RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 KIF21BO75037 1637 aa21.83■■□□□ 1.08
HDAC1-208ENST00000482310 PRXQ9BXM0 1461 aa21.83■■□□□ 1.08
HDAC1-208ENST00000482310 CYB5RLQ6IPT4 315 aa21.82■■□□□ 1.08
HDAC1-208ENST00000482310 CTTNBP2Q8WZ74 1663 aa21.82■■□□□ 1.08
HDAC1-208ENST00000482310 ARAP1Q96P48 1450 aa21.79■■□□□ 1.08
HDAC1-208ENST00000482310 NUP160Q12769 1436 aa21.74■■□□□ 1.07
HDAC1-208ENST00000482310 CLASP1Q7Z460 1538 aa21.74■■□□□ 1.07
HDAC1-208ENST00000482310 GOLGA3Q08378 1498 aa21.71■■□□□ 1.07
HDAC1-208ENST00000482310 IQGAP2Q13576 1575 aa21.67■■□□□ 1.06
HDAC1-208ENST00000482310 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.05
HDAC1-208ENST00000482310 KIAA0586Q9BVV6 1533 aa21.63■■□□□ 1.05
HDAC1-208ENST00000482310 SHROOM2Q13796 1616 aa21.61■■□□□ 1.05
HDAC1-208ENST00000482310 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
HDAC1-208ENST00000482310 TRHP20396 242 aaPredicted RBP21.58■■□□□ 1.05
HDAC1-208ENST00000482310 LOC105371045A0A1W2PR82 267 aa21.57■■□□□ 1.04
HDAC1-208ENST00000482310 ERCC6L2Q5T890 1561 aa21.57■■□□□ 1.04
HDAC1-208ENST00000482310 JPH4Q96JJ6 628 aa21.52■■□□□ 1.04
HDAC1-208ENST00000482310 PRG4Q92954 1404 aaPredicted RBP21.51■■□□□ 1.03
HDAC1-208ENST00000482310 UGGT2Q9NYU1 1516 aa21.49■■□□□ 1.03
HDAC1-208ENST00000482310 KIAA0556O60303 1618 aa21.47■■□□□ 1.03
HDAC1-208ENST00000482310 TTBK1Q5TCY1 1321 aaPredicted RBP21.45■■□□□ 1.02
HDAC1-208ENST00000482310 DISP1Q96F81 1524 aa21.43■■□□□ 1.02
HDAC1-208ENST00000482310 SAMD9Q5K651 1589 aa21.43■■□□□ 1.02
HDAC1-208ENST00000482310 P3H3Q8IVL6 736 aa21.42■■□□□ 1.02
HDAC1-208ENST00000482310 TNIKQ9UKE5 1360 aa21.42■■□□□ 1.02
HDAC1-208ENST00000482310 CARMIL2Q6F5E8 1435 aa21.4■■□□□ 1.02
HDAC1-208ENST00000482310 EFCAB5A4FU69 1503 aa21.36■■□□□ 1.01
HDAC1-208ENST00000482310 FHOD3Q2V2M9 1422 aa21.34■■□□□ 1.01
HDAC1-208ENST00000482310 CEP162Q5TB80 1403 aa21.33■■□□□ 1.01
HDAC1-208ENST00000482310 ARHGAP35Q9NRY4 1499 aa21.32■■□□□ 1
HDAC1-208ENST00000482310 CLIP1P30622 1438 aa21.32■■□□□ 1
HDAC1-208ENST00000482310 PTPRGP23470 1445 aa21.26■□□□□ 0.99
HDAC1-208ENST00000482310 ADCY10Q96PN6 1610 aa21.21■□□□□ 0.99
HDAC1-208ENST00000482310 RAPGEF6Q8TEU7 1601 aa21.19■□□□□ 0.98
HDAC1-208ENST00000482310 PLB1Q6P1J6 1458 aa21.19■□□□□ 0.98
HDAC1-208ENST00000482310 AEBP2Q6ZN18 517 aaPredicted RBP21.18■□□□□ 0.98
HDAC1-208ENST00000482310 ABCA8O94911 1581 aa21.16■□□□□ 0.98
HDAC1-208ENST00000482310 PCF11O94913 1555 aaKnown RBP21.16■□□□□ 0.98
HDAC1-208ENST00000482310 ABCC2Q92887 1545 aa21.14■□□□□ 0.97
HDAC1-208ENST00000482310 UACAQ9BZF9 1416 aa21.13■□□□□ 0.97
HDAC1-208ENST00000482310 LRRIQ1Q96JM4 1722 aa21.13■□□□□ 0.97
HDAC1-208ENST00000482310 ARID3CA6NKF2 412 aa21.13■□□□□ 0.97
HDAC1-208ENST00000482310 ATP1B4Q9UN42 357 aaPredicted RBP21.12■□□□□ 0.97
HDAC1-208ENST00000482310 FMN1Q68DA7 1419 aa21.12■□□□□ 0.97
HDAC1-208ENST00000482310 ZCCHC11Q5TAX3 1644 aaKnown RBP21.1■□□□□ 0.97
HDAC1-208ENST00000482310 HECW1Q76N89 1606 aa21.09■□□□□ 0.97
HDAC1-208ENST00000482310 UHRF1BP1LA0JNW5 1464 aa21.06■□□□□ 0.96
HDAC1-208ENST00000482310 KIF13AQ9H1H9 1805 aa21.05■□□□□ 0.96
HDAC1-208ENST00000482310 NUP153P49790 1475 aaKnown RBP21.04■□□□□ 0.96
HDAC1-208ENST00000482310 CDK13Q14004 1512 aaKnown RBP21.02■□□□□ 0.96
HDAC1-208ENST00000482310 VPS8Q8N3P4 1428 aa21.01■□□□□ 0.95
HDAC1-208ENST00000482310 CASKIN1Q8WXD9 1431 aa21.01■□□□□ 0.95
HDAC1-208ENST00000482310 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
HDAC1-208ENST00000482310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
HDAC1-208ENST00000482310 NPM1P06748 294 aaKnown RBP eCLIP20.99■□□□□ 0.95
HDAC1-208ENST00000482310 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
HDAC1-208ENST00000482310 KDM5BQ9UGL1 1544 aa20.98■□□□□ 0.95
HDAC1-208ENST00000482310 EPRSP07814 1512 aaKnown RBP20.96■□□□□ 0.95
HDAC1-208ENST00000482310 ATP10BO94823 1461 aa20.95■□□□□ 0.94
HDAC1-208ENST00000482310 CFAP43Q8NDM7 1665 aa20.94■□□□□ 0.94
HDAC1-208ENST00000482310 CCDC18Q5T9S5 1454 aa20.91■□□□□ 0.94
HDAC1-208ENST00000482310 MAPKBP1O60336 1514 aa20.89■□□□□ 0.94
HDAC1-208ENST00000482310 ASXL2Q76L83 1435 aa20.89■□□□□ 0.94
HDAC1-208ENST00000482310 TIAM1Q13009 1591 aa20.86■□□□□ 0.93
HDAC1-208ENST00000482310 ABCC10Q5T3U5 1492 aa20.86■□□□□ 0.93
HDAC1-208ENST00000482310 WDR7Q9Y4E6 1490 aa20.84■□□□□ 0.93
HDAC1-208ENST00000482310 TSPOAP1O95153 1857 aa20.84■□□□□ 0.93
HDAC1-208ENST00000482310 FAM69CQ0P6D2 419 aa20.83■□□□□ 0.93
HDAC1-208ENST00000482310 DIP2BQ9P265 1576 aa20.83■□□□□ 0.92
HDAC1-208ENST00000482310 MAGI3Q5TCQ9 1506 aa20.83■□□□□ 0.92
HDAC1-208ENST00000482310 KCNH8Q96L42 1107 aa20.81■□□□□ 0.92
HDAC1-208ENST00000482310 KIF14Q15058 1648 aa20.81■□□□□ 0.92
HDAC1-208ENST00000482310 APLP2Q06481 763 aa20.79■□□□□ 0.92
HDAC1-208ENST00000482310 PLEKHD1A6NEE1 506 aa20.78■□□□□ 0.92
HDAC1-208ENST00000482310 MTUS2Q5JR59 1369 aa20.75■□□□□ 0.91
HDAC1-208ENST00000482310 EHBP1L1Q8N3D4 1523 aa20.75■□□□□ 0.91
HDAC1-208ENST00000482310 CDK11AQ9UQ88 783 aaPredicted RBP20.75■□□□□ 0.91
HDAC1-208ENST00000482310 TROQ12816 1431 aaPredicted RBP20.74■□□□□ 0.91
HDAC1-208ENST00000482310 TTC37Q6PGP7 1564 aa20.74■□□□□ 0.91
HDAC1-208ENST00000482310 SUPT6HQ7KZ85 1726 aaKnown RBP20.73■□□□□ 0.91
HDAC1-208ENST00000482310 PPARGC1BQ86YN6 1023 aaKnown RBP20.72■□□□□ 0.91
HDAC1-208ENST00000482310 MAP3K1Q13233 1512 aa20.71■□□□□ 0.91
HDAC1-208ENST00000482310 MAP3K4Q9Y6R4 1608 aa20.71■□□□□ 0.91
HDAC1-208ENST00000482310 MYO5CQ9NQX4 1742 aa20.7■□□□□ 0.9
HDAC1-208ENST00000482310 LRRC9Q6ZRR7 1453 aa20.7■□□□□ 0.9
HDAC1-208ENST00000482310 KANK4Q5T7N3 995 aaPredicted RBP20.7■□□□□ 0.9
HDAC1-208ENST00000482310 ABCA9Q8IUA7 1624 aa20.7■□□□□ 0.9
HDAC1-208ENST00000482310 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.69■□□□□ 0.9
HDAC1-208ENST00000482310 GLI2P10070 1586 aa20.68■□□□□ 0.9
HDAC1-208ENST00000482310 CDC42BPAQ5VT25 1732 aa20.67■□□□□ 0.9
HDAC1-208ENST00000482310 KDM4FA0A1W2PPD8 638 aa20.66■□□□□ 0.9
HDAC1-208ENST00000482310 PPRC1Q5VV67 1664 aaKnown RBP20.65■□□□□ 0.9
HDAC1-208ENST00000482310 KDM6BO15054 1643 aa20.65■□□□□ 0.9
HDAC1-208ENST00000482310 CDC42BPBQ9Y5S2 1711 aa20.63■□□□□ 0.89
HDAC1-208ENST00000482310 ITSN2Q9NZM3 1697 aa20.61■□□□□ 0.89
HDAC1-208ENST00000482310 NCOA2Q15596 1464 aa20.61■□□□□ 0.89
HDAC1-208ENST00000482310 PREX2Q70Z35 1606 aa20.6■□□□□ 0.89
HDAC1-208ENST00000482310 CD109Q6YHK3 1445 aa20.6■□□□□ 0.89
HDAC1-208ENST00000482310 ARHGAP5Q13017 1502 aa20.56■□□□□ 0.88
HDAC1-208ENST00000482310 CCNB3Q8WWL7 1395 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms