RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 JPH4Q96JJ6 628 aa34.88■■■■□ 3.17
SEC13-217ENST00000482647 KIAA0586Q9BVV6 1533 aa34.86■■■■□ 3.17
SEC13-217ENST00000482647 CYB5RLQ6IPT4 315 aa34.85■■■■□ 3.17
SEC13-217ENST00000482647 PRXQ9BXM0 1461 aa34.83■■■■□ 3.17
SEC13-217ENST00000482647 FAM9AQ8IZU1 332 aaPredicted RBP34.82■■■■□ 3.16
SEC13-217ENST00000482647 ARAP1Q96P48 1450 aa34.78■■■■□ 3.16
SEC13-217ENST00000482647 SHROOM2Q13796 1616 aa34.77■■■■□ 3.16
SEC13-217ENST00000482647 PRG4Q92954 1404 aaPredicted RBP34.75■■■■□ 3.15
SEC13-217ENST00000482647 ERCC6L2Q5T890 1561 aa34.68■■■■□ 3.14
SEC13-217ENST00000482647 IQGAP2Q13576 1575 aa34.62■■■■□ 3.13
SEC13-217ENST00000482647 CARMIL2Q6F5E8 1435 aa34.53■■■■□ 3.12
SEC13-217ENST00000482647 UGGT2Q9NYU1 1516 aa34.45■■■■□ 3.11
SEC13-217ENST00000482647 KIF21BO75037 1637 aa34.44■■■■□ 3.1
SEC13-217ENST00000482647 CTTNBP2Q8WZ74 1663 aa34.42■■■■□ 3.1
SEC13-217ENST00000482647 TNIKQ9UKE5 1360 aa34.4■■■■□ 3.1
SEC13-217ENST00000482647 DISP1Q96F81 1524 aa34.39■■■■□ 3.1
SEC13-217ENST00000482647 PTPRGP23470 1445 aa34.38■■■■□ 3.09
SEC13-217ENST00000482647 TTBK1Q5TCY1 1321 aaPredicted RBP34.34■■■■□ 3.09
SEC13-217ENST00000482647 EHMT2Q96KQ7 1210 aa34.34■■■■□ 3.09
SEC13-217ENST00000482647 GOLGA3Q08378 1498 aa34.33■■■■□ 3.09
SEC13-217ENST00000482647 UBTFP17480 764 aaKnown RBP34.33■■■■□ 3.09
SEC13-217ENST00000482647 KIAA0556O60303 1618 aa34.26■■■■□ 3.08
SEC13-217ENST00000482647 NPM1P06748 294 aaKnown RBP eCLIP34.21■■■■□ 3.07
SEC13-217ENST00000482647 RANGAP1P46060 587 aaPredicted RBP34.21■■■■□ 3.07
SEC13-217ENST00000482647 P3H3Q8IVL6 736 aa34.17■■■■□ 3.06
SEC13-217ENST00000482647 UACAQ9BZF9 1416 aa34.13■■■■□ 3.05
SEC13-217ENST00000482647 TRHP20396 242 aaPredicted RBP34.12■■■■□ 3.05
SEC13-217ENST00000482647 ADCY10Q96PN6 1610 aa34.1■■■■□ 3.05
SEC13-217ENST00000482647 UHRF1BP1LA0JNW5 1464 aa34.07■■■■□ 3.04
SEC13-217ENST00000482647 SAMD9Q5K651 1589 aa34.06■■■■□ 3.04
SEC13-217ENST00000482647 ABCC2Q92887 1545 aa34■■■■□ 3.03
SEC13-217ENST00000482647 EFCAB5A4FU69 1503 aa33.99■■■■□ 3.03
SEC13-217ENST00000482647 PLB1Q6P1J6 1458 aa33.98■■■■□ 3.03
SEC13-217ENST00000482647 FHOD3Q2V2M9 1422 aa33.95■■■■□ 3.02
SEC13-217ENST00000482647 MAPKBP1O60336 1514 aa33.91■■■■□ 3.02
SEC13-217ENST00000482647 ABCA8O94911 1581 aa33.9■■■■□ 3.02
SEC13-217ENST00000482647 KDM5BQ9UGL1 1544 aa33.89■■■■□ 3.02
SEC13-217ENST00000482647 ARHGAP35Q9NRY4 1499 aa33.84■■■■□ 3.01
SEC13-217ENST00000482647 FAM69CQ0P6D2 419 aa33.79■■■■□ 3
SEC13-217ENST00000482647 ASXL2Q76L83 1435 aa33.79■■■■□ 3
SEC13-217ENST00000482647 ABCC10Q5T3U5 1492 aa33.77■■■■□ 3
SEC13-217ENST00000482647 LOC105371045A0A1W2PR82 267 aa33.77■■■■□ 3
SEC13-217ENST00000482647 ARID3CA6NKF2 412 aa33.75■■■□□ 2.99
SEC13-217ENST00000482647 FMN1Q68DA7 1419 aa33.74■■■□□ 2.99
SEC13-217ENST00000482647 ZCCHC11Q5TAX3 1644 aaKnown RBP33.74■■■□□ 2.99
SEC13-217ENST00000482647 CLIP1P30622 1438 aa33.73■■■□□ 2.99
SEC13-217ENST00000482647 RAPGEF6Q8TEU7 1601 aa33.73■■■□□ 2.99
SEC13-217ENST00000482647 ATP10BO94823 1461 aa33.69■■■□□ 2.98
SEC13-217ENST00000482647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.67■■■□□ 2.98
SEC13-217ENST00000482647 HNRNPUL2Q1KMD3 747 aaKnown RBP33.67■■■□□ 2.98
SEC13-217ENST00000482647 NUP153P49790 1475 aaKnown RBP33.66■■■□□ 2.98
SEC13-217ENST00000482647 DIP2BQ9P265 1576 aa33.64■■■□□ 2.98
SEC13-217ENST00000482647 ATP1B4Q9UN42 357 aaPredicted RBP33.62■■■□□ 2.97
SEC13-217ENST00000482647 WDR7Q9Y4E6 1490 aa33.62■■■□□ 2.97
SEC13-217ENST00000482647 KIF13AQ9H1H9 1805 aa33.59■■■□□ 2.97
SEC13-217ENST00000482647 CEP162Q5TB80 1403 aa33.59■■■□□ 2.97
SEC13-217ENST00000482647 KCNH8Q96L42 1107 aa33.57■■■□□ 2.96
SEC13-217ENST00000482647 EPRSP07814 1512 aaKnown RBP33.57■■■□□ 2.96
SEC13-217ENST00000482647 GLI2P10070 1586 aa33.53■■■□□ 2.96
SEC13-217ENST00000482647 PLEKHD1A6NEE1 506 aa33.51■■■□□ 2.95
SEC13-217ENST00000482647 CASKIN1Q8WXD9 1431 aa33.47■■■□□ 2.95
SEC13-217ENST00000482647 HECW1Q76N89 1606 aa33.46■■■□□ 2.95
SEC13-217ENST00000482647 CDK11AQ9UQ88 783 aaPredicted RBP33.42■■■□□ 2.94
SEC13-217ENST00000482647 CDK13Q14004 1512 aaKnown RBP33.4■■■□□ 2.94
SEC13-217ENST00000482647 FYCO1Q9BQS8 1478 aa33.36■■■□□ 2.93
SEC13-217ENST00000482647 PCF11O94913 1555 aaKnown RBP33.35■■■□□ 2.93
SEC13-217ENST00000482647 CD109Q6YHK3 1445 aa33.35■■■□□ 2.93
SEC13-217ENST00000482647 MAP3K4Q9Y6R4 1608 aa33.32■■■□□ 2.92
SEC13-217ENST00000482647 TSPOAP1O95153 1857 aa33.31■■■□□ 2.92
SEC13-217ENST00000482647 CCDC18Q5T9S5 1454 aa33.31■■■□□ 2.92
SEC13-217ENST00000482647 TEX14Q8IWB6 1497 aa33.27■■■□□ 2.92
SEC13-217ENST00000482647 CFAP43Q8NDM7 1665 aa33.24■■■□□ 2.91
SEC13-217ENST00000482647 MAGI3Q5TCQ9 1506 aa33.23■■■□□ 2.91
SEC13-217ENST00000482647 ABCA9Q8IUA7 1624 aa33.21■■■□□ 2.91
SEC13-217ENST00000482647 TROQ12816 1431 aaPredicted RBP33.2■■■□□ 2.91
SEC13-217ENST00000482647 PPRC1Q5VV67 1664 aaKnown RBP33.2■■■□□ 2.91
SEC13-217ENST00000482647 LRRIQ1Q96JM4 1722 aa33.18■■■□□ 2.9
SEC13-217ENST00000482647 VPS8Q8N3P4 1428 aa33.18■■■□□ 2.9
SEC13-217ENST00000482647 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.12■■■□□ 2.89
SEC13-217ENST00000482647 KDM6BO15054 1643 aa33.1■■■□□ 2.89
SEC13-217ENST00000482647 PHLDB1Q86UU1 1377 aa33.07■■■□□ 2.88
SEC13-217ENST00000482647 KIF14Q15058 1648 aa33.06■■■□□ 2.88
SEC13-217ENST00000482647 TTC37Q6PGP7 1564 aa33.04■■■□□ 2.88
SEC13-217ENST00000482647 MTUS2Q5JR59 1369 aa33.03■■■□□ 2.88
SEC13-217ENST00000482647 PLCH2O75038 1416 aa33.02■■■□□ 2.88
SEC13-217ENST00000482647 NEO1Q92859 1461 aa33.01■■■□□ 2.88
SEC13-217ENST00000482647 COL17A1Q9UMD9 1497 aaPredicted RBP33.01■■■□□ 2.88
SEC13-217ENST00000482647 EFCAB2Q5VUJ9 269 aa32.96■■■□□ 2.87
SEC13-217ENST00000482647 FANCAO15360 1455 aa32.96■■■□□ 2.87
SEC13-217ENST00000482647 ARAP3Q8WWN8 1544 aa32.95■■■□□ 2.87
SEC13-217ENST00000482647 APLP2Q06481 763 aa32.92■■■□□ 2.86
SEC13-217ENST00000482647 AKNAQ7Z591 1439 aa32.92■■■□□ 2.86
SEC13-217ENST00000482647 TIAM1Q13009 1591 aa32.88■■■□□ 2.85
SEC13-217ENST00000482647 EHBP1L1Q8N3D4 1523 aa32.87■■■□□ 2.85
SEC13-217ENST00000482647 MAP3K1Q13233 1512 aa32.87■■■□□ 2.85
SEC13-217ENST00000482647 CFAP74Q9C0B2 1584 aa32.86■■■□□ 2.85
SEC13-217ENST00000482647 MYO5CQ9NQX4 1742 aa32.85■■■□□ 2.85
SEC13-217ENST00000482647 RAPGEF3O95398 923 aa32.85■■■□□ 2.85
SEC13-217ENST00000482647 ARHGAP5Q13017 1502 aa32.84■■■□□ 2.85
SEC13-217ENST00000482647 CCNB3Q8WWL7 1395 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms