RNA–Protein interactions for RNA: ENST00000483282.1

C1orf43-208, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 3

Gene C1orf43, Length 456 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-208ENST00000483282 TSHZ2Q9NRE2 1034 aa11.64□□□□□ -0.55
C1orf43-208ENST00000483282 CDK11AQ9UQ88 783 aaPredicted RBP11.64□□□□□ -0.55
C1orf43-208ENST00000483282 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.55
C1orf43-208ENST00000483282 ARAP1Q96P48 1450 aa11.63□□□□□ -0.55
C1orf43-208ENST00000483282 ERICH6Q7L0X2 663 aa11.61□□□□□ -0.55
C1orf43-208ENST00000483282 EFCAB5A4FU69 1503 aa11.6□□□□□ -0.55
C1orf43-208ENST00000483282 ERCC6Q03468 1493 aa11.6□□□□□ -0.55
C1orf43-208ENST00000483282 CFTRP13569 1480 aa11.57□□□□□ -0.56
C1orf43-208ENST00000483282 RAB3GAP2Q9H2M9 1393 aa11.57□□□□□ -0.56
C1orf43-208ENST00000483282 TIAM1Q13009 1591 aa11.57□□□□□ -0.56
C1orf43-208ENST00000483282 LRRC9Q6ZRR7 1453 aa11.56□□□□□ -0.56
C1orf43-208ENST00000483282 FMN1Q68DA7 1419 aa11.55□□□□□ -0.56
C1orf43-208ENST00000483282 CCDC18Q5T9S5 1454 aa11.55□□□□□ -0.56
C1orf43-208ENST00000483282 FYCO1Q9BQS8 1478 aa11.55□□□□□ -0.56
C1orf43-208ENST00000483282 PPP1R15AO75807 674 aaPredicted RBP11.54□□□□□ -0.56
C1orf43-208ENST00000483282 TONSLQ96HA7 1378 aa11.54□□□□□ -0.56
C1orf43-208ENST00000483282 ARHGAP35Q9NRY4 1499 aa11.53□□□□□ -0.56
C1orf43-208ENST00000483282 CUX1P39880 1505 aa11.52□□□□□ -0.57
C1orf43-208ENST00000483282 FKBP8Q14318 412 aa11.52□□□□□ -0.57
C1orf43-208ENST00000483282 PLPPR3Q6T4P5 718 aa11.52□□□□□ -0.57
C1orf43-208ENST00000483282 NESP48681 1621 aa11.52□□□□□ -0.57
C1orf43-208ENST00000483282 RBM19Q9Y4C8 960 aaKnown RBP11.51□□□□□ -0.57
C1orf43-208ENST00000483282 PRDM2Q13029 1718 aa11.5□□□□□ -0.57
C1orf43-208ENST00000483282 UACAQ9BZF9 1416 aa11.5□□□□□ -0.57
C1orf43-208ENST00000483282 THOC2Q8NI27 1593 aaKnown RBP11.5□□□□□ -0.57
C1orf43-208ENST00000483282 PPP4R2Q9NY27 417 aa11.49□□□□□ -0.57
C1orf43-208ENST00000483282 ARID4BQ4LE39 1312 aaPredicted RBP11.49□□□□□ -0.57
C1orf43-208ENST00000483282 AKNAQ7Z591 1439 aa11.49□□□□□ -0.57
C1orf43-208ENST00000483282 CARMIL1Q5VZK9 1371 aa11.48□□□□□ -0.57
C1orf43-208ENST00000483282 CASKIN1Q8WXD9 1431 aa11.48□□□□□ -0.57
C1orf43-208ENST00000483282 MAPKBP1O60336 1514 aa11.47□□□□□ -0.57
C1orf43-208ENST00000483282 CFAP43Q8NDM7 1665 aa11.46□□□□□ -0.57
C1orf43-208ENST00000483282 HFM1A2PYH4 1435 aa11.46□□□□□ -0.57
C1orf43-208ENST00000483282 KANK4Q5T7N3 995 aaPredicted RBP11.46□□□□□ -0.57
C1orf43-208ENST00000483282 FGD5Q6ZNL6 1462 aa11.45□□□□□ -0.58
C1orf43-208ENST00000483282 IGF1RP08069 1367 aa11.45□□□□□ -0.58
C1orf43-208ENST00000483282 BCL11AQ9H165 835 aa11.44□□□□□ -0.58
C1orf43-208ENST00000483282 KTN1Q86UP2 1357 aaKnown RBP11.43□□□□□ -0.58
C1orf43-208ENST00000483282 DDX10Q13206 875 aaKnown RBP11.43□□□□□ -0.58
C1orf43-208ENST00000483282 USP35Q9P2H5 1018 aa11.42□□□□□ -0.58
C1orf43-208ENST00000483282 CUL7Q14999 1698 aa11.42□□□□□ -0.58
C1orf43-208ENST00000483282 EIF4G2P78344 907 aaKnown RBP eCLIP11.4□□□□□ -0.58
C1orf43-208ENST00000483282 CADPSQ9ULU8 1353 aa11.39□□□□□ -0.59
C1orf43-208ENST00000483282 ZBED9Q6R2W3 1325 aa11.38□□□□□ -0.59
C1orf43-208ENST00000483282 FGD6Q6ZV73 1430 aa11.37□□□□□ -0.59
C1orf43-208ENST00000483282 FAM50AQ14320 339 aaKnown RBP11.37□□□□□ -0.59
C1orf43-208ENST00000483282 ROCK2O75116 1388 aaKnown RBP11.37□□□□□ -0.59
C1orf43-208ENST00000483282 MIA2Q96PC5 1412 aa11.36□□□□□ -0.59
C1orf43-208ENST00000483282 ANP32AP39687 249 aaKnown RBP11.36□□□□□ -0.59
C1orf43-208ENST00000483282 KIF21AQ7Z4S6 1674 aa11.36□□□□□ -0.59
C1orf43-208ENST00000483282 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
C1orf43-208ENST00000483282 MTUS2Q5JR59 1369 aa11.35□□□□□ -0.59
C1orf43-208ENST00000483282 RTL5Q5HYW3 569 aaPredicted RBP11.34□□□□□ -0.59
C1orf43-208ENST00000483282 PHLDB1Q86UU1 1377 aa11.33□□□□□ -0.6
C1orf43-208ENST00000483282 EHBP1L1Q8N3D4 1523 aa11.33□□□□□ -0.6
C1orf43-208ENST00000483282 ABCA10Q8WWZ4 1543 aa11.33□□□□□ -0.6
C1orf43-208ENST00000483282 MYOM3Q5VTT5 1437 aa11.33□□□□□ -0.6
C1orf43-208ENST00000483282 NCOA2Q15596 1464 aa11.32□□□□□ -0.6
C1orf43-208ENST00000483282 HNRNPUQ00839 825 aaKnown RBP eCLIP11.31□□□□□ -0.6
C1orf43-208ENST00000483282 INSRP06213 1382 aa11.3□□□□□ -0.6
C1orf43-208ENST00000483282 ROCK1Q13464 1354 aa11.3□□□□□ -0.6
C1orf43-208ENST00000483282 CNTLNQ9NXG0 1405 aa11.3□□□□□ -0.6
C1orf43-208ENST00000483282 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
C1orf43-208ENST00000483282 ITGAEP38570 1179 aa11.28□□□□□ -0.6
C1orf43-208ENST00000483282 TCOF1Q13428 1488 aaKnown RBP11.27□□□□□ -0.6
C1orf43-208ENST00000483282 PDE3BQ13370 1112 aa11.27□□□□□ -0.61
C1orf43-208ENST00000483282 SENP3Q9H4L4 574 aaPredicted RBP11.27□□□□□ -0.61
C1orf43-208ENST00000483282 PTPN23Q9H3S7 1636 aa11.27□□□□□ -0.61
C1orf43-208ENST00000483282 DNMBPQ6XZF7 1577 aa11.26□□□□□ -0.61
C1orf43-208ENST00000483282 PPM1GO15355 546 aaPredicted RBP11.26□□□□□ -0.61
C1orf43-208ENST00000483282 RANGAP1P46060 587 aaPredicted RBP11.26□□□□□ -0.61
C1orf43-208ENST00000483282 NOP58Q9Y2X3 529 aaKnown RBP11.26□□□□□ -0.61
C1orf43-208ENST00000483282 NAIPQ13075 1403 aa11.26□□□□□ -0.61
C1orf43-208ENST00000483282 LAMC3Q9Y6N6 1575 aa11.25□□□□□ -0.61
C1orf43-208ENST00000483282 HECW1Q76N89 1606 aa11.25□□□□□ -0.61
C1orf43-208ENST00000483282 MS4A1P11836 297 aa11.25□□□□□ -0.61
C1orf43-208ENST00000483282 SMG6Q86US8 1419 aaKnown RBP11.25□□□□□ -0.61
C1orf43-208ENST00000483282 PCF11O94913 1555 aaKnown RBP11.24□□□□□ -0.61
C1orf43-208ENST00000483282 TRIM52Q96A61 297 aa11.24□□□□□ -0.61
C1orf43-208ENST00000483282 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
C1orf43-208ENST00000483282 WASHC2AQ641Q2 1341 aa11.24□□□□□ -0.61
C1orf43-208ENST00000483282 WASHC2CQ9Y4E1 1318 aa11.24□□□□□ -0.61
C1orf43-208ENST00000483282 ZMYM4Q5VZL5 1548 aa11.24□□□□□ -0.61
C1orf43-208ENST00000483282 CTTNBP2Q8WZ74 1663 aa11.24□□□□□ -0.61
C1orf43-208ENST00000483282 PRKRIP1Q9H875 184 aaPredicted RBP11.23□□□□□ -0.61
C1orf43-208ENST00000483282 ZBTB47Q9UFB7 747 aaPredicted RBP11.23□□□□□ -0.61
C1orf43-208ENST00000483282 NCOA1Q15788 1441 aa11.23□□□□□ -0.61
C1orf43-208ENST00000483282 TCERG1O14776 1098 aaKnown RBP11.22□□□□□ -0.61
C1orf43-208ENST00000483282 ABCA5Q8WWZ7 1642 aa11.22□□□□□ -0.61
C1orf43-208ENST00000483282 IPO9Q96P70 1041 aaKnown RBP11.22□□□□□ -0.61
C1orf43-208ENST00000483282 PDS5BQ9NTI5 1447 aa11.21□□□□□ -0.61
C1orf43-208ENST00000483282 SLC24A1O60721 1099 aa11.21□□□□□ -0.61
C1orf43-208ENST00000483282 SIN3AQ96ST3 1273 aa11.21□□□□□ -0.61
C1orf43-208ENST00000483282 GCC2Q8IWJ2 1684 aa11.2□□□□□ -0.62
C1orf43-208ENST00000483282 RNF123Q5XPI4 1314 aa11.2□□□□□ -0.62
C1orf43-208ENST00000483282 BCANQ96GW7 911 aa11.2□□□□□ -0.62
C1orf43-208ENST00000483282 ARHGEF11O15085 1522 aa11.19□□□□□ -0.62
C1orf43-208ENST00000483282 SAMD9Q5K651 1589 aa11.19□□□□□ -0.62
C1orf43-208ENST00000483282 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
C1orf43-208ENST00000483282 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms