RNA–Protein interactions for RNA: ENST00000482243.1

TRAIP-207, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-207ENST00000482243 CHMP7Q8WUX9 453 aaPredicted RBP22.2■■□□□ 1.14
TRAIP-207ENST00000482243 GRIN2AQ12879 1464 aa22.17■■□□□ 1.14
TRAIP-207ENST00000482243 FBLN2P98095 1184 aa22.16■■□□□ 1.14
TRAIP-207ENST00000482243 ARHGAP35Q9NRY4 1499 aa22.11■■□□□ 1.13
TRAIP-207ENST00000482243 ARAP1Q96P48 1450 aa22.08■■□□□ 1.12
TRAIP-207ENST00000482243 IQGAP2Q13576 1575 aa22.07■■□□□ 1.12
TRAIP-207ENST00000482243 VPS8Q8N3P4 1428 aa22.06■■□□□ 1.12
TRAIP-207ENST00000482243 EFCAB5A4FU69 1503 aa22.06■■□□□ 1.12
TRAIP-207ENST00000482243 KIAA0586Q9BVV6 1533 aa22.05■■□□□ 1.12
TRAIP-207ENST00000482243 CHD1O14646 1710 aa22.03■■□□□ 1.12
TRAIP-207ENST00000482243 CEP170Q5SW79 1584 aa22.03■■□□□ 1.12
TRAIP-207ENST00000482243 NUP160Q12769 1436 aa22.01■■□□□ 1.11
TRAIP-207ENST00000482243 P3H3Q8IVL6 736 aa22.01■■□□□ 1.11
TRAIP-207ENST00000482243 SAMD9Q5K651 1589 aa21.98■■□□□ 1.11
TRAIP-207ENST00000482243 UGGT2Q9NYU1 1516 aa21.96■■□□□ 1.11
TRAIP-207ENST00000482243 FHOD3Q2V2M9 1422 aa21.95■■□□□ 1.1
TRAIP-207ENST00000482243 APLP2Q06481 763 aa21.93■■□□□ 1.1
TRAIP-207ENST00000482243 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.09
TRAIP-207ENST00000482243 JPH4Q96JJ6 628 aa21.88■■□□□ 1.09
TRAIP-207ENST00000482243 FMN1Q68DA7 1419 aa21.86■■□□□ 1.09
TRAIP-207ENST00000482243 DISP1Q96F81 1524 aa21.84■■□□□ 1.09
TRAIP-207ENST00000482243 KIAA0556O60303 1618 aa21.84■■□□□ 1.09
TRAIP-207ENST00000482243 CARMIL2Q6F5E8 1435 aa21.81■■□□□ 1.08
TRAIP-207ENST00000482243 PCF11O94913 1555 aaKnown RBP21.8■■□□□ 1.08
TRAIP-207ENST00000482243 ATP1B4Q9UN42 357 aaPredicted RBP21.8■■□□□ 1.08
TRAIP-207ENST00000482243 CASKIN1Q8WXD9 1431 aa21.79■■□□□ 1.08
TRAIP-207ENST00000482243 FYCO1Q9BQS8 1478 aa21.77■■□□□ 1.08
TRAIP-207ENST00000482243 TRIM26Q12899 539 aaPredicted RBP21.76■■□□□ 1.07
TRAIP-207ENST00000482243 TTBK1Q5TCY1 1321 aaPredicted RBP21.76■■□□□ 1.07
TRAIP-207ENST00000482243 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
TRAIP-207ENST00000482243 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
TRAIP-207ENST00000482243 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
TRAIP-207ENST00000482243 MAP3K1Q13233 1512 aa21.72■■□□□ 1.07
TRAIP-207ENST00000482243 TIAM1Q13009 1591 aa21.7■■□□□ 1.06
TRAIP-207ENST00000482243 PCGF6Q9BYE7 350 aa21.69■■□□□ 1.06
TRAIP-207ENST00000482243 OSCARQ8IYS5 282 aa21.68■■□□□ 1.06
TRAIP-207ENST00000482243 CFAP43Q8NDM7 1665 aa21.66■■□□□ 1.06
TRAIP-207ENST00000482243 KANK4Q5T7N3 995 aaPredicted RBP21.66■■□□□ 1.06
TRAIP-207ENST00000482243 HECW1Q76N89 1606 aa21.66■■□□□ 1.06
TRAIP-207ENST00000482243 RAPGEF6Q8TEU7 1601 aa21.62■■□□□ 1.05
TRAIP-207ENST00000482243 LRRIQ1Q96JM4 1722 aa21.61■■□□□ 1.05
TRAIP-207ENST00000482243 PTPRGP23470 1445 aa21.61■■□□□ 1.05
TRAIP-207ENST00000482243 CCDC18Q5T9S5 1454 aa21.6■■□□□ 1.05
TRAIP-207ENST00000482243 LRRC9Q6ZRR7 1453 aa21.59■■□□□ 1.05
TRAIP-207ENST00000482243 ERCC6L2Q5T890 1561 aa21.58■■□□□ 1.05
TRAIP-207ENST00000482243 PLB1Q6P1J6 1458 aa21.57■■□□□ 1.04
TRAIP-207ENST00000482243 EPRSP07814 1512 aaKnown RBP21.56■■□□□ 1.04
TRAIP-207ENST00000482243 ABCA8O94911 1581 aa21.54■■□□□ 1.04
TRAIP-207ENST00000482243 NUP153P49790 1475 aaKnown RBP21.53■■□□□ 1.04
TRAIP-207ENST00000482243 MTUS2Q5JR59 1369 aa21.52■■□□□ 1.04
TRAIP-207ENST00000482243 ARID3CA6NKF2 412 aa21.52■■□□□ 1.04
TRAIP-207ENST00000482243 CDK13Q14004 1512 aaKnown RBP21.51■■□□□ 1.03
TRAIP-207ENST00000482243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.49■■□□□ 1.03
TRAIP-207ENST00000482243 HNRNPUL2Q1KMD3 747 aaKnown RBP21.49■■□□□ 1.03
TRAIP-207ENST00000482243 UACAQ9BZF9 1416 aa21.46■■□□□ 1.03
TRAIP-207ENST00000482243 EHBP1L1Q8N3D4 1523 aa21.46■■□□□ 1.03
TRAIP-207ENST00000482243 CDK11AQ9UQ88 783 aaPredicted RBP21.45■■□□□ 1.02
TRAIP-207ENST00000482243 MAGI3Q5TCQ9 1506 aa21.42■■□□□ 1.02
TRAIP-207ENST00000482243 SUPT6HQ7KZ85 1726 aaKnown RBP21.42■■□□□ 1.02
TRAIP-207ENST00000482243 ATP10BO94823 1461 aa21.39■■□□□ 1.02
TRAIP-207ENST00000482243 ABCC2Q92887 1545 aa21.39■■□□□ 1.01
TRAIP-207ENST00000482243 PHLDB1Q86UU1 1377 aa21.37■■□□□ 1.01
TRAIP-207ENST00000482243 NCOA2Q15596 1464 aa21.36■■□□□ 1.01
TRAIP-207ENST00000482243 RRBP1Q9P2E9 1410 aaKnown RBP21.36■■□□□ 1.01
TRAIP-207ENST00000482243 UHRF1BP1LA0JNW5 1464 aa21.35■■□□□ 1.01
TRAIP-207ENST00000482243 PLEKHD1A6NEE1 506 aa21.34■■□□□ 1.01
TRAIP-207ENST00000482243 TROQ12816 1431 aaPredicted RBP21.34■■□□□ 1.01
TRAIP-207ENST00000482243 CCNB3Q8WWL7 1395 aa21.33■■□□□ 1
TRAIP-207ENST00000482243 ARHGEF11O15085 1522 aa21.3■■□□□ 1
TRAIP-207ENST00000482243 MYOM3Q5VTT5 1437 aa21.28■■□□□ 1
TRAIP-207ENST00000482243 ZCCHC11Q5TAX3 1644 aaKnown RBP21.26■□□□□ 0.99
TRAIP-207ENST00000482243 ADCY10Q96PN6 1610 aa21.26■□□□□ 0.99
TRAIP-207ENST00000482243 KDM5BQ9UGL1 1544 aa21.25■□□□□ 0.99
TRAIP-207ENST00000482243 FAM50AQ14320 339 aaKnown RBP21.25■□□□□ 0.99
TRAIP-207ENST00000482243 FGD6Q6ZV73 1430 aa21.25■□□□□ 0.99
TRAIP-207ENST00000482243 KIF14Q15058 1648 aa21.22■□□□□ 0.99
TRAIP-207ENST00000482243 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
TRAIP-207ENST00000482243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.2■□□□□ 0.98
TRAIP-207ENST00000482243 RIMBP3CA6NJZ7 1639 aa21.19■□□□□ 0.98
TRAIP-207ENST00000482243 RIMBP3BA6NNM3 1639 aa21.19■□□□□ 0.98
TRAIP-207ENST00000482243 RIMBP3Q9UFD9 1639 aa21.19■□□□□ 0.98
TRAIP-207ENST00000482243 NPM1P06748 294 aaKnown RBP eCLIP21.17■□□□□ 0.98
TRAIP-207ENST00000482243 ITGAEP38570 1179 aa21.17■□□□□ 0.98
TRAIP-207ENST00000482243 MIA2Q96PC5 1412 aa21.17■□□□□ 0.98
TRAIP-207ENST00000482243 PTPN23Q9H3S7 1636 aa21.17■□□□□ 0.98
TRAIP-207ENST00000482243 ITSN2Q9NZM3 1697 aa21.15■□□□□ 0.98
TRAIP-207ENST00000482243 ABCC10Q5T3U5 1492 aa21.13■□□□□ 0.97
TRAIP-207ENST00000482243 TCOF1Q13428 1488 aaKnown RBP21.13■□□□□ 0.97
TRAIP-207ENST00000482243 KCNH8Q96L42 1107 aa21.12■□□□□ 0.97
TRAIP-207ENST00000482243 GPATCH8Q9UKJ3 1502 aaKnown RBP21.12■□□□□ 0.97
TRAIP-207ENST00000482243 CYB5RLQ6IPT4 315 aa21.11■□□□□ 0.97
TRAIP-207ENST00000482243 CFDP1Q9UEE9 299 aaPredicted RBP21.11■□□□□ 0.97
TRAIP-207ENST00000482243 CDC42BPAQ5VT25 1732 aa21.09■□□□□ 0.97
TRAIP-207ENST00000482243 WDR7Q9Y4E6 1490 aa21.07■□□□□ 0.96
TRAIP-207ENST00000482243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.06■□□□□ 0.96
TRAIP-207ENST00000482243 ASXL2Q76L83 1435 aa21.05■□□□□ 0.96
TRAIP-207ENST00000482243 ZNF777Q9ULD5 760 aaPredicted RBP21.04■□□□□ 0.96
TRAIP-207ENST00000482243 TTC37Q6PGP7 1564 aa21.04■□□□□ 0.96
TRAIP-207ENST00000482243 ZNF644Q9H582 1327 aaPredicted RBP21.03■□□□□ 0.96
TRAIP-207ENST00000482243 PREX2Q70Z35 1606 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms