RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 GOLGA3Q08378 1498 aa32.6■■■□□ 2.81
TRAPPC12-220ENST00000482645 DNAJC5Q9H3Z4 198 aa32.58■■■□□ 2.81
TRAPPC12-220ENST00000482645 CTTNBP2Q8WZ74 1663 aa32.58■■■□□ 2.81
TRAPPC12-220ENST00000482645 UBTFP17480 764 aaKnown RBP32.56■■■□□ 2.8
TRAPPC12-220ENST00000482645 IQGAP2Q13576 1575 aa32.54■■■□□ 2.8
TRAPPC12-220ENST00000482645 JPH4Q96JJ6 628 aa32.5■■■□□ 2.79
TRAPPC12-220ENST00000482645 SHROOM2Q13796 1616 aa32.46■■■□□ 2.79
TRAPPC12-220ENST00000482645 ARHGEF11O15085 1522 aa32.42■■■□□ 2.78
TRAPPC12-220ENST00000482645 RANGAP1P46060 587 aaPredicted RBP32.41■■■□□ 2.78
TRAPPC12-220ENST00000482645 PRG4Q92954 1404 aaPredicted RBP32.41■■■□□ 2.78
TRAPPC12-220ENST00000482645 RIMBP3CA6NJZ7 1639 aa32.38■■■□□ 2.77
TRAPPC12-220ENST00000482645 RIMBP3BA6NNM3 1639 aa32.38■■■□□ 2.77
TRAPPC12-220ENST00000482645 RIMBP3Q9UFD9 1639 aa32.38■■■□□ 2.77
TRAPPC12-220ENST00000482645 ERCC6L2Q5T890 1561 aa32.38■■■□□ 2.77
TRAPPC12-220ENST00000482645 LOC105371045A0A1W2PR82 267 aa32.37■■■□□ 2.77
TRAPPC12-220ENST00000482645 UGGT2Q9NYU1 1516 aa32.33■■■□□ 2.77
TRAPPC12-220ENST00000482645 CARMIL2Q6F5E8 1435 aa32.27■■■□□ 2.76
TRAPPC12-220ENST00000482645 DISP1Q96F81 1524 aa32.25■■■□□ 2.75
TRAPPC12-220ENST00000482645 TNIKQ9UKE5 1360 aa32.24■■■□□ 2.75
TRAPPC12-220ENST00000482645 TTBK1Q5TCY1 1321 aaPredicted RBP32.23■■■□□ 2.75
TRAPPC12-220ENST00000482645 KIAA0556O60303 1618 aa32.22■■■□□ 2.75
TRAPPC12-220ENST00000482645 P3H3Q8IVL6 736 aa32.2■■■□□ 2.74
TRAPPC12-220ENST00000482645 ARAP1Q96P48 1450 aa32.2■■■□□ 2.74
TRAPPC12-220ENST00000482645 CYB5RLQ6IPT4 315 aa32.16■■■□□ 2.74
TRAPPC12-220ENST00000482645 SAMD9Q5K651 1589 aa32.14■■■□□ 2.74
TRAPPC12-220ENST00000482645 EFCAB5A4FU69 1503 aa32.1■■■□□ 2.73
TRAPPC12-220ENST00000482645 PTPRGP23470 1445 aa32.08■■■□□ 2.73
TRAPPC12-220ENST00000482645 FHOD3Q2V2M9 1422 aa32.06■■■□□ 2.72
TRAPPC12-220ENST00000482645 CLIP1P30622 1438 aa32.05■■■□□ 2.72
TRAPPC12-220ENST00000482645 ARHGAP35Q9NRY4 1499 aa32.04■■■□□ 2.72
TRAPPC12-220ENST00000482645 CEP162Q5TB80 1403 aa32.03■■■□□ 2.72
TRAPPC12-220ENST00000482645 PLB1Q6P1J6 1458 aa31.89■■■□□ 2.69
TRAPPC12-220ENST00000482645 UACAQ9BZF9 1416 aa31.87■■■□□ 2.69
TRAPPC12-220ENST00000482645 ADCY10Q96PN6 1610 aa31.84■■■□□ 2.69
TRAPPC12-220ENST00000482645 FMN1Q68DA7 1419 aa31.81■■■□□ 2.68
TRAPPC12-220ENST00000482645 ABCA8O94911 1581 aa31.8■■■□□ 2.68
TRAPPC12-220ENST00000482645 ABCC2Q92887 1545 aa31.8■■■□□ 2.68
TRAPPC12-220ENST00000482645 RAPGEF6Q8TEU7 1601 aa31.77■■■□□ 2.68
TRAPPC12-220ENST00000482645 UHRF1BP1LA0JNW5 1464 aa31.75■■■□□ 2.67
TRAPPC12-220ENST00000482645 ARID3CA6NKF2 412 aa31.75■■■□□ 2.67
TRAPPC12-220ENST00000482645 ATP1B4Q9UN42 357 aaPredicted RBP31.75■■■□□ 2.67
TRAPPC12-220ENST00000482645 NPM1P06748 294 aaKnown RBP eCLIP31.72■■■□□ 2.67
TRAPPC12-220ENST00000482645 PCF11O94913 1555 aaKnown RBP31.67■■■□□ 2.66
TRAPPC12-220ENST00000482645 NUP153P49790 1475 aaKnown RBP31.65■■■□□ 2.66
TRAPPC12-220ENST00000482645 HECW1Q76N89 1606 aa31.63■■■□□ 2.65
TRAPPC12-220ENST00000482645 ZCCHC11Q5TAX3 1644 aaKnown RBP31.63■■■□□ 2.65
TRAPPC12-220ENST00000482645 KDM5BQ9UGL1 1544 aa31.62■■■□□ 2.65
TRAPPC12-220ENST00000482645 CASKIN1Q8WXD9 1431 aa31.61■■■□□ 2.65
TRAPPC12-220ENST00000482645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.6■■■□□ 2.65
TRAPPC12-220ENST00000482645 HNRNPUL2Q1KMD3 747 aaKnown RBP31.6■■■□□ 2.65
TRAPPC12-220ENST00000482645 VPS8Q8N3P4 1428 aa31.58■■■□□ 2.65
TRAPPC12-220ENST00000482645 FYCO1Q9BQS8 1478 aa31.57■■■□□ 2.65
TRAPPC12-220ENST00000482645 ATP10BO94823 1461 aa31.56■■■□□ 2.64
TRAPPC12-220ENST00000482645 CDK13Q14004 1512 aaKnown RBP31.54■■■□□ 2.64
TRAPPC12-220ENST00000482645 EPRSP07814 1512 aaKnown RBP31.52■■■□□ 2.64
TRAPPC12-220ENST00000482645 LRRIQ1Q96JM4 1722 aa31.5■■■□□ 2.63
TRAPPC12-220ENST00000482645 MAPKBP1O60336 1514 aa31.49■■■□□ 2.63
TRAPPC12-220ENST00000482645 ASXL2Q76L83 1435 aa31.48■■■□□ 2.63
TRAPPC12-220ENST00000482645 CCDC18Q5T9S5 1454 aa31.44■■■□□ 2.62
TRAPPC12-220ENST00000482645 WDR7Q9Y4E6 1490 aa31.39■■■□□ 2.62
TRAPPC12-220ENST00000482645 TRHP20396 242 aaPredicted RBP31.38■■■□□ 2.61
TRAPPC12-220ENST00000482645 PLEKHD1A6NEE1 506 aa31.37■■■□□ 2.61
TRAPPC12-220ENST00000482645 KCNH8Q96L42 1107 aa31.36■■■□□ 2.61
TRAPPC12-220ENST00000482645 CDK11AQ9UQ88 783 aaPredicted RBP31.34■■■□□ 2.61
TRAPPC12-220ENST00000482645 APLP2Q06481 763 aa31.29■■■□□ 2.6
TRAPPC12-220ENST00000482645 ABCC10Q5T3U5 1492 aa31.29■■■□□ 2.6
TRAPPC12-220ENST00000482645 DIP2BQ9P265 1576 aa31.29■■■□□ 2.6
TRAPPC12-220ENST00000482645 FAM69CQ0P6D2 419 aa31.29■■■□□ 2.6
TRAPPC12-220ENST00000482645 CFAP43Q8NDM7 1665 aa31.28■■■□□ 2.6
TRAPPC12-220ENST00000482645 TIAM1Q13009 1591 aa31.27■■■□□ 2.6
TRAPPC12-220ENST00000482645 MAGI3Q5TCQ9 1506 aa31.25■■■□□ 2.59
TRAPPC12-220ENST00000482645 KIF13AQ9H1H9 1805 aa31.24■■■□□ 2.59
TRAPPC12-220ENST00000482645 TROQ12816 1431 aaPredicted RBP31.23■■■□□ 2.59
TRAPPC12-220ENST00000482645 MTUS2Q5JR59 1369 aa31.22■■■□□ 2.59
TRAPPC12-220ENST00000482645 MAP3K1Q13233 1512 aa31.16■■■□□ 2.58
TRAPPC12-220ENST00000482645 KIF14Q15058 1648 aa31.16■■■□□ 2.58
TRAPPC12-220ENST00000482645 GLI2P10070 1586 aa31.15■■■□□ 2.58
TRAPPC12-220ENST00000482645 EHBP1L1Q8N3D4 1523 aa31.14■■■□□ 2.58
TRAPPC12-220ENST00000482645 KANK4Q5T7N3 995 aaPredicted RBP31.14■■■□□ 2.57
TRAPPC12-220ENST00000482645 LRRC9Q6ZRR7 1453 aa31.12■■■□□ 2.57
TRAPPC12-220ENST00000482645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.11■■■□□ 2.57
TRAPPC12-220ENST00000482645 TSPOAP1O95153 1857 aa31.1■■■□□ 2.57
TRAPPC12-220ENST00000482645 ABCA9Q8IUA7 1624 aa31.09■■■□□ 2.57
TRAPPC12-220ENST00000482645 TTC37Q6PGP7 1564 aa31.09■■■□□ 2.57
TRAPPC12-220ENST00000482645 MAP3K4Q9Y6R4 1608 aa31.07■■■□□ 2.57
TRAPPC12-220ENST00000482645 CD109Q6YHK3 1445 aa31.06■■■□□ 2.56
TRAPPC12-220ENST00000482645 PPARGC1BQ86YN6 1023 aaKnown RBP31.03■■■□□ 2.56
TRAPPC12-220ENST00000482645 SUPT6HQ7KZ85 1726 aaKnown RBP31.02■■■□□ 2.56
TRAPPC12-220ENST00000482645 NCOA2Q15596 1464 aa30.97■■■□□ 2.55
TRAPPC12-220ENST00000482645 MYO5CQ9NQX4 1742 aa30.97■■■□□ 2.55
TRAPPC12-220ENST00000482645 PPRC1Q5VV67 1664 aaKnown RBP30.95■■■□□ 2.55
TRAPPC12-220ENST00000482645 CCNB3Q8WWL7 1395 aa30.93■■■□□ 2.54
TRAPPC12-220ENST00000482645 TEX14Q8IWB6 1497 aa30.9■■■□□ 2.54
TRAPPC12-220ENST00000482645 CDC42BPAQ5VT25 1732 aa30.9■■■□□ 2.54
TRAPPC12-220ENST00000482645 PLCH2O75038 1416 aa30.89■■■□□ 2.54
TRAPPC12-220ENST00000482645 ARHGAP5Q13017 1502 aa30.88■■■□□ 2.53
TRAPPC12-220ENST00000482645 PREX2Q70Z35 1606 aa30.88■■■□□ 2.53
TRAPPC12-220ENST00000482645 GPATCH8Q9UKJ3 1502 aaKnown RBP30.87■■■□□ 2.53
TRAPPC12-220ENST00000482645 CDC42BPBQ9Y5S2 1711 aa30.85■■■□□ 2.53
TRAPPC12-220ENST00000482645 FANCAO15360 1455 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms