CFAP43Q8NDM7 1665 aa25.04■■□□□ 1.6
RPP40-206ENST00000483546 TSPOAP1O95153 1857 aa25.02■■□□□ 1.6
RPP40-206ENST00000483546 CCDC18Q5T9S5 1454 aa25.02■■□□□ 1.6
RPP40-206ENST00000483546 PLEKHD1A6NEE1 506 aa25.01■■□□□ 1.59
RPP40-206ENST00000483546 CDK13Q14004 1512 aaKnown RBP25.01■■□□□ 1.59
RPP40-206ENST00000483546 LRRIQ1Q96JM4 1722 aa24.99■■□□□ 1.59
RPP40-206ENST00000483546 ATP1B4Q9UN42 357 aaPredicted RBP24.99■■□□□ 1.59
RPP40-206ENST00000483546 CDK11AQ9UQ88 783 aaPredicted RBP24.98■■□□□ 1.59
RPP40-206ENST00000483546 ABCA9Q8IUA7 1624 aa24.97■■□□□ 1.59
RPP40-206ENST00000483546 KCNH8Q96L42 1107 aa24.97■■□□□ 1.59
RPP40-206ENST00000483546 PPRC1Q5VV67 1664 aaKnown RBP24.97■■□□□ 1.59
RPP40-206ENST00000483546 TEX14Q8IWB6 1497 aa24.96■■□□□ 1.59
RPP40-206ENST00000483546 CD109Q6YHK3 1445 aa24.93■■□□□ 1.58
RPP40-206ENST00000483546 MAGI3Q5TCQ9 1506 aa24.92■■□□□ 1.58
RPP40-206ENST00000483546 TROQ12816 1431 aaPredicted RBP24.87■■□□□ 1.57
RPP40-206ENST00000483546 VPS8Q8N3P4 1428 aa24.86■■□□□ 1.57
RPP40-206ENST00000483546 KDM6BO15054 1643 aa24.84■■□□□ 1.57
RPP40-206ENST00000483546 KIF14Q15058 1648 aa24.84■■□□□ 1.57
RPP40-206ENST00000483546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.84■■□□□ 1.57
RPP40-206ENST00000483546 TTC37Q6PGP7 1564 aa24.8■■□□□ 1.56
RPP40-206ENST00000483546 PHLDB1Q86UU1 1377 aa24.8■■□□□ 1.56
RPP40-206ENST00000483546 NEO1Q92859 1461 aa24.77■■□□□ 1.56
RPP40-206ENST00000483546 CFAP74Q9C0B2 1584 aa24.76■■□□□ 1.55
RPP40-206ENST00000483546 MYO5CQ9NQX4 1742 aa24.75■■□□□ 1.55
RPP40-206ENST00000483546 ARAP3Q8WWN8 1544 aa24.75■■□□□ 1.55
RPP40-206ENST00000483546 MAP3K1Q13233 1512 aa24.71■■□□□ 1.55
RPP40-206ENST00000483546 PLCH2O75038 1416 aa24.71■■□□□ 1.55
RPP40-206ENST00000483546 EHBP1L1Q8N3D4 1523 aa24.71■■□□□ 1.55
RPP40-206ENST00000483546 TIAM1Q13009 1591 aa24.7■■□□□ 1.54
RPP40-206ENST00000483546 MTUS2Q5JR59 1369 aa24.69■■□□□ 1.54
RPP40-206ENST00000483546 FANCAO15360 1455 aa24.68■■□□□ 1.54
RPP40-206ENST00000483546 COL17A1Q9UMD9 1497 aaPredicted RBP24.65■■□□□ 1.54
RPP40-206ENST00000483546 PREX2Q70Z35 1606 aa24.64■■□□□ 1.54
RPP40-206ENST00000483546 AKNAQ7Z591 1439 aa24.62■■□□□ 1.53
RPP40-206ENST00000483546 CDC42BPAQ5VT25 1732 aa24.61■■□□□ 1.53
RPP40-206ENST00000483546 CDC42BPBQ9Y5S2 1711 aa24.61■■□□□ 1.53
RPP40-206ENST00000483546 EFCAB2Q5VUJ9 269 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms