RNA–Protein interactions for RNA: ENST00000482657.1

LCNL1-204, Transcript of lipocalin like 1, humanhuman

TSL 2

Gene LCNL1, Length 3,706 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-204ENST00000482657 IRX6P78412 446 aaPredicted RBP21.56■■□□□ 1.04
LCNL1-204ENST00000482657 TONSLQ96HA7 1378 aa21.55■■□□□ 1.04
LCNL1-204ENST00000482657 RRP7BPQ9NSQ0 103 aa21.55■■□□□ 1.04
LCNL1-204ENST00000482657 MTUS2Q5JR59 1369 aa21.54■■□□□ 1.04
LCNL1-204ENST00000482657 PRXQ9BXM0 1461 aa21.52■■□□□ 1.04
LCNL1-204ENST00000482657 IGF1RP08069 1367 aa21.52■■□□□ 1.04
LCNL1-204ENST00000482657 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
LCNL1-204ENST00000482657 CUX1P39880 1505 aa21.51■■□□□ 1.03
LCNL1-204ENST00000482657 FHOD3Q2V2M9 1422 aa21.48■■□□□ 1.03
LCNL1-204ENST00000482657 ZNF326Q5BKZ1 582 aaKnown RBP21.47■■□□□ 1.03
LCNL1-204ENST00000482657 ARHGAP35Q9NRY4 1499 aa21.47■■□□□ 1.03
LCNL1-204ENST00000482657 SETD5Q9C0A6 1442 aa21.47■■□□□ 1.03
LCNL1-204ENST00000482657 PEG3Q9GZU2 1588 aa21.46■■□□□ 1.03
LCNL1-204ENST00000482657 CADPSQ9ULU8 1353 aa21.46■■□□□ 1.03
LCNL1-204ENST00000482657 HNRNPUQ00839 825 aaKnown RBP eCLIP21.46■■□□□ 1.03
LCNL1-204ENST00000482657 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
LCNL1-204ENST00000482657 FBLN2P98095 1184 aa21.42■■□□□ 1.02
LCNL1-204ENST00000482657 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
LCNL1-204ENST00000482657 PHLDB1Q86UU1 1377 aa21.4■■□□□ 1.02
LCNL1-204ENST00000482657 CDK11AQ9UQ88 783 aaPredicted RBP21.4■■□□□ 1.02
LCNL1-204ENST00000482657 RBM19Q9Y4C8 960 aaKnown RBP21.39■■□□□ 1.01
LCNL1-204ENST00000482657 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
LCNL1-204ENST00000482657 FHAD1B1AJZ9 1412 aa21.36■■□□□ 1.01
LCNL1-204ENST00000482657 ERICH3Q5RHP9 1530 aa21.36■■□□□ 1.01
LCNL1-204ENST00000482657 ZNF777Q9ULD5 760 aaPredicted RBP21.36■■□□□ 1.01
LCNL1-204ENST00000482657 CFTRP13569 1480 aa21.36■■□□□ 1.01
LCNL1-204ENST00000482657 RAD54L2Q9Y4B4 1467 aa21.36■■□□□ 1.01
LCNL1-204ENST00000482657 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
LCNL1-204ENST00000482657 BCL11AQ9H165 835 aa21.34■■□□□ 1.01
LCNL1-204ENST00000482657 RRBP1Q9P2E9 1410 aaKnown RBP21.33■■□□□ 1
LCNL1-204ENST00000482657 FOXD1Q16676 465 aa21.31■■□□□ 1
LCNL1-204ENST00000482657 FAM9BQ8IZU0 186 aa21.3■■□□□ 1
LCNL1-204ENST00000482657 PPP1R15AO75807 674 aaPredicted RBP21.29■■□□□ 1
LCNL1-204ENST00000482657 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
LCNL1-204ENST00000482657 LRRC9Q6ZRR7 1453 aa21.23■□□□□ 0.99
LCNL1-204ENST00000482657 NESP48681 1621 aa21.19■□□□□ 0.98
LCNL1-204ENST00000482657 HMGXB3Q12766 1538 aa21.18■□□□□ 0.98
LCNL1-204ENST00000482657 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
LCNL1-204ENST00000482657 DNAJC5BQ9UF47 199 aa21.15■□□□□ 0.98
LCNL1-204ENST00000482657 EIF4G2P78344 907 aaKnown RBP eCLIP21.14■□□□□ 0.97
LCNL1-204ENST00000482657 SLC4A1APQ9BWU0 796 aaKnown RBP21.13■□□□□ 0.97
LCNL1-204ENST00000482657 MRS2Q9HD23 443 aa21.12■□□□□ 0.97
LCNL1-204ENST00000482657 CCER2I3L3R5 266 aa21.11■□□□□ 0.97
LCNL1-204ENST00000482657 HSPA5P11021 654 aaKnown RBP21.11■□□□□ 0.97
LCNL1-204ENST00000482657 TIAM1Q13009 1591 aa21.1■□□□□ 0.97
LCNL1-204ENST00000482657 WDR97A6NE52 1622 aa21.1■□□□□ 0.97
LCNL1-204ENST00000482657 NBR1Q14596 966 aa21.09■□□□□ 0.97
LCNL1-204ENST00000482657 FMN1Q68DA7 1419 aa21.08■□□□□ 0.97
LCNL1-204ENST00000482657 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
LCNL1-204ENST00000482657 B4GALNT3Q6L9W6 998 aa21.06■□□□□ 0.96
LCNL1-204ENST00000482657 KDM2AQ9Y2K7 1162 aa21.05■□□□□ 0.96
LCNL1-204ENST00000482657 SALL2Q9Y467 1007 aaPredicted RBP21.03■□□□□ 0.96
LCNL1-204ENST00000482657 CCDC18Q5T9S5 1454 aa21.02■□□□□ 0.96
LCNL1-204ENST00000482657 FGD6Q6ZV73 1430 aa21.02■□□□□ 0.96
LCNL1-204ENST00000482657 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
LCNL1-204ENST00000482657 MPHOSPH9Q99550 1183 aa21.01■□□□□ 0.95
LCNL1-204ENST00000482657 POLA1P09884 1462 aaPredicted RBP21■□□□□ 0.95
LCNL1-204ENST00000482657 PCF11O94913 1555 aaKnown RBP20.98■□□□□ 0.95
LCNL1-204ENST00000482657 MAPKBP1O60336 1514 aa20.97■□□□□ 0.95
LCNL1-204ENST00000482657 CC2D2AQ9P2K1 1620 aa20.97■□□□□ 0.95
LCNL1-204ENST00000482657 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
LCNL1-204ENST00000482657 CFDP1Q9UEE9 299 aaPredicted RBP20.95■□□□□ 0.94
LCNL1-204ENST00000482657 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
LCNL1-204ENST00000482657 CASKIN1Q8WXD9 1431 aa20.94■□□□□ 0.94
LCNL1-204ENST00000482657 RTL5Q5HYW3 569 aaPredicted RBP20.94■□□□□ 0.94
LCNL1-204ENST00000482657 ZNF644Q9H582 1327 aaPredicted RBP20.93■□□□□ 0.94
LCNL1-204ENST00000482657 NPM2Q86SE8 214 aaKnown RBP20.92■□□□□ 0.94
LCNL1-204ENST00000482657 PPP4R2Q9NY27 417 aa20.91■□□□□ 0.94
LCNL1-204ENST00000482657 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
LCNL1-204ENST00000482657 MYT1LQ9UL68 1186 aa20.89■□□□□ 0.94
LCNL1-204ENST00000482657 MSH5O43196 834 aa20.88■□□□□ 0.93
LCNL1-204ENST00000482657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.88■□□□□ 0.93
LCNL1-204ENST00000482657 NCOA2Q15596 1464 aa20.88■□□□□ 0.93
LCNL1-204ENST00000482657 CCDC136Q96JN2 1154 aa20.88■□□□□ 0.93
LCNL1-204ENST00000482657 PDS5BQ9NTI5 1447 aa20.88■□□□□ 0.93
LCNL1-204ENST00000482657 FYCO1Q9BQS8 1478 aa20.87■□□□□ 0.93
LCNL1-204ENST00000482657 AQRO60306 1485 aaKnown RBP eCLIP20.85■□□□□ 0.93
LCNL1-204ENST00000482657 MYOM3Q5VTT5 1437 aa20.85■□□□□ 0.93
LCNL1-204ENST00000482657 UACAQ9BZF9 1416 aa20.84■□□□□ 0.93
LCNL1-204ENST00000482657 ANP32AP39687 249 aaKnown RBP20.84■□□□□ 0.93
LCNL1-204ENST00000482657 CCDC184Q52MB2 194 aa20.84■□□□□ 0.93
LCNL1-204ENST00000482657 WASHC2AQ641Q2 1341 aa20.84■□□□□ 0.93
LCNL1-204ENST00000482657 RGL3Q3MIN7 710 aa20.84■□□□□ 0.93
LCNL1-204ENST00000482657 PTPRKQ15262 1439 aa20.83■□□□□ 0.92
LCNL1-204ENST00000482657 TMC1Q8TDI8 760 aa20.83■□□□□ 0.92
LCNL1-204ENST00000482657 TSPY4P0CV99 314 aa20.79■□□□□ 0.92
LCNL1-204ENST00000482657 TSPY10P0CW01 314 aa20.79■□□□□ 0.92
LCNL1-204ENST00000482657 PKD2Q13563 968 aa20.79■□□□□ 0.92
LCNL1-204ENST00000482657 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
LCNL1-204ENST00000482657 DEKP35659 375 aaKnown RBP20.78■□□□□ 0.92
LCNL1-204ENST00000482657 NAIPQ13075 1403 aa20.77■□□□□ 0.92
LCNL1-204ENST00000482657 DNMBPQ6XZF7 1577 aa20.77■□□□□ 0.92
LCNL1-204ENST00000482657 PLEKHD1A6NEE1 506 aa20.75■□□□□ 0.91
LCNL1-204ENST00000482657 HFM1A2PYH4 1435 aa20.75■□□□□ 0.91
LCNL1-204ENST00000482657 MAP3K1Q13233 1512 aa20.75■□□□□ 0.91
LCNL1-204ENST00000482657 CARD11Q9BXL7 1154 aa20.75■□□□□ 0.91
LCNL1-204ENST00000482657 C11orf95C9JLR9 678 aaPredicted RBP20.73■□□□□ 0.91
LCNL1-204ENST00000482657 NBPF8Q3BBV2 869 aa20.73■□□□□ 0.91
LCNL1-204ENST00000482657 ZBTB47Q9UFB7 747 aaPredicted RBP20.73■□□□□ 0.91
LCNL1-204ENST00000482657 NOP58Q9Y2X3 529 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms