RNA–Protein interactions for RNA: ENST00000482527.1

ABCB1-205, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 4

Gene ABCB1, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-205ENST00000482527 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
ABCB1-205ENST00000482527 ARHGAP35Q9NRY4 1499 aa13.45□□□□□ -0.26
ABCB1-205ENST00000482527 PPP1R15AO75807 674 aaPredicted RBP13.45□□□□□ -0.26
ABCB1-205ENST00000482527 FKBP8Q14318 412 aa13.45□□□□□ -0.26
ABCB1-205ENST00000482527 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
ABCB1-205ENST00000482527 NCAPD3P42695 1498 aa13.44□□□□□ -0.26
ABCB1-205ENST00000482527 RANGAP1P46060 587 aaPredicted RBP13.43□□□□□ -0.26
ABCB1-205ENST00000482527 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
ABCB1-205ENST00000482527 MAPKBP1O60336 1514 aa13.41□□□□□ -0.26
ABCB1-205ENST00000482527 DDX10Q13206 875 aaKnown RBP13.39□□□□□ -0.27
ABCB1-205ENST00000482527 RBM19Q9Y4C8 960 aaKnown RBP13.39□□□□□ -0.27
ABCB1-205ENST00000482527 LRRC9Q6ZRR7 1453 aa13.39□□□□□ -0.27
ABCB1-205ENST00000482527 CUX1P39880 1505 aa13.38□□□□□ -0.27
ABCB1-205ENST00000482527 FANCIQ9NVI1 1328 aa13.38□□□□□ -0.27
ABCB1-205ENST00000482527 CFTRP13569 1480 aa13.37□□□□□ -0.27
ABCB1-205ENST00000482527 CDK11AQ9UQ88 783 aaPredicted RBP13.35□□□□□ -0.27
ABCB1-205ENST00000482527 IGF1RP08069 1367 aa13.34□□□□□ -0.27
ABCB1-205ENST00000482527 BCL11AQ9H165 835 aa13.34□□□□□ -0.27
ABCB1-205ENST00000482527 AQRO60306 1485 aaKnown RBP eCLIP13.34□□□□□ -0.27
ABCB1-205ENST00000482527 ITGAEP38570 1179 aa13.33□□□□□ -0.28
ABCB1-205ENST00000482527 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
ABCB1-205ENST00000482527 WDR97A6NE52 1622 aa13.31□□□□□ -0.28
ABCB1-205ENST00000482527 TONSLQ96HA7 1378 aa13.31□□□□□ -0.28
ABCB1-205ENST00000482527 ERICH6Q7L0X2 663 aa13.29□□□□□ -0.28
ABCB1-205ENST00000482527 EFCAB5A4FU69 1503 aa13.29□□□□□ -0.28
ABCB1-205ENST00000482527 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
ABCB1-205ENST00000482527 BCANQ96GW7 911 aa13.27□□□□□ -0.29
ABCB1-205ENST00000482527 KCNH8Q96L42 1107 aa13.27□□□□□ -0.29
ABCB1-205ENST00000482527 PHLDB1Q86UU1 1377 aa13.27□□□□□ -0.29
ABCB1-205ENST00000482527 FYCO1Q9BQS8 1478 aa13.27□□□□□ -0.29
ABCB1-205ENST00000482527 CFAP43Q8NDM7 1665 aa13.27□□□□□ -0.29
ABCB1-205ENST00000482527 SIN3AQ96ST3 1273 aa13.26□□□□□ -0.29
ABCB1-205ENST00000482527 CASKIN1Q8WXD9 1431 aa13.25□□□□□ -0.29
ABCB1-205ENST00000482527 UACAQ9BZF9 1416 aa13.24□□□□□ -0.29
ABCB1-205ENST00000482527 PPP4R2Q9NY27 417 aa13.24□□□□□ -0.29
ABCB1-205ENST00000482527 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
ABCB1-205ENST00000482527 PRDM2Q13029 1718 aa13.23□□□□□ -0.29
ABCB1-205ENST00000482527 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
ABCB1-205ENST00000482527 HFM1A2PYH4 1435 aa13.21□□□□□ -0.3
ABCB1-205ENST00000482527 ERCC6Q03468 1493 aa13.2□□□□□ -0.3
ABCB1-205ENST00000482527 TRIM52Q96A61 297 aa13.19□□□□□ -0.3
ABCB1-205ENST00000482527 CADPSQ9ULU8 1353 aa13.19□□□□□ -0.3
ABCB1-205ENST00000482527 FGD6Q6ZV73 1430 aa13.17□□□□□ -0.3
ABCB1-205ENST00000482527 HNRNPUQ00839 825 aaKnown RBP eCLIP13.16□□□□□ -0.3
ABCB1-205ENST00000482527 CCDC18Q5T9S5 1454 aa13.16□□□□□ -0.3
ABCB1-205ENST00000482527 EIF4G2P78344 907 aaKnown RBP eCLIP13.13□□□□□ -0.31
ABCB1-205ENST00000482527 PCF11O94913 1555 aaKnown RBP13.12□□□□□ -0.31
ABCB1-205ENST00000482527 THOC2Q8NI27 1593 aaKnown RBP13.12□□□□□ -0.31
ABCB1-205ENST00000482527 AKNAQ7Z591 1439 aa13.12□□□□□ -0.31
ABCB1-205ENST00000482527 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
ABCB1-205ENST00000482527 CUL7Q14999 1698 aa13.11□□□□□ -0.31
ABCB1-205ENST00000482527 PLPPR3Q6T4P5 718 aa13.1□□□□□ -0.31
ABCB1-205ENST00000482527 ZBED9Q6R2W3 1325 aa13.1□□□□□ -0.31
ABCB1-205ENST00000482527 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
ABCB1-205ENST00000482527 PTPN23Q9H3S7 1636 aa13.09□□□□□ -0.31
ABCB1-205ENST00000482527 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.31
ABCB1-205ENST00000482527 NAIPQ13075 1403 aa13.08□□□□□ -0.32
ABCB1-205ENST00000482527 MYOM3Q5VTT5 1437 aa13.08□□□□□ -0.32
ABCB1-205ENST00000482527 MSH5O43196 834 aa13.08□□□□□ -0.32
ABCB1-205ENST00000482527 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
ABCB1-205ENST00000482527 CNTLNQ9NXG0 1405 aa13.07□□□□□ -0.32
ABCB1-205ENST00000482527 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
ABCB1-205ENST00000482527 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
ABCB1-205ENST00000482527 HSPA5P11021 654 aaKnown RBP13.04□□□□□ -0.32
ABCB1-205ENST00000482527 ARID4BQ4LE39 1312 aaPredicted RBP13.04□□□□□ -0.32
ABCB1-205ENST00000482527 FHOD3Q2V2M9 1422 aa13.04□□□□□ -0.32
ABCB1-205ENST00000482527 HIRIP3Q9BW71 556 aaPredicted RBP13.02□□□□□ -0.33
ABCB1-205ENST00000482527 PRKRIP1Q9H875 184 aaPredicted RBP13.02□□□□□ -0.33
ABCB1-205ENST00000482527 WASHC2AQ641Q2 1341 aa13.02□□□□□ -0.33
ABCB1-205ENST00000482527 MIA2Q96PC5 1412 aa13.02□□□□□ -0.33
ABCB1-205ENST00000482527 TCOF1Q13428 1488 aaKnown RBP13.02□□□□□ -0.33
ABCB1-205ENST00000482527 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.33
ABCB1-205ENST00000482527 SUPT6HQ7KZ85 1726 aaKnown RBP13.02□□□□□ -0.33
ABCB1-205ENST00000482527 CTTNBP2Q8WZ74 1663 aa13□□□□□ -0.33
ABCB1-205ENST00000482527 SNAPC4Q5SXM2 1469 aa13□□□□□ -0.33
ABCB1-205ENST00000482527 NCOA1Q15788 1441 aa13□□□□□ -0.33
ABCB1-205ENST00000482527 P3H3Q8IVL6 736 aa13□□□□□ -0.33
ABCB1-205ENST00000482527 NOP58Q9Y2X3 529 aaKnown RBP13□□□□□ -0.33
ABCB1-205ENST00000482527 CCDC7Q96M83 1385 aa12.99□□□□□ -0.33
ABCB1-205ENST00000482527 KDM5BQ9UGL1 1544 aa12.98□□□□□ -0.33
ABCB1-205ENST00000482527 SMG6Q86US8 1419 aaKnown RBP12.98□□□□□ -0.33
ABCB1-205ENST00000482527 ANP32AP39687 249 aaKnown RBP12.98□□□□□ -0.33
ABCB1-205ENST00000482527 MRS2Q9HD23 443 aa12.98□□□□□ -0.33
ABCB1-205ENST00000482527 HECW1Q76N89 1606 aa12.98□□□□□ -0.33
ABCB1-205ENST00000482527 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
ABCB1-205ENST00000482527 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
ABCB1-205ENST00000482527 PTPRKQ15262 1439 aa12.96□□□□□ -0.33
ABCB1-205ENST00000482527 ROCK1Q13464 1354 aa12.96□□□□□ -0.33
ABCB1-205ENST00000482527 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.33
ABCB1-205ENST00000482527 SAMD9Q5K651 1589 aa12.96□□□□□ -0.33
ABCB1-205ENST00000482527 MPHOSPH9Q99550 1183 aa12.96□□□□□ -0.33
ABCB1-205ENST00000482527 ARHGEF11O15085 1522 aa12.96□□□□□ -0.33
ABCB1-205ENST00000482527 UGGT2Q9NYU1 1516 aa12.96□□□□□ -0.33
ABCB1-205ENST00000482527 RNF123Q5XPI4 1314 aa12.95□□□□□ -0.34
ABCB1-205ENST00000482527 DEKP35659 375 aaKnown RBP12.95□□□□□ -0.34
ABCB1-205ENST00000482527 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
ABCB1-205ENST00000482527 GCC2Q8IWJ2 1684 aa12.94□□□□□ -0.34
ABCB1-205ENST00000482527 NESP48681 1621 aa12.93□□□□□ -0.34
ABCB1-205ENST00000482527 RTL5Q5HYW3 569 aaPredicted RBP12.93□□□□□ -0.34
ABCB1-205ENST00000482527 ROCK2O75116 1388 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms