RNA–Protein interactions for RNA: ENST00000482125.1

FXR1-216, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5

Gene FXR1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-216ENST00000482125 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
FXR1-216ENST00000482125 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
FXR1-216ENST00000482125 NPM1P06748 294 aaKnown RBP eCLIP17.14■□□□□ 0.33
FXR1-216ENST00000482125 GRIN2AQ12879 1464 aa17.13■□□□□ 0.33
FXR1-216ENST00000482125 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
FXR1-216ENST00000482125 COL17A1Q9UMD9 1497 aaPredicted RBP17.12■□□□□ 0.33
FXR1-216ENST00000482125 PPRC1Q5VV67 1664 aaKnown RBP17.12■□□□□ 0.33
FXR1-216ENST00000482125 ADCY10Q96PN6 1610 aa17.1■□□□□ 0.33
FXR1-216ENST00000482125 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
FXR1-216ENST00000482125 CERKQ8TCT0 537 aa17.08■□□□□ 0.32
FXR1-216ENST00000482125 PRG4Q92954 1404 aaPredicted RBP17.05■□□□□ 0.32
FXR1-216ENST00000482125 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
FXR1-216ENST00000482125 PCF11O94913 1555 aaKnown RBP16.97■□□□□ 0.31
FXR1-216ENST00000482125 GLI2P10070 1586 aa16.96■□□□□ 0.31
FXR1-216ENST00000482125 ADAMTS12P58397 1594 aa16.96■□□□□ 0.31
FXR1-216ENST00000482125 PTPRMP28827 1452 aa16.91■□□□□ 0.3
FXR1-216ENST00000482125 CUX1P39880 1505 aa16.91■□□□□ 0.3
FXR1-216ENST00000482125 JPH4Q96JJ6 628 aa16.9■□□□□ 0.3
FXR1-216ENST00000482125 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
FXR1-216ENST00000482125 KIF21BO75037 1637 aa16.82■□□□□ 0.28
FXR1-216ENST00000482125 TEX14Q8IWB6 1497 aa16.82■□□□□ 0.28
FXR1-216ENST00000482125 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
FXR1-216ENST00000482125 ADAMTSL3P82987 1691 aa16.81■□□□□ 0.28
FXR1-216ENST00000482125 MAP3K4Q9Y6R4 1608 aa16.81■□□□□ 0.28
FXR1-216ENST00000482125 ASXL2Q76L83 1435 aa16.8■□□□□ 0.28
FXR1-216ENST00000482125 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
FXR1-216ENST00000482125 RUSC2Q8N2Y8 1516 aa16.75■□□□□ 0.27
FXR1-216ENST00000482125 HSPA2P54652 639 aa16.75■□□□□ 0.27
FXR1-216ENST00000482125 ABCC2Q92887 1545 aa16.73■□□□□ 0.27
FXR1-216ENST00000482125 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
FXR1-216ENST00000482125 KIAA0586Q9BVV6 1533 aa16.69■□□□□ 0.26
FXR1-216ENST00000482125 MADDQ8WXG6 1647 aa16.63■□□□□ 0.25
FXR1-216ENST00000482125 CUL7Q14999 1698 aa16.62■□□□□ 0.25
FXR1-216ENST00000482125 ERICH3Q5RHP9 1530 aa16.6■□□□□ 0.25
FXR1-216ENST00000482125 BCORL1Q5H9F3 1711 aa16.59■□□□□ 0.25
FXR1-216ENST00000482125 PTPRGP23470 1445 aa16.58■□□□□ 0.24
FXR1-216ENST00000482125 UHRF1BP1LA0JNW5 1464 aa16.54■□□□□ 0.24
FXR1-216ENST00000482125 MAGI3Q5TCQ9 1506 aa16.53■□□□□ 0.24
FXR1-216ENST00000482125 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
FXR1-216ENST00000482125 RIMS1Q86UR5 1692 aaKnown RBP16.5■□□□□ 0.23
FXR1-216ENST00000482125 IQSEC2Q5JU85 1478 aa16.5■□□□□ 0.23
FXR1-216ENST00000482125 KDM5BQ9UGL1 1544 aa16.49■□□□□ 0.23
FXR1-216ENST00000482125 WRNQ14191 1432 aaPredicted RBP eCLIP16.46■□□□□ 0.23
FXR1-216ENST00000482125 YEATS2Q9ULM3 1422 aa16.45■□□□□ 0.22
FXR1-216ENST00000482125 LTBP4Q8N2S1 1624 aa16.45■□□□□ 0.22
FXR1-216ENST00000482125 ARAP3Q8WWN8 1544 aa16.45■□□□□ 0.22
FXR1-216ENST00000482125 STRCQ7RTU9 1775 aa16.44■□□□□ 0.22
FXR1-216ENST00000482125 CD109Q6YHK3 1445 aa16.44■□□□□ 0.22
FXR1-216ENST00000482125 TNIKQ9UKE5 1360 aa16.43■□□□□ 0.22
FXR1-216ENST00000482125 UACAQ9BZF9 1416 aa16.43■□□□□ 0.22
FXR1-216ENST00000482125 TTBK1Q5TCY1 1321 aaPredicted RBP16.43■□□□□ 0.22
FXR1-216ENST00000482125 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
FXR1-216ENST00000482125 CFAP43Q8NDM7 1665 aa16.42■□□□□ 0.22
FXR1-216ENST00000482125 ZCCHC11Q5TAX3 1644 aaKnown RBP16.41■□□□□ 0.22
FXR1-216ENST00000482125 WDR7Q9Y4E6 1490 aa16.4■□□□□ 0.22
FXR1-216ENST00000482125 ARID4BQ4LE39 1312 aaPredicted RBP16.36■□□□□ 0.21
FXR1-216ENST00000482125 PLPPR3Q6T4P5 718 aa16.34■□□□□ 0.21
FXR1-216ENST00000482125 PTPRTO14522 1441 aa16.34■□□□□ 0.21
FXR1-216ENST00000482125 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
FXR1-216ENST00000482125 PREX1Q8TCU6 1659 aa16.3■□□□□ 0.2
FXR1-216ENST00000482125 UBAP1LF5GYI3 381 aa16.27■□□□□ 0.2
FXR1-216ENST00000482125 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
FXR1-216ENST00000482125 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
FXR1-216ENST00000482125 FRMPD1Q5SYB0 1578 aa16.26■□□□□ 0.19
FXR1-216ENST00000482125 RAPGEF3O95398 923 aa16.25■□□□□ 0.19
FXR1-216ENST00000482125 BIVM-ERCC5R4GMW8 1640 aa16.24■□□□□ 0.19
FXR1-216ENST00000482125 ARHGEF40Q8TER5 1519 aa16.24■□□□□ 0.19
FXR1-216ENST00000482125 HSPA1LP34931 641 aa16.22■□□□□ 0.19
FXR1-216ENST00000482125 PHLDB1Q86UU1 1377 aa16.22■□□□□ 0.19
FXR1-216ENST00000482125 KCNH8Q96L42 1107 aa16.19■□□□□ 0.18
FXR1-216ENST00000482125 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
FXR1-216ENST00000482125 POGZQ7Z3K3 1410 aa16.18■□□□□ 0.18
FXR1-216ENST00000482125 FER1L4A9Z1Z3 1794 aa16.17■□□□□ 0.18
FXR1-216ENST00000482125 SIGLEC1Q9BZZ2 1709 aa16.16■□□□□ 0.18
FXR1-216ENST00000482125 FANCAO15360 1455 aa16.15■□□□□ 0.18
FXR1-216ENST00000482125 UHRF1BP1Q6BDS2 1440 aa16.13■□□□□ 0.17
FXR1-216ENST00000482125 NEO1Q92859 1461 aa16.1■□□□□ 0.17
FXR1-216ENST00000482125 IQGAP2Q13576 1575 aa16.1■□□□□ 0.17
FXR1-216ENST00000482125 RGS17Q9UGC6 210 aaPredicted RBP16.09■□□□□ 0.17
FXR1-216ENST00000482125 SRCAPQ6ZRS2 3230 aa16.07■□□□□ 0.16
FXR1-216ENST00000482125 ARHGEF12Q9NZN5 1544 aa16.06■□□□□ 0.16
FXR1-216ENST00000482125 NCOA1Q15788 1441 aa16.06■□□□□ 0.16
FXR1-216ENST00000482125 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
FXR1-216ENST00000482125 CEBPAP49715 358 aaPredicted RBP16.06■□□□□ 0.16
FXR1-216ENST00000482125 AKNAQ7Z591 1439 aa16.05■□□□□ 0.16
FXR1-216ENST00000482125 IGF1RP08069 1367 aa16.05■□□□□ 0.16
FXR1-216ENST00000482125 ABCA9Q8IUA7 1624 aa16.05■□□□□ 0.16
FXR1-216ENST00000482125 SETD1BQ9UPS6 1966 aaKnown RBP16.04■□□□□ 0.16
FXR1-216ENST00000482125 MLECQ14165 292 aa16.03■□□□□ 0.16
FXR1-216ENST00000482125 RICTORQ6R327 1708 aa16.02■□□□□ 0.15
FXR1-216ENST00000482125 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
FXR1-216ENST00000482125 KIAA0556O60303 1618 aa16■□□□□ 0.15
FXR1-216ENST00000482125 PIP4K2BP78356 416 aa15.99■□□□□ 0.15
FXR1-216ENST00000482125 UGGT2Q9NYU1 1516 aa15.99■□□□□ 0.15
FXR1-216ENST00000482125 FHOD3Q2V2M9 1422 aa15.98■□□□□ 0.15
FXR1-216ENST00000482125 ZMYM4Q5VZL5 1548 aa15.98■□□□□ 0.15
FXR1-216ENST00000482125 ZFYVE16Q7Z3T8 1539 aa15.97■□□□□ 0.15
FXR1-216ENST00000482125 ABCA8O94911 1581 aa15.96■□□□□ 0.15
FXR1-216ENST00000482125 DENND4BO75064 1496 aaPredicted RBP15.96■□□□□ 0.14
FXR1-216ENST00000482125 EFCAB5A4FU69 1503 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms