RNA–Protein interactions for RNA: ENST00000482662.1

GGCX-209, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 3

Gene GGCX, Length 720 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-209ENST00000482662 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
GGCX-209ENST00000482662 SHROOM2Q13796 1616 aa18.01■□□□□ 0.47
GGCX-209ENST00000482662 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
GGCX-209ENST00000482662 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
GGCX-209ENST00000482662 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
GGCX-209ENST00000482662 JPH4Q96JJ6 628 aa17.99■□□□□ 0.47
GGCX-209ENST00000482662 ARAP1Q96P48 1450 aa17.96■□□□□ 0.47
GGCX-209ENST00000482662 PRG4Q92954 1404 aaPredicted RBP17.92■□□□□ 0.46
GGCX-209ENST00000482662 CYB5RLQ6IPT4 315 aa17.88■□□□□ 0.45
GGCX-209ENST00000482662 ERCC6L2Q5T890 1561 aa17.87■□□□□ 0.45
GGCX-209ENST00000482662 IQGAP2Q13576 1575 aa17.87■□□□□ 0.45
GGCX-209ENST00000482662 UGGT2Q9NYU1 1516 aa17.86■□□□□ 0.45
GGCX-209ENST00000482662 KIF21BO75037 1637 aa17.83■□□□□ 0.44
GGCX-209ENST00000482662 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
GGCX-209ENST00000482662 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
GGCX-209ENST00000482662 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
GGCX-209ENST00000482662 DISP1Q96F81 1524 aa17.8■□□□□ 0.44
GGCX-209ENST00000482662 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
GGCX-209ENST00000482662 GOLGA3Q08378 1498 aa17.74■□□□□ 0.43
GGCX-209ENST00000482662 PTPRGP23470 1445 aa17.73■□□□□ 0.43
GGCX-209ENST00000482662 CTTNBP2Q8WZ74 1663 aa17.72■□□□□ 0.43
GGCX-209ENST00000482662 KIAA0556O60303 1618 aa17.7■□□□□ 0.42
GGCX-209ENST00000482662 UHRF1BP1LA0JNW5 1464 aa17.67■□□□□ 0.42
GGCX-209ENST00000482662 SAMD9Q5K651 1589 aa17.64■□□□□ 0.41
GGCX-209ENST00000482662 UACAQ9BZF9 1416 aa17.63■□□□□ 0.41
GGCX-209ENST00000482662 UBTFP17480 764 aaKnown RBP17.6■□□□□ 0.41
GGCX-209ENST00000482662 EFCAB5A4FU69 1503 aa17.6■□□□□ 0.41
GGCX-209ENST00000482662 ADCY10Q96PN6 1610 aa17.59■□□□□ 0.41
GGCX-209ENST00000482662 ABCC2Q92887 1545 aa17.58■□□□□ 0.41
GGCX-209ENST00000482662 MAPKBP1O60336 1514 aa17.57■□□□□ 0.4
GGCX-209ENST00000482662 KDM5BQ9UGL1 1544 aa17.56■□□□□ 0.4
GGCX-209ENST00000482662 ABCA8O94911 1581 aa17.55■□□□□ 0.4
GGCX-209ENST00000482662 PLB1Q6P1J6 1458 aa17.54■□□□□ 0.4
GGCX-209ENST00000482662 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
GGCX-209ENST00000482662 ARHGAP35Q9NRY4 1499 aa17.51■□□□□ 0.39
GGCX-209ENST00000482662 FHOD3Q2V2M9 1422 aa17.49■□□□□ 0.39
GGCX-209ENST00000482662 P3H3Q8IVL6 736 aa17.49■□□□□ 0.39
GGCX-209ENST00000482662 ABCC10Q5T3U5 1492 aa17.47■□□□□ 0.39
GGCX-209ENST00000482662 TTBK1Q5TCY1 1321 aaPredicted RBP17.47■□□□□ 0.39
GGCX-209ENST00000482662 FMN1Q68DA7 1419 aa17.45■□□□□ 0.38
GGCX-209ENST00000482662 EHMT2Q96KQ7 1210 aa17.44■□□□□ 0.38
GGCX-209ENST00000482662 ASXL2Q76L83 1435 aa17.43■□□□□ 0.38
GGCX-209ENST00000482662 ATP10BO94823 1461 aa17.42■□□□□ 0.38
GGCX-209ENST00000482662 NUP153P49790 1475 aaKnown RBP17.42■□□□□ 0.38
GGCX-209ENST00000482662 CLIP1P30622 1438 aa17.41■□□□□ 0.38
GGCX-209ENST00000482662 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
GGCX-209ENST00000482662 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
GGCX-209ENST00000482662 RAPGEF6Q8TEU7 1601 aa17.39■□□□□ 0.37
GGCX-209ENST00000482662 WDR7Q9Y4E6 1490 aa17.37■□□□□ 0.37
GGCX-209ENST00000482662 DIP2BQ9P265 1576 aa17.37■□□□□ 0.37
GGCX-209ENST00000482662 ZCCHC11Q5TAX3 1644 aaKnown RBP17.37■□□□□ 0.37
GGCX-209ENST00000482662 GLI2P10070 1586 aa17.36■□□□□ 0.37
GGCX-209ENST00000482662 FAM69CQ0P6D2 419 aa17.35■□□□□ 0.37
GGCX-209ENST00000482662 CEP162Q5TB80 1403 aa17.35■□□□□ 0.37
GGCX-209ENST00000482662 EPRSP07814 1512 aaKnown RBP17.35■□□□□ 0.37
GGCX-209ENST00000482662 LOC105371045A0A1W2PR82 267 aa17.34■□□□□ 0.37
GGCX-209ENST00000482662 CASKIN1Q8WXD9 1431 aa17.33■□□□□ 0.36
GGCX-209ENST00000482662 FYCO1Q9BQS8 1478 aa17.27■□□□□ 0.36
GGCX-209ENST00000482662 KIF13AQ9H1H9 1805 aa17.27■□□□□ 0.36
GGCX-209ENST00000482662 HECW1Q76N89 1606 aa17.27■□□□□ 0.36
GGCX-209ENST00000482662 PLEKHD1A6NEE1 506 aa17.25■□□□□ 0.35
GGCX-209ENST00000482662 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
GGCX-209ENST00000482662 CCDC18Q5T9S5 1454 aa17.23■□□□□ 0.35
GGCX-209ENST00000482662 CDK13Q14004 1512 aaKnown RBP17.21■□□□□ 0.35
GGCX-209ENST00000482662 MAGI3Q5TCQ9 1506 aa17.21■□□□□ 0.35
GGCX-209ENST00000482662 PCF11O94913 1555 aaKnown RBP17.21■□□□□ 0.35
GGCX-209ENST00000482662 CDK11AQ9UQ88 783 aaPredicted RBP17.21■□□□□ 0.35
GGCX-209ENST00000482662 MAP3K4Q9Y6R4 1608 aa17.21■□□□□ 0.35
GGCX-209ENST00000482662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.19■□□□□ 0.34
GGCX-209ENST00000482662 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
GGCX-209ENST00000482662 CD109Q6YHK3 1445 aa17.19■□□□□ 0.34
GGCX-209ENST00000482662 KCNH8Q96L42 1107 aa17.18■□□□□ 0.34
GGCX-209ENST00000482662 TROQ12816 1431 aaPredicted RBP17.18■□□□□ 0.34
GGCX-209ENST00000482662 ABCA9Q8IUA7 1624 aa17.18■□□□□ 0.34
GGCX-209ENST00000482662 VPS8Q8N3P4 1428 aa17.17■□□□□ 0.34
GGCX-209ENST00000482662 TEX14Q8IWB6 1497 aa17.17■□□□□ 0.34
GGCX-209ENST00000482662 PHLDB1Q86UU1 1377 aa17.15■□□□□ 0.34
GGCX-209ENST00000482662 CFAP43Q8NDM7 1665 aa17.14■□□□□ 0.33
GGCX-209ENST00000482662 PPRC1Q5VV67 1664 aaKnown RBP17.13■□□□□ 0.33
GGCX-209ENST00000482662 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
GGCX-209ENST00000482662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.11■□□□□ 0.33
GGCX-209ENST00000482662 NEO1Q92859 1461 aa17.09■□□□□ 0.33
GGCX-209ENST00000482662 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
GGCX-209ENST00000482662 ARAP3Q8WWN8 1544 aa17.09■□□□□ 0.33
GGCX-209ENST00000482662 LRRIQ1Q96JM4 1722 aa17.09■□□□□ 0.33
GGCX-209ENST00000482662 PLCH2O75038 1416 aa17.08■□□□□ 0.32
GGCX-209ENST00000482662 COL17A1Q9UMD9 1497 aaPredicted RBP17.07■□□□□ 0.32
GGCX-209ENST00000482662 KIF14Q15058 1648 aa17.04■□□□□ 0.32
GGCX-209ENST00000482662 TTC37Q6PGP7 1564 aa17.04■□□□□ 0.32
GGCX-209ENST00000482662 KDM6BO15054 1643 aa17.01■□□□□ 0.31
GGCX-209ENST00000482662 MTUS2Q5JR59 1369 aa17.01■□□□□ 0.31
GGCX-209ENST00000482662 FANCAO15360 1455 aa17■□□□□ 0.31
GGCX-209ENST00000482662 EHBP1L1Q8N3D4 1523 aa17■□□□□ 0.31
GGCX-209ENST00000482662 TSPOAP1O95153 1857 aa16.99■□□□□ 0.31
GGCX-209ENST00000482662 TIAM1Q13009 1591 aa16.99■□□□□ 0.31
GGCX-209ENST00000482662 AKNAQ7Z591 1439 aa16.98■□□□□ 0.31
GGCX-209ENST00000482662 EFCAB2Q5VUJ9 269 aa16.98■□□□□ 0.31
GGCX-209ENST00000482662 LRRC9Q6ZRR7 1453 aa16.97■□□□□ 0.31
GGCX-209ENST00000482662 GPATCH8Q9UKJ3 1502 aaKnown RBP16.96■□□□□ 0.31
GGCX-209ENST00000482662 CFAP74Q9C0B2 1584 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms